RNA–Protein interactions for RNA: YMR198W

CIK1, Transcript of Kinesin-associated protein, yeastyeast

Gene CIK1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIK1YMR198W GUT1P32190 709 aa8.74□□□□□ -1.01
CIK1YMR198W ATH1P48016 1211 aa8.74□□□□□ -1.01
CIK1YMR198W SEC61P32915 480 aa8.73□□□□□ -1.01
CIK1YMR198W NST1P53935 1240 aa8.73□□□□□ -1.01
CIK1YMR198W JIP4Q03361 876 aa8.72□□□□□ -1.01
CIK1YMR198W NCR1Q12200 1170 aa8.71□□□□□ -1.01
CIK1YMR198W SOL3P38858 249 aa8.71□□□□□ -1.02
CIK1YMR198W NOP53Q12080 455 aaKnown RBP8.71□□□□□ -1.02
CIK1YMR198W PTC4P38089 393 aa8.7□□□□□ -1.02
CIK1YMR198W YJL171CP46992 396 aa8.69□□□□□ -1.02
CIK1YMR198W SET1P38827 1080 aaKnown RBP8.68□□□□□ -1.02
CIK1YMR198W BMT6Q12291 365 aa8.67□□□□□ -1.02
CIK1YMR198W ILV3P39522 585 aaKnown RBP8.61□□□□□ -1.03
CIK1YMR198W YGR273CP53329 174 aa8.6□□□□□ -1.03
CIK1YMR198W YDL129WQ07555 291 aa8.59□□□□□ -1.03
CIK1YMR198W SAP30P38429 201 aa8.58□□□□□ -1.04
CIK1YMR198W MPH3P0CE00 602 aa8.57□□□□□ -1.04
CIK1YMR198W TFG1P41895 735 aaPredicted RBP8.57□□□□□ -1.04
CIK1YMR198W AI4P03878 556 aa8.56□□□□□ -1.04
CIK1YMR198W PML39Q03760 334 aa8.56□□□□□ -1.04
CIK1YMR198W YDR344CQ05510 147 aa8.53□□□□□ -1.04
CIK1YMR198W MID1P41821 548 aa8.51□□□□□ -1.05
CIK1YMR198W YPR148CQ06523 435 aa8.5□□□□□ -1.05
CIK1YMR198W DMA1P38823 416 aa8.49□□□□□ -1.05
CIK1YMR198W KEX1P09620 729 aa8.45□□□□□ -1.06
CIK1YMR198W UBP14P38237 781 aaKnown RBP8.45□□□□□ -1.06
CIK1YMR198W IFH1P39520 1085 aa8.45□□□□□ -1.06
CIK1YMR198W YLR326WQ06170 240 aaKnown RBP8.45□□□□□ -1.06
CIK1YMR198W SLI15P38283 698 aa8.43□□□□□ -1.06
CIK1YMR198W VHR2P40041 505 aa8.43□□□□□ -1.06
CIK1YMR198W PRE3P38624 215 aa8.42□□□□□ -1.06
CIK1YMR198W CHL1P22516 861 aaPredicted RBP8.4□□□□□ -1.07
CIK1YMR198W PEX29Q03370 554 aa8.38□□□□□ -1.07
CIK1YMR198W VPS70P47161 811 aa8.38□□□□□ -1.07
CIK1YMR198W ARH1P48360 493 aa8.38□□□□□ -1.07
CIK1YMR198W YDR090CQ03193 310 aa8.38□□□□□ -1.07
CIK1YMR198W MPC54Q08550 464 aa8.38□□□□□ -1.07
CIK1YMR198W PCS60P38137 543 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07 RIP-Chip
CIK1YMR198W ELP4Q02884 456 aaKnown RBP8.33□□□□□ -1.08
CIK1YMR198W REF2P42073 533 aaPredicted RBP8.32□□□□□ -1.08
CIK1YMR198W RAD54P32863 898 aa8.31□□□□□ -1.08
CIK1YMR198W SAS10Q12136 610 aaPredicted RBP8.31□□□□□ -1.08
CIK1YMR198W HAP5Q02516 242 aa8.3□□□□□ -1.08
CIK1YMR198W DPL1Q05567 589 aa8.3□□□□□ -1.08
CIK1YMR198W CDC73Q06697 393 aa8.3□□□□□ -1.08
CIK1YMR198W NMA111P53920 997 aa8.28□□□□□ -1.08
CIK1YMR198W BCK2P33306 851 aa8.26□□□□□ -1.09
CIK1YMR198W SPT23P35210 1082 aa8.24□□□□□ -1.09
CIK1YMR198W BNI4P53858 892 aa8.24□□□□□ -1.09
CIK1YMR198W COX6P00427 148 aa8.2□□□□□ -1.1
CIK1YMR198W VRP1P37370 817 aa8.2□□□□□ -1.1
CIK1YMR198W KIC1P38692 1080 aa8.2□□□□□ -1.1
CIK1YMR198W ISU2Q12056 156 aa8.2□□□□□ -1.1
CIK1YMR198W GAP1P19145 602 aaPredicted RBP8.19□□□□□ -1.1
CIK1YMR198W CKB1P43639 278 aa8.19□□□□□ -1.1
CIK1YMR198W MAK21Q12176 1025 aaKnown RBP8.19□□□□□ -1.1
CIK1YMR198W ORC6P38826 435 aa8.18□□□□□ -1.1
CIK1YMR198W RAM1P22007 431 aa8.17□□□□□ -1.1
CIK1YMR198W YML082WQ04533 649 aaKnown RBP8.17□□□□□ -1.1
CIK1YMR198W YPR015CQ12531 247 aa8.17□□□□□ -1.1
CIK1YMR198W PBS2P08018 668 aa8.16□□□□□ -1.1
CIK1YMR198W PTC2P39966 464 aaKnown RBP8.16□□□□□ -1.1
CIK1YMR198W PDR1P12383 1068 aa8.14□□□□□ -1.11
CIK1YMR198W XDJ1P39102 459 aa8.11□□□□□ -1.11
CIK1YMR198W RPP1BP10622 106 aaKnown RBP8.1□□□□□ -1.11
CIK1YMR198W DSF2P38213 736 aa8.09□□□□□ -1.11
CIK1YMR198W CSC1Q06538 782 aa8.09□□□□□ -1.11
CIK1YMR198W TFB4Q12004 338 aa8.07□□□□□ -1.12
CIK1YMR198W YRR1Q12172 810 aa8.07□□□□□ -1.12
CIK1YMR198W MVP1P40959 511 aaKnown RBP8.06□□□□□ -1.12
CIK1YMR198W TUM1Q08686 304 aaKnown RBP8.05□□□□□ -1.12
CIK1YMR198W MAM3Q12296 706 aa8.05□□□□□ -1.12
CIK1YMR198W RGR1P19263 1082 aa8.04□□□□□ -1.12
CIK1YMR198W RQC2Q12532 1038 aaKnown RBP8.04□□□□□ -1.12
CIK1YMR198W PEX21P50091 288 aa8.03□□□□□ -1.12
CIK1YMR198W IES2P40154 320 aa8.02□□□□□ -1.13
CIK1YMR198W STR2P47164 639 aa8.01□□□□□ -1.13
CIK1YMR198W NUP42P49686 430 aaKnown RBP8.01□□□□□ -1.13
CIK1YMR198W SPB4P25808 606 aaPredicted RBP7.99□□□□□ -1.13
CIK1YMR198W NUD1P32336 851 aa7.98□□□□□ -1.13
CIK1YMR198W PSE1P32337 1089 aaKnown RBP7.97□□□□□ -1.13
CIK1YMR198W ISM1P48526 1002 aa7.97□□□□□ -1.13
CIK1YMR198W BUD20Q08004 166 aaPredicted RBP7.97□□□□□ -1.13
CIK1YMR198W YPR109WQ06104 294 aa7.97□□□□□ -1.13
CIK1YMR198W DIT2P21595 489 aa7.94□□□□□ -1.14
CIK1YMR198W SDH2P21801 266 aa7.94□□□□□ -1.14
CIK1YMR198W DPS1P04802 557 aaKnown RBP7.93□□□□□ -1.14
CIK1YMR198W TY1A-DR4O74302 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-HP0C2I4 478 aaKnown RBP7.92□□□□□ -1.14
CIK1YMR198W TY1A-AP0CX57 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-PR1P0CX58 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-ORP0CX59 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-PR2P0CX60 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-DR5P0CX65 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-ER2P0CX66 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-GR3P0CX67 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-LR1P0CX68 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-MR2P0CX69 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-JR2P47099 440 aa7.92□□□□□ -1.14
CIK1YMR198W TY1A-DR1Q03856 440 aa7.92□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms