RNA–Protein interactions for RNA: YNR018W

RCF2, Transcript of Cytochrome c oxidase subunit, yeastyeast

Gene RCF2, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCF2YNR018W SSM4P40318 1319 aa10.66□□□□□ -0.7
RCF2YNR018W PAN1P32521 1480 aa10.66□□□□□ -0.7
RCF2YNR018W ESC1Q03661 1658 aaKnown RBP10.66□□□□□ -0.7
RCF2YNR018W SNT2P53127 1403 aa10.65□□□□□ -0.7
RCF2YNR018W IFH1P39520 1085 aa10.64□□□□□ -0.71
RCF2YNR018W TY3B-GQ99315 1547 aa10.63□□□□□ -0.71
RCF2YNR018W RQC2Q12532 1038 aaKnown RBP10.62□□□□□ -0.71
RCF2YNR018W YBT1P32386 1661 aa10.61□□□□□ -0.71
RCF2YNR018W NTE1Q04958 1679 aa10.58□□□□□ -0.72
RCF2YNR018W RPA190P10964 1664 aaKnown RBP10.57□□□□□ -0.72
RCF2YNR018W BFR2Q06631 534 aaKnown RBP10.57□□□□□ -0.72
RCF2YNR018W RPO21P04050 1733 aaKnown RBP10.57□□□□□ -0.72
RCF2YNR018W IRC20Q06554 1556 aa10.55□□□□□ -0.72
RCF2YNR018W GEA2P39993 1459 aaKnown RBP10.52□□□□□ -0.73
RCF2YNR018W VPS15P22219 1454 aa10.5□□□□□ -0.73
RCF2YNR018W DNF1P32660 1571 aa10.5□□□□□ -0.73
RCF2YNR018W CAT8P39113 1433 aa10.48□□□□□ -0.73
RCF2YNR018W RTT106P40161 455 aa10.43□□□□□ -0.74
RCF2YNR018W ARO1P08566 1588 aaKnown RBP10.39□□□□□ -0.75
RCF2YNR018W PDR10P51533 1564 aa10.39□□□□□ -0.75
RCF2YNR018W NUP159P40477 1460 aa10.38□□□□□ -0.75
RCF2YNR018W GDB1Q06625 1536 aa10.38□□□□□ -0.75
RCF2YNR018W YRF1-1P0CX20 1796 aa10.37□□□□□ -0.75
RCF2YNR018W YRF1-5P0CX21 1796 aa10.37□□□□□ -0.75
RCF2YNR018W YRF1-8P0CX22 1796 aa10.37□□□□□ -0.75
RCF2YNR018W SRB8P25648 1427 aa10.36□□□□□ -0.75
RCF2YNR018W GCN2P15442 1659 aa10.36□□□□□ -0.75
RCF2YNR018W SPO14P36126 1683 aa10.36□□□□□ -0.75
RCF2YNR018W PDR12Q02785 1511 aa10.36□□□□□ -0.75
RCF2YNR018W POL5P39985 1022 aaKnown RBP10.28□□□□□ -0.76
RCF2YNR018W NSR1P27476 414 aaKnown RBP RIP-Chip data10.27□□□□□ -0.77not detected
RCF2YNR018W MET10P39692 1035 aa10.26□□□□□ -0.77
RCF2YNR018W BUD3P25558 1636 aa10.25□□□□□ -0.77
RCF2YNR018W NUP157P40064 1391 aaKnown RBP10.25□□□□□ -0.77
RCF2YNR018W CKB1P43639 278 aa10.23□□□□□ -0.77
RCF2YNR018W MET5P47169 1442 aa10.22□□□□□ -0.77
RCF2YNR018W MMS1Q06211 1407 aa10.21□□□□□ -0.78
RCF2YNR018W IQG1Q12280 1495 aa10.21□□□□□ -0.78
RCF2YNR018W YSP2Q06681 1438 aa10.2□□□□□ -0.78
RCF2YNR018W PDR5P33302 1511 aaKnown RBP10.19□□□□□ -0.78
RCF2YNR018W SEC7P11075 2009 aaKnown RBP10.19□□□□□ -0.78
RCF2YNR018W BUD21Q08492 214 aaPredicted RBP10.17□□□□□ -0.78
RCF2YNR018W YOR093CQ12275 1648 aa10.15□□□□□ -0.78
RCF2YNR018W ENP1P38333 483 aaKnown RBP10.12□□□□□ -0.79
RCF2YNR018W CHC1P22137 1653 aaKnown RBP10.12□□□□□ -0.79
RCF2YNR018W SEC3P33332 1336 aaKnown RBP10.11□□□□□ -0.79
RCF2YNR018W NOP7P53261 605 aaKnown RBP10.11□□□□□ -0.79
RCF2YNR018W NOP2P40991 618 aaKnown RBP10.08□□□□□ -0.8
RCF2YNR018W SPT7P35177 1332 aa10.07□□□□□ -0.8
RCF2YNR018W BNR1P40450 1375 aa10.05□□□□□ -0.8
RCF2YNR018W LTE1P07866 1435 aa10.03□□□□□ -0.8
RCF2YNR018W PAF1P38351 445 aa10.03□□□□□ -0.8
RCF2YNR018W DOP1Q03921 1698 aa10.02□□□□□ -0.81
RCF2YNR018W TY3B-IQ7LHG5 1498 aaKnown RBP9.99□□□□□ -0.81
RCF2YNR018W VMR1P38735 1592 aa9.99□□□□□ -0.81
RCF2YNR018W MHP1P43638 1398 aa9.99□□□□□ -0.81
RCF2YNR018W NUP188P52593 1655 aaKnown RBP9.97□□□□□ -0.81
RCF2YNR018W RAV1P47104 1357 aa9.97□□□□□ -0.81
RCF2YNR018W PDR11P40550 1411 aa9.95□□□□□ -0.82
RCF2YNR018W TRM3Q07527 1436 aa9.94□□□□□ -0.82
RCF2YNR018W RTC1Q08281 1341 aa9.93□□□□□ -0.82
RCF2YNR018W IML1P47170 1584 aa9.92□□□□□ -0.82
RCF2YNR018W YLR419WQ06698 1435 aaKnown RBP9.9□□□□□ -0.83
RCF2YNR018W NUP192P47054 1683 aa9.9□□□□□ -0.83
RCF2YNR018W ORC1P54784 914 aaPredicted RBP9.89□□□□□ -0.83
RCF2YNR018W PSD2P53037 1138 aaKnown RBP9.87□□□□□ -0.83
RCF2YNR018W DRS2P39524 1355 aa9.87□□□□□ -0.83
RCF2YNR018W PRS1P32895 427 aaKnown RBP9.86□□□□□ -0.83
RCF2YNR018W DNF2Q12675 1612 aa9.85□□□□□ -0.83
RCF2YNR018W LEU3P08638 886 aa9.83□□□□□ -0.84
RCF2YNR018W TAF5P38129 798 aa9.83□□□□□ -0.84
RCF2YNR018W ESL2P36168 1195 aa9.82□□□□□ -0.84
RCF2YNR018W MLP1Q02455 1875 aaKnown RBP9.82□□□□□ -0.84
RCF2YNR018W PDS5Q04264 1277 aa9.81□□□□□ -0.84
RCF2YNR018W KIP3P53086 805 aaKnown RBP9.78□□□□□ -0.84
RCF2YNR018W BNI1P41832 1953 aa9.77□□□□□ -0.84
RCF2YNR018W SCT1P32784 759 aa9.73□□□□□ -0.85
RCF2YNR018W CAB3P36076 571 aa9.71□□□□□ -0.86
RCF2YNR018W NST1P53935 1240 aa9.71□□□□□ -0.86
RCF2YNR018W SPE2P21182 396 aa9.7□□□□□ -0.86
RCF2YNR018W EBP2P36049 427 aaKnown RBP9.7□□□□□ -0.86
RCF2YNR018W TYS1P36421 394 aaKnown RBP9.7□□□□□ -0.86
RCF2YNR018W IPL1P38991 367 aa9.69□□□□□ -0.86
RCF2YNR018W BCK1Q01389 1478 aa9.69□□□□□ -0.86
RCF2YNR018W URN1Q06525 465 aaKnown RBP9.68□□□□□ -0.86
RCF2YNR018W ITT1Q04638 464 aa9.66□□□□□ -0.86
RCF2YNR018W YAP3P38749 330 aa9.65□□□□□ -0.86
RCF2YNR018W HAP1P0CE41 1502 aa9.65□□□□□ -0.86
RCF2YNR018W ALD4P46367 519 aaKnown RBP9.64□□□□□ -0.87
RCF2YNR018W RAD9P14737 1309 aa9.63□□□□□ -0.87
RCF2YNR018W TAF8Q03750 510 aa9.62□□□□□ -0.87
RCF2YNR018W RTG3P38165 486 aa9.61□□□□□ -0.87
RCF2YNR018W RPP0P05317 312 aaKnown RBP9.59□□□□□ -0.87
RCF2YNR018W FKH1P40466 484 aa9.59□□□□□ -0.87
RCF2YNR018W SNF2P22082 1703 aa9.59□□□□□ -0.87
RCF2YNR018W CHZ1P40019 153 aaPredicted RBP9.58□□□□□ -0.88
RCF2YNR018W IOC4Q04213 475 aa9.58□□□□□ -0.88
RCF2YNR018W CFT1Q06632 1357 aaKnown RBP9.56□□□□□ -0.88
RCF2YNR018W TFA1P36100 482 aa9.56□□□□□ -0.88
RCF2YNR018W FAP1P53971 965 aa9.56□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms