RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C REF2P42073 533 aaPredicted RBP5.36□□□□□ -1.55
RPB11YOL005C EAP1P36041 632 aaKnown RBP5.35□□□□□ -1.55
RPB11YOL005C TIF11P38912 153 aaKnown RBP5.35□□□□□ -1.55
RPB11YOL005C ULI1P43604 169 aa5.35□□□□□ -1.55
RPB11YOL005C TRP5P00931 707 aaKnown RBP5.34□□□□□ -1.55
RPB11YOL005C BUD31P25337 157 aaPredicted RBP5.33□□□□□ -1.56
RPB11YOL005C YEL023CP39992 682 aa5.33□□□□□ -1.56
RPB11YOL005C YGR273CP53329 174 aa5.33□□□□□ -1.56
RPB11YOL005C KIC1P38692 1080 aa5.31□□□□□ -1.56
RPB11YOL005C MAM3Q12296 706 aa5.31□□□□□ -1.56
RPB11YOL005C LEU3P08638 886 aa5.3□□□□□ -1.56
RPB11YOL005C SOL3P38858 249 aa5.3□□□□□ -1.56
RPB11YOL005C KEX1P09620 729 aa5.28□□□□□ -1.56
RPB11YOL005C DSF2P38213 736 aa5.28□□□□□ -1.56
RPB11YOL005C UBP14P38237 781 aaKnown RBP5.28□□□□□ -1.56
RPB11YOL005C YLR326WQ06170 240 aaKnown RBP5.28□□□□□ -1.56
RPB11YOL005C LDB19Q12502 818 aa5.28□□□□□ -1.56
RPB11YOL005C RAD54P32863 898 aa5.27□□□□□ -1.57
RPB11YOL005C IES2P40154 320 aa5.27□□□□□ -1.57
RPB11YOL005C COX6P00427 148 aa5.26□□□□□ -1.57
RPB11YOL005C PTC4P38089 393 aa5.26□□□□□ -1.57
RPB11YOL005C IOC2Q12072 812 aa5.26□□□□□ -1.57
RPB11YOL005C MAK21Q12176 1025 aaKnown RBP5.26□□□□□ -1.57
RPB11YOL005C RTG1P32607 177 aa5.25□□□□□ -1.57
RPB11YOL005C YDR090CQ03193 310 aa5.25□□□□□ -1.57
RPB11YOL005C JIP4Q03361 876 aa5.25□□□□□ -1.57
RPB11YOL005C AI4P03878 556 aa5.24□□□□□ -1.57
RPB11YOL005C MPH3P0CE00 602 aa5.24□□□□□ -1.57
RPB11YOL005C PCS60P38137 543 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57 RIP-Chip
RPB11YOL005C DAN4P47179 1161 aa5.24□□□□□ -1.57
RPB11YOL005C NST1P53935 1240 aa5.24□□□□□ -1.57
RPB11YOL005C YNL035CP53962 389 aaKnown RBP5.24□□□□□ -1.57
RPB11YOL005C LEO1P38439 464 aa5.23□□□□□ -1.57
RPB11YOL005C ILV3P39522 585 aaKnown RBP5.23□□□□□ -1.57
RPB11YOL005C SIS1P25294 352 aaKnown RBP5.22□□□□□ -1.57
RPB11YOL005C TFG1P41895 735 aaPredicted RBP5.22□□□□□ -1.57
RPB11YOL005C RPN1P38764 993 aaKnown RBP5.21□□□□□ -1.58
RPB11YOL005C PML39Q03760 334 aa5.21□□□□□ -1.58
RPB11YOL005C DIT2P21595 489 aa5.2□□□□□ -1.58
RPB11YOL005C SLI15P38283 698 aa5.2□□□□□ -1.58
RPB11YOL005C GLC3P32775 704 aa5.19□□□□□ -1.58
RPB11YOL005C MID1P41821 548 aa5.19□□□□□ -1.58
RPB11YOL005C PEX29Q03370 554 aa5.19□□□□□ -1.58
RPB11YOL005C NCR1Q12200 1170 aa5.19□□□□□ -1.58
RPB11YOL005C SEC61P32915 480 aa5.18□□□□□ -1.58
RPB11YOL005C NUP42P49686 430 aaKnown RBP5.18□□□□□ -1.58
RPB11YOL005C ATF2P53296 535 aa5.17□□□□□ -1.58
RPB11YOL005C YNR021WP53723 404 aaKnown RBP5.17□□□□□ -1.58
RPB11YOL005C RPP1BP10622 106 aaKnown RBP5.16□□□□□ -1.58
RPB11YOL005C CDC73Q06697 393 aa5.16□□□□□ -1.58
RPB11YOL005C SAP30P38429 201 aa5.15□□□□□ -1.59
RPB11YOL005C FKH1P40466 484 aa5.15□□□□□ -1.59
RPB11YOL005C PEX21P50091 288 aa5.14□□□□□ -1.59
RPB11YOL005C ORC6P38826 435 aa5.13□□□□□ -1.59
RPB11YOL005C YJL171CP46992 396 aa5.13□□□□□ -1.59
RPB11YOL005C YDL129WQ07555 291 aa5.13□□□□□ -1.59
RPB11YOL005C MPC54Q08550 464 aa5.12□□□□□ -1.59
RPB11YOL005C KIN1P13185 1064 aa5.11□□□□□ -1.59
RPB11YOL005C PSE1P32337 1089 aaKnown RBP5.11□□□□□ -1.59
RPB11YOL005C DPL1Q05567 589 aa5.11□□□□□ -1.59
RPB11YOL005C AIR2Q12476 344 aaKnown RBP5.11□□□□□ -1.59
RPB11YOL005C CSC1Q06538 782 aa5.09□□□□□ -1.59
RPB11YOL005C AIM7Q12156 149 aa5.09□□□□□ -1.59
RPB11YOL005C BMT6Q12291 365 aa5.09□□□□□ -1.59
RPB11YOL005C MVP1P40959 511 aaKnown RBP5.08□□□□□ -1.6
RPB11YOL005C TEA1P47988 759 aa5.08□□□□□ -1.6
RPB11YOL005C NMA111P53920 997 aa5.08□□□□□ -1.6
RPB11YOL005C TUM1Q08686 304 aaKnown RBP5.08□□□□□ -1.6
RPB11YOL005C RGR1P19263 1082 aa5.07□□□□□ -1.6
RPB11YOL005C ELP4Q02884 456 aaKnown RBP5.07□□□□□ -1.6
RPB11YOL005C YPR109WQ06104 294 aa5.07□□□□□ -1.6
RPB11YOL005C YRR1Q12172 810 aa5.07□□□□□ -1.6
RPB11YOL005C ISU2Q12056 156 aa5.06□□□□□ -1.6
RPB11YOL005C YDR344CQ05510 147 aa5.05□□□□□ -1.6
RPB11YOL005C TFB4Q12004 338 aa5.05□□□□□ -1.6
RPB11YOL005C GAP1P19145 602 aaPredicted RBP5.04□□□□□ -1.6
RPB11YOL005C HAP5Q02516 242 aa5.04□□□□□ -1.6
RPB11YOL005C CLB5P30283 435 aa5.03□□□□□ -1.6
RPB11YOL005C ARH1P48360 493 aa5.03□□□□□ -1.6
RPB11YOL005C YMR196WQ04336 1088 aa5.03□□□□□ -1.6
RPB11YOL005C DMA2P53924 522 aa5.02□□□□□ -1.61
RPB11YOL005C PDR1P12383 1068 aa5.01□□□□□ -1.61
RPB11YOL005C GUA1P38625 525 aaKnown RBP5.01□□□□□ -1.61
RPB11YOL005C NPL4P33755 580 aa5□□□□□ -1.61
RPB11YOL005C NIS1P53939 407 aa5□□□□□ -1.61
RPB11YOL005C PRE3P38624 215 aa4.99□□□□□ -1.61
RPB11YOL005C TYW1Q08960 810 aaKnown RBP4.99□□□□□ -1.61
RPB11YOL005C NUD1P32336 851 aa4.98□□□□□ -1.61
RPB11YOL005C SPT23P35210 1082 aa4.98□□□□□ -1.61
RPB11YOL005C PTC2P39966 464 aaKnown RBP4.98□□□□□ -1.61
RPB11YOL005C CSN12P47130 423 aa4.98□□□□□ -1.61
RPB11YOL005C FPK1P53739 893 aa4.98□□□□□ -1.61
RPB11YOL005C CHL1P22516 861 aaPredicted RBP4.96□□□□□ -1.62
RPB11YOL005C SCJ1P25303 377 aa4.96□□□□□ -1.62
RPB11YOL005C BNI4P53858 892 aa4.96□□□□□ -1.62
RPB11YOL005C SSA2P10592 639 aaKnown RBP4.95□□□□□ -1.62
RPB11YOL005C KEX2P13134 814 aa4.95□□□□□ -1.62
RPB11YOL005C GLN1P32288 370 aaKnown RBP4.95□□□□□ -1.62
RPB11YOL005C HGH1P48362 394 aaKnown RBP4.95□□□□□ -1.62
RPB11YOL005C MMP1Q12372 583 aa4.95□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms