RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI2YOL117W DCW1P36091 449 aa6.18□□□□□ -1.42
RRI2YOL117W ULI1P43604 169 aa6.18□□□□□ -1.42
RRI2YOL117W TRP5P00931 707 aaKnown RBP6.17□□□□□ -1.42
RRI2YOL117W HTA1P04911 132 aaKnown RBP6.17□□□□□ -1.42
RRI2YOL117W HTA2P04912 132 aa6.17□□□□□ -1.42
RRI2YOL117W CKB1P43639 278 aa6.15□□□□□ -1.42
RRI2YOL117W YGR273CP53329 174 aa6.15□□□□□ -1.42
RRI2YOL117W UBP14P38237 781 aaKnown RBP6.13□□□□□ -1.43
RRI2YOL117W YEL023CP39992 682 aa6.13□□□□□ -1.43
RRI2YOL117W DAN4P47179 1161 aa6.13□□□□□ -1.43
RRI2YOL117W PTC4P38089 393 aa6.12□□□□□ -1.43
RRI2YOL117W REF2P42073 533 aaPredicted RBP6.11□□□□□ -1.43
RRI2YOL117W LDB19Q12502 818 aa6.11□□□□□ -1.43
RRI2YOL117W JIP4Q03361 876 aa6.11□□□□□ -1.43
RRI2YOL117W MPH3P0CE00 602 aa6.1□□□□□ -1.43
RRI2YOL117W YLR326WQ06170 240 aaKnown RBP6.1□□□□□ -1.43
RRI2YOL117W AI4P03878 556 aa6.09□□□□□ -1.43
RRI2YOL117W ILV3P39522 585 aaKnown RBP6.09□□□□□ -1.43
RRI2YOL117W YNL035CP53962 389 aaKnown RBP6.09□□□□□ -1.43
RRI2YOL117W YDR090CQ03193 310 aa6.09□□□□□ -1.43
RRI2YOL117W KEX1P09620 729 aa6.07□□□□□ -1.44
RRI2YOL117W PBS2P08018 668 aa6.07□□□□□ -1.44
RRI2YOL117W DSF2P38213 736 aa6.07□□□□□ -1.44
RRI2YOL117W VHR2P40041 505 aa6.07□□□□□ -1.44
RRI2YOL117W FKH1P40466 484 aa6.07□□□□□ -1.44
RRI2YOL117W RTG1P32607 177 aa6.06□□□□□ -1.44
RRI2YOL117W SEC61P32915 480 aa6.06□□□□□ -1.44
RRI2YOL117W COX6P00427 148 aa6.05□□□□□ -1.44
RRI2YOL117W MAK21Q12176 1025 aaKnown RBP6.04□□□□□ -1.44
RRI2YOL117W AIR2Q12476 344 aaKnown RBP6.04□□□□□ -1.44
RRI2YOL117W PCS60P38137 543 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
RRI2YOL117W LEU3P08638 886 aa6.01□□□□□ -1.45
RRI2YOL117W SPB4P25808 606 aaPredicted RBP6.01□□□□□ -1.45
RRI2YOL117W NCR1Q12200 1170 aa6.01□□□□□ -1.45
RRI2YOL117W SLI15P38283 698 aa6□□□□□ -1.45
RRI2YOL117W RAD54P32863 898 aa5.99□□□□□ -1.45
RRI2YOL117W PML39Q03760 334 aa5.98□□□□□ -1.45
RRI2YOL117W MID1P41821 548 aa5.97□□□□□ -1.45
RRI2YOL117W NUP42P49686 430 aaKnown RBP5.97□□□□□ -1.45
RRI2YOL117W MAM3Q12296 706 aa5.97□□□□□ -1.45
RRI2YOL117W YDL129WQ07555 291 aa5.96□□□□□ -1.46
RRI2YOL117W GAP1P19145 602 aaPredicted RBP5.93□□□□□ -1.46
RRI2YOL117W KIC1P38692 1080 aa5.93□□□□□ -1.46
RRI2YOL117W ORC6P38826 435 aa5.93□□□□□ -1.46
RRI2YOL117W IES2P40154 320 aa5.93□□□□□ -1.46
RRI2YOL117W TFG1P41895 735 aaPredicted RBP5.93□□□□□ -1.46
RRI2YOL117W DIT2P21595 489 aa5.92□□□□□ -1.46
RRI2YOL117W MPC54Q08550 464 aa5.92□□□□□ -1.46
RRI2YOL117W CDC73Q06697 393 aa5.91□□□□□ -1.46
RRI2YOL117W YDR344CQ05510 147 aa5.91□□□□□ -1.46
RRI2YOL117W SAP30P38429 201 aa5.9□□□□□ -1.46
RRI2YOL117W DPL1Q05567 589 aa5.89□□□□□ -1.47
RRI2YOL117W YNR021WP53723 404 aaKnown RBP5.88□□□□□ -1.47
RRI2YOL117W PEX29Q03370 554 aa5.88□□□□□ -1.47
RRI2YOL117W BMT6Q12291 365 aa5.88□□□□□ -1.47
RRI2YOL117W PSE1P32337 1089 aaKnown RBP5.87□□□□□ -1.47
RRI2YOL117W RGR1P19263 1082 aa5.87□□□□□ -1.47
RRI2YOL117W YJL171CP46992 396 aa5.87□□□□□ -1.47
RRI2YOL117W ARH1P48360 493 aa5.87□□□□□ -1.47
RRI2YOL117W MVP1P40959 511 aaKnown RBP5.86□□□□□ -1.47
RRI2YOL117W NMA111P53920 997 aa5.86□□□□□ -1.47
RRI2YOL117W CSC1Q06538 782 aa5.86□□□□□ -1.47
RRI2YOL117W LEO1P38439 464 aa5.85□□□□□ -1.47
RRI2YOL117W ISU2Q12056 156 aa5.85□□□□□ -1.47
RRI2YOL117W RPN1P38764 993 aaKnown RBP5.84□□□□□ -1.47
RRI2YOL117W RPP1BP10622 106 aaKnown RBP5.83□□□□□ -1.48
RRI2YOL117W TFB4Q12004 338 aa5.83□□□□□ -1.48
RRI2YOL117W HAP5Q02516 242 aa5.82□□□□□ -1.48
RRI2YOL117W PRE3P38624 215 aa5.82□□□□□ -1.48
RRI2YOL117W GLC3P32775 704 aa5.81□□□□□ -1.48
RRI2YOL117W AIM7Q12156 149 aa5.81□□□□□ -1.48
RRI2YOL117W CHL1P22516 861 aaPredicted RBP5.79□□□□□ -1.48
RRI2YOL117W BNI4P53858 892 aa5.79□□□□□ -1.48
RRI2YOL117W YPR109WQ06104 294 aa5.79□□□□□ -1.48
RRI2YOL117W RAM1P22007 431 aa5.78□□□□□ -1.48
RRI2YOL117W TUM1Q08686 304 aaKnown RBP5.78□□□□□ -1.48
RRI2YOL117W ELP4Q02884 456 aaKnown RBP5.78□□□□□ -1.48
RRI2YOL117W SPT23P35210 1082 aa5.77□□□□□ -1.49
RRI2YOL117W YRR1Q12172 810 aa5.77□□□□□ -1.49
RRI2YOL117W PEX21P50091 288 aa5.76□□□□□ -1.49
RRI2YOL117W PDR1P12383 1068 aa5.76□□□□□ -1.49
RRI2YOL117W ATF2P53296 535 aa5.76□□□□□ -1.49
RRI2YOL117W KIN1P13185 1064 aa5.75□□□□□ -1.49
RRI2YOL117W CLB5P30283 435 aa5.75□□□□□ -1.49
RRI2YOL117W TEA1P47988 759 aa5.75□□□□□ -1.49
RRI2YOL117W YML082WQ04533 649 aaKnown RBP5.75□□□□□ -1.49
RRI2YOL117W YPR015CQ12531 247 aa5.73□□□□□ -1.49
RRI2YOL117W SIT4P20604 311 aa5.72□□□□□ -1.49
RRI2YOL117W NIS1P53939 407 aa5.72□□□□□ -1.49
RRI2YOL117W PTC2P39966 464 aaKnown RBP5.71□□□□□ -1.5
RRI2YOL117W NUD1P32336 851 aa5.7□□□□□ -1.5
RRI2YOL117W STR2P47164 639 aa5.7□□□□□ -1.5
RRI2YOL117W ISM1P48526 1002 aa5.7□□□□□ -1.5
RRI2YOL117W FPK1P53739 893 aa5.68□□□□□ -1.5
RRI2YOL117W BUD20Q08004 166 aaPredicted RBP5.68□□□□□ -1.5
RRI2YOL117W SEC2P17065 759 aa5.66□□□□□ -1.5
RRI2YOL117W KTR1P27810 393 aaKnown RBP5.66□□□□□ -1.5
RRI2YOL117W HST2P53686 357 aa5.66□□□□□ -1.5
RRI2YOL117W TY1A-DR4O74302 440 aa5.66□□□□□ -1.5
RRI2YOL117W TY1A-HP0C2I4 478 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms