RNA–Protein interactions for RNA: YOR108W

LEU9, Transcript of Alpha-isopropylmalate synthase II (2-isopropylmalate synthase), yeastyeast

Gene LEU9, Length 1,815 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LEU9YOR108W TY1B-GR1Q12141 1755 aa13.79□□□□□ -0.2
LEU9YOR108W TY1B-BLQ12490 1755 aa13.79□□□□□ -0.2
LEU9YOR108W RPA190P10964 1664 aaKnown RBP13.78□□□□□ -0.2
LEU9YOR108W ULS1Q08562 1619 aa13.78□□□□□ -0.2
LEU9YOR108W GEA1P47102 1408 aaPredicted RBP13.78□□□□□ -0.2
LEU9YOR108W SNT2P53127 1403 aa13.78□□□□□ -0.2
LEU9YOR108W IKI3Q06706 1349 aaKnown RBP13.72□□□□□ -0.21
LEU9YOR108W NTE1Q04958 1679 aa13.69□□□□□ -0.22
LEU9YOR108W NUP159P40477 1460 aa13.68□□□□□ -0.22
LEU9YOR108W RPO21P04050 1733 aaKnown RBP13.65□□□□□ -0.22
LEU9YOR108W GEA2P39993 1459 aaKnown RBP13.64□□□□□ -0.23
LEU9YOR108W MET5P47169 1442 aa13.6□□□□□ -0.23
LEU9YOR108W MET10P39692 1035 aa13.59□□□□□ -0.23
LEU9YOR108W VPS15P22219 1454 aa13.59□□□□□ -0.23
LEU9YOR108W TY3B-GQ99315 1547 aa13.58□□□□□ -0.24
LEU9YOR108W SSM4P40318 1319 aa13.56□□□□□ -0.24
LEU9YOR108W IRC20Q06554 1556 aa13.54□□□□□ -0.24
LEU9YOR108W CAT8P39113 1433 aa13.51□□□□□ -0.25
LEU9YOR108W NUP170P38181 1502 aa13.5□□□□□ -0.25
LEU9YOR108W YRF1-1P0CX20 1796 aa13.5□□□□□ -0.25
LEU9YOR108W YRF1-5P0CX21 1796 aa13.5□□□□□ -0.25
LEU9YOR108W YRF1-8P0CX22 1796 aa13.5□□□□□ -0.25
LEU9YOR108W CKB1P43639 278 aa13.48□□□□□ -0.25
LEU9YOR108W YBT1P32386 1661 aa13.47□□□□□ -0.25
LEU9YOR108W NUP157P40064 1391 aaKnown RBP13.47□□□□□ -0.25
LEU9YOR108W SPO14P36126 1683 aa13.44□□□□□ -0.26
LEU9YOR108W PDR12Q02785 1511 aa13.43□□□□□ -0.26
LEU9YOR108W PDR10P51533 1564 aa13.43□□□□□ -0.26
LEU9YOR108W GDB1Q06625 1536 aa13.42□□□□□ -0.26
LEU9YOR108W SRB8P25648 1427 aa13.36□□□□□ -0.27
LEU9YOR108W ARO1P08566 1588 aaKnown RBP13.35□□□□□ -0.27
LEU9YOR108W BUD3P25558 1636 aa13.31□□□□□ -0.28
LEU9YOR108W LTE1P07866 1435 aa13.3□□□□□ -0.28
LEU9YOR108W BUD21Q08492 214 aaPredicted RBP13.29□□□□□ -0.28
LEU9YOR108W IQG1Q12280 1495 aa13.28□□□□□ -0.28
LEU9YOR108W YSP2Q06681 1438 aa13.25□□□□□ -0.29
LEU9YOR108W DRS2P39524 1355 aa13.19□□□□□ -0.3
LEU9YOR108W MMS1Q06211 1407 aa13.18□□□□□ -0.3
LEU9YOR108W BNR1P40450 1375 aa13.18□□□□□ -0.3
LEU9YOR108W ITT1Q04638 464 aa13.14□□□□□ -0.31
LEU9YOR108W SEC7P11075 2009 aaKnown RBP13.07□□□□□ -0.32
LEU9YOR108W GCN2P15442 1659 aa13.06□□□□□ -0.32
LEU9YOR108W TRM3Q07527 1436 aa13.05□□□□□ -0.32
LEU9YOR108W NOP7P53261 605 aaKnown RBP13.04□□□□□ -0.32
LEU9YOR108W DOP1Q03921 1698 aa13.03□□□□□ -0.32
LEU9YOR108W BNI1P41832 1953 aa13□□□□□ -0.33
LEU9YOR108W PAF1P38351 445 aa13□□□□□ -0.33
LEU9YOR108W CHC1P22137 1653 aaKnown RBP12.96□□□□□ -0.33
LEU9YOR108W POL5P39985 1022 aaKnown RBP12.93□□□□□ -0.34
LEU9YOR108W BFR2Q06631 534 aaKnown RBP12.92□□□□□ -0.34
LEU9YOR108W YOR093CQ12275 1648 aa12.9□□□□□ -0.34
LEU9YOR108W PDR5P33302 1511 aaKnown RBP12.87□□□□□ -0.35
LEU9YOR108W URN1Q06525 465 aaKnown RBP12.84□□□□□ -0.35
LEU9YOR108W PDR11P40550 1411 aa12.84□□□□□ -0.35
LEU9YOR108W VMR1P38735 1592 aa12.83□□□□□ -0.36
LEU9YOR108W NUP188P52593 1655 aaKnown RBP12.82□□□□□ -0.36
LEU9YOR108W ORC1P54784 914 aaPredicted RBP12.81□□□□□ -0.36
LEU9YOR108W RAV1P47104 1357 aa12.81□□□□□ -0.36
LEU9YOR108W IML1P47170 1584 aa12.8□□□□□ -0.36
LEU9YOR108W TYS1P36421 394 aaKnown RBP12.8□□□□□ -0.36
LEU9YOR108W IPL1P38991 367 aa12.8□□□□□ -0.36
LEU9YOR108W RTC1Q08281 1341 aa12.78□□□□□ -0.36
LEU9YOR108W DNF2Q12675 1612 aa12.77□□□□□ -0.36
LEU9YOR108W YAP3P38749 330 aa12.76□□□□□ -0.37
LEU9YOR108W TAF5P38129 798 aa12.75□□□□□ -0.37
LEU9YOR108W ABP1P15891 592 aaKnown RBP12.69□□□□□ -0.38
LEU9YOR108W ESL2P36168 1195 aa12.69□□□□□ -0.38
LEU9YOR108W KIP3P53086 805 aaKnown RBP12.64□□□□□ -0.39
LEU9YOR108W TY3B-IQ7LHG5 1498 aaKnown RBP12.59□□□□□ -0.39
LEU9YOR108W NUP192P47054 1683 aa12.59□□□□□ -0.39
LEU9YOR108W RAD9P14737 1309 aa12.57□□□□□ -0.4
LEU9YOR108W SPT7P35177 1332 aa12.57□□□□□ -0.4
LEU9YOR108W ALD4P46367 519 aaKnown RBP12.57□□□□□ -0.4
LEU9YOR108W MHP1P43638 1398 aa12.56□□□□□ -0.4
LEU9YOR108W SEC3P33332 1336 aaKnown RBP12.56□□□□□ -0.4
LEU9YOR108W TAF8Q03750 510 aa12.55□□□□□ -0.4
LEU9YOR108W CAB1Q04430 367 aa12.55□□□□□ -0.4
LEU9YOR108W SPE2P21182 396 aa12.53□□□□□ -0.4
LEU9YOR108W DNF3Q12674 1656 aa12.52□□□□□ -0.4
LEU9YOR108W YLR419WQ06698 1435 aaKnown RBP12.52□□□□□ -0.41
LEU9YOR108W LEU3P08638 886 aa12.52□□□□□ -0.41
LEU9YOR108W NSR1P27476 414 aaKnown RBP RIP-Chip data12.52□□□□□ -0.41not detected
LEU9YOR108W MRX12P47084 519 aa12.51□□□□□ -0.41
LEU9YOR108W MAK10Q02197 733 aa12.51□□□□□ -0.41
LEU9YOR108W PDS5Q04264 1277 aa12.49□□□□□ -0.41
LEU9YOR108W NAP1P25293 417 aaKnown RBP12.48□□□□□ -0.41
LEU9YOR108W PSD2P53037 1138 aaKnown RBP12.48□□□□□ -0.41
LEU9YOR108W BCK1Q01389 1478 aa12.48□□□□□ -0.41
LEU9YOR108W KRE5P22023 1365 aa12.47□□□□□ -0.41
LEU9YOR108W SCT1P32784 759 aa12.47□□□□□ -0.41
LEU9YOR108W ENP1P38333 483 aaKnown RBP12.46□□□□□ -0.41
LEU9YOR108W HAP1P0CE41 1502 aa12.45□□□□□ -0.42
LEU9YOR108W RIA1P53893 1110 aa12.45□□□□□ -0.42
LEU9YOR108W CHZ1P40019 153 aaPredicted RBP12.44□□□□□ -0.42
LEU9YOR108W RTG3P38165 486 aa12.36□□□□□ -0.43
LEU9YOR108W NST1P53935 1240 aa12.34□□□□□ -0.43
LEU9YOR108W RCM1P53972 490 aa12.34□□□□□ -0.43
LEU9YOR108W CFT1Q06632 1357 aaKnown RBP12.33□□□□□ -0.43
LEU9YOR108W FKH1P40466 484 aa12.3□□□□□ -0.44
LEU9YOR108W YNR029CP53729 429 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms