RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C ULI1P43604 169 aa10.85□□□□□ -0.67
PEX12YMR026C TRP5P00931 707 aaKnown RBP10.83□□□□□ -0.68
PEX12YMR026C SOL3P38858 249 aa10.83□□□□□ -0.68
PEX12YMR026C REF2P42073 533 aaPredicted RBP10.82□□□□□ -0.68
PEX12YMR026C YGR273CP53329 174 aa10.81□□□□□ -0.68
PEX12YMR026C IOC2Q12072 812 aa10.79□□□□□ -0.68
PEX12YMR026C SPB4P25808 606 aaPredicted RBP10.78□□□□□ -0.68
PEX12YMR026C NST1P53935 1240 aa10.78□□□□□ -0.68
PEX12YMR026C PBS2P08018 668 aa10.76□□□□□ -0.69
PEX12YMR026C YEL023CP39992 682 aa10.75□□□□□ -0.69
PEX12YMR026C UBP14P38237 781 aaKnown RBP10.74□□□□□ -0.69
PEX12YMR026C VHR2P40041 505 aa10.74□□□□□ -0.69
PEX12YMR026C PTC4P38089 393 aa10.72□□□□□ -0.69
PEX12YMR026C JIP4Q03361 876 aa10.72□□□□□ -0.69
PEX12YMR026C YLR326WQ06170 240 aaKnown RBP10.71□□□□□ -0.69
PEX12YMR026C MPH3P0CE00 602 aa10.7□□□□□ -0.7
PEX12YMR026C DSF2P38213 736 aa10.7□□□□□ -0.7
PEX12YMR026C LDB19Q12502 818 aa10.7□□□□□ -0.7
PEX12YMR026C LEU3P08638 886 aa10.69□□□□□ -0.7
PEX12YMR026C AI4P03878 556 aa10.68□□□□□ -0.7
PEX12YMR026C KEX1P09620 729 aa10.68□□□□□ -0.7
PEX12YMR026C MAK21Q12176 1025 aaKnown RBP10.68□□□□□ -0.7
PEX12YMR026C COX6P00427 148 aa10.67□□□□□ -0.7
PEX12YMR026C YNL035CP53962 389 aaKnown RBP10.67□□□□□ -0.7
PEX12YMR026C YDR090CQ03193 310 aa10.67□□□□□ -0.7
PEX12YMR026C DAN4P47179 1161 aa10.66□□□□□ -0.7
PEX12YMR026C RTG1P32607 177 aa10.64□□□□□ -0.71
PEX12YMR026C ILV3P39522 585 aaKnown RBP10.64□□□□□ -0.71
PEX12YMR026C SIS1P25294 352 aaKnown RBP10.62□□□□□ -0.71
PEX12YMR026C RAD54P32863 898 aa10.61□□□□□ -0.71
PEX12YMR026C PCS60P38137 543 aaKnown RBP RIP-Chip data10.61□□□□□ -0.71 RIP-Chip
PEX12YMR026C MAM3Q12296 706 aa10.61□□□□□ -0.71
PEX12YMR026C SEC61P32915 480 aa10.6□□□□□ -0.71
PEX12YMR026C KIC1P38692 1080 aa10.59□□□□□ -0.71
PEX12YMR026C NCR1Q12200 1170 aa10.56□□□□□ -0.72
PEX12YMR026C FKH1P40466 484 aa10.55□□□□□ -0.72
PEX12YMR026C IES2P40154 320 aa10.54□□□□□ -0.72
PEX12YMR026C SLI15P38283 698 aa10.53□□□□□ -0.72
PEX12YMR026C TFG1P41895 735 aaPredicted RBP10.51□□□□□ -0.73
PEX12YMR026C PML39Q03760 334 aa10.51□□□□□ -0.73
PEX12YMR026C NUP42P49686 430 aaKnown RBP10.5□□□□□ -0.73
PEX12YMR026C AIR2Q12476 344 aaKnown RBP10.5□□□□□ -0.73
PEX12YMR026C LEO1P38439 464 aa10.47□□□□□ -0.73
PEX12YMR026C MID1P41821 548 aa10.47□□□□□ -0.73
PEX12YMR026C DIT2P21595 489 aa10.46□□□□□ -0.73
PEX12YMR026C YDL129WQ07555 291 aa10.46□□□□□ -0.73
PEX12YMR026C RPN1P38764 993 aaKnown RBP10.45□□□□□ -0.74
PEX12YMR026C YNR021WP53723 404 aaKnown RBP10.44□□□□□ -0.74
PEX12YMR026C ORC6P38826 435 aa10.42□□□□□ -0.74
PEX12YMR026C CDC73Q06697 393 aa10.4□□□□□ -0.74
PEX12YMR026C RPP1BP10622 106 aaKnown RBP10.39□□□□□ -0.75
PEX12YMR026C MPC54Q08550 464 aa10.38□□□□□ -0.75
PEX12YMR026C PSE1P32337 1089 aaKnown RBP10.37□□□□□ -0.75
PEX12YMR026C SAP30P38429 201 aa10.37□□□□□ -0.75
PEX12YMR026C PEX29Q03370 554 aa10.37□□□□□ -0.75
PEX12YMR026C DPL1Q05567 589 aa10.37□□□□□ -0.75
PEX12YMR026C GAP1P19145 602 aaPredicted RBP10.35□□□□□ -0.75
PEX12YMR026C YJL171CP46992 396 aa10.35□□□□□ -0.75
PEX12YMR026C GLC3P32775 704 aa10.34□□□□□ -0.75
PEX12YMR026C CSC1Q06538 782 aa10.33□□□□□ -0.76
PEX12YMR026C BMT6Q12291 365 aa10.32□□□□□ -0.76
PEX12YMR026C RGR1P19263 1082 aa10.31□□□□□ -0.76
PEX12YMR026C MVP1P40959 511 aaKnown RBP10.31□□□□□ -0.76
PEX12YMR026C NMA111P53920 997 aa10.3□□□□□ -0.76
PEX12YMR026C ATF2P53296 535 aa10.29□□□□□ -0.76
PEX12YMR026C AIM7Q12156 149 aa10.29□□□□□ -0.76
PEX12YMR026C TFB4Q12004 338 aa10.28□□□□□ -0.76
PEX12YMR026C ISU2Q12056 156 aa10.28□□□□□ -0.76
PEX12YMR026C ARH1P48360 493 aa10.26□□□□□ -0.77
PEX12YMR026C PEX21P50091 288 aa10.26□□□□□ -0.77
PEX12YMR026C YDR344CQ05510 147 aa10.26□□□□□ -0.77
PEX12YMR026C KIN1P13185 1064 aa10.23□□□□□ -0.77
PEX12YMR026C HAP5Q02516 242 aa10.23□□□□□ -0.77
PEX12YMR026C YPR109WQ06104 294 aa10.23□□□□□ -0.77
PEX12YMR026C ELP4Q02884 456 aaKnown RBP10.22□□□□□ -0.77
PEX12YMR026C TUM1Q08686 304 aaKnown RBP10.21□□□□□ -0.77
PEX12YMR026C TEA1P47988 759 aa10.2□□□□□ -0.78
PEX12YMR026C CLB5P30283 435 aa10.19□□□□□ -0.78
PEX12YMR026C YRR1Q12172 810 aa10.19□□□□□ -0.78
PEX12YMR026C PRE3P38624 215 aa10.17□□□□□ -0.78
PEX12YMR026C CHL1P22516 861 aaPredicted RBP10.14□□□□□ -0.79
PEX12YMR026C SPT23P35210 1082 aa10.14□□□□□ -0.79
PEX12YMR026C BNI4P53858 892 aa10.14□□□□□ -0.79
PEX12YMR026C PDR1P12383 1068 aa10.11□□□□□ -0.79
PEX12YMR026C NIS1P53939 407 aa10.08□□□□□ -0.8
PEX12YMR026C PTC2P39966 464 aaKnown RBP10.07□□□□□ -0.8
PEX12YMR026C RAM1P22007 431 aa10.05□□□□□ -0.8
PEX12YMR026C NUD1P32336 851 aa10.05□□□□□ -0.8
PEX12YMR026C SIT4P20604 311 aa10.03□□□□□ -0.8
PEX12YMR026C GUA1P38625 525 aaKnown RBP10.03□□□□□ -0.8
PEX12YMR026C FPK1P53739 893 aa10.03□□□□□ -0.8
PEX12YMR026C YML082WQ04533 649 aaKnown RBP10.03□□□□□ -0.8
PEX12YMR026C CSN12P47130 423 aa10.01□□□□□ -0.81
PEX12YMR026C YMR196WQ04336 1088 aa10.01□□□□□ -0.81
PEX12YMR026C NPL4P33755 580 aa10□□□□□ -0.81
PEX12YMR026C STR2P47164 639 aa9.99□□□□□ -0.81
PEX12YMR026C ISM1P48526 1002 aa9.99□□□□□ -0.81
PEX12YMR026C YPR015CQ12531 247 aa9.99□□□□□ -0.81
PEX12YMR026C HST2P53686 357 aa9.98□□□□□ -0.81
PEX12YMR026C TYW1Q08960 810 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms