RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C LDB19Q12502 818 aa7.91□□□□□ -1.14
VPS71YML041C PBS2P08018 668 aa7.9□□□□□ -1.14
VPS71YML041C FKH1P40466 484 aa7.9□□□□□ -1.14
VPS71YML041C AIR2Q12476 344 aaKnown RBP7.89□□□□□ -1.15
VPS71YML041C TRP5P00931 707 aaKnown RBP7.88□□□□□ -1.15
VPS71YML041C MIF2P35201 549 aa7.88□□□□□ -1.15
VPS71YML041C GYP5Q12344 894 aa7.86□□□□□ -1.15
VPS71YML041C YNR021WP53723 404 aaKnown RBP7.85□□□□□ -1.15
VPS71YML041C REF2P42073 533 aaPredicted RBP7.84□□□□□ -1.15
VPS71YML041C ABP1P15891 592 aaKnown RBP7.82□□□□□ -1.16
VPS71YML041C PTC3P34221 468 aaKnown RBP7.82□□□□□ -1.16
VPS71YML041C NUP42P49686 430 aaKnown RBP7.81□□□□□ -1.16
VPS71YML041C RTG1P32607 177 aa7.8□□□□□ -1.16
VPS71YML041C DCW1P36091 449 aa7.8□□□□□ -1.16
VPS71YML041C GRE2Q12068 342 aaKnown RBP7.79□□□□□ -1.16
VPS71YML041C KIN1P13185 1064 aa7.78□□□□□ -1.16
VPS71YML041C YNL035CP53962 389 aaKnown RBP7.78□□□□□ -1.16
VPS71YML041C HTA1P04911 132 aaKnown RBP7.77□□□□□ -1.17
VPS71YML041C HTA2P04912 132 aa7.77□□□□□ -1.17
VPS71YML041C YJL171CP46992 396 aa7.77□□□□□ -1.17
VPS71YML041C AIM7Q12156 149 aa7.77□□□□□ -1.17
VPS71YML041C MAM3Q12296 706 aa7.77□□□□□ -1.17
VPS71YML041C COX6P00427 148 aa7.76□□□□□ -1.17
VPS71YML041C DIT2P21595 489 aa7.76□□□□□ -1.17
VPS71YML041C ATH1P48016 1211 aa7.75□□□□□ -1.17
VPS71YML041C MAK21Q12176 1025 aaKnown RBP7.75□□□□□ -1.17
VPS71YML041C NCR1Q12200 1170 aa7.75□□□□□ -1.17
VPS71YML041C SEC61P32915 480 aa7.74□□□□□ -1.17
VPS71YML041C IES2P40154 320 aa7.74□□□□□ -1.17
VPS71YML041C DAN4P47179 1161 aa7.74□□□□□ -1.17
VPS71YML041C GUT1P32190 709 aa7.73□□□□□ -1.17
VPS71YML041C JIP4Q03361 876 aa7.73□□□□□ -1.17
VPS71YML041C GLC3P32775 704 aa7.71□□□□□ -1.18
VPS71YML041C UBP14P38237 781 aaKnown RBP7.71□□□□□ -1.18
VPS71YML041C YEL023CP39992 682 aa7.71□□□□□ -1.18
VPS71YML041C YDR090CQ03193 310 aa7.71□□□□□ -1.18
VPS71YML041C BMT6Q12291 365 aa7.7□□□□□ -1.18
VPS71YML041C PTC4P38089 393 aa7.69□□□□□ -1.18
VPS71YML041C RLF2Q12495 606 aa7.69□□□□□ -1.18
VPS71YML041C SOL3P38858 249 aa7.67□□□□□ -1.18
VPS71YML041C NST1P53935 1240 aa7.66□□□□□ -1.18
VPS71YML041C YLR326WQ06170 240 aaKnown RBP7.64□□□□□ -1.19
VPS71YML041C GUA1P38625 525 aaKnown RBP7.63□□□□□ -1.19
VPS71YML041C TFG1P41895 735 aaPredicted RBP7.63□□□□□ -1.19
VPS71YML041C VHR2P40041 505 aa7.61□□□□□ -1.19
VPS71YML041C YGR273CP53329 174 aa7.6□□□□□ -1.19
VPS71YML041C YDL129WQ07555 291 aa7.6□□□□□ -1.19
VPS71YML041C SAP30P38429 201 aa7.59□□□□□ -1.19
VPS71YML041C HPC2Q01448 625 aa7.58□□□□□ -1.2
VPS71YML041C ATF2P53296 535 aa7.57□□□□□ -1.2
VPS71YML041C AI4P03878 556 aa7.56□□□□□ -1.2
VPS71YML041C MPH3P0CE00 602 aa7.56□□□□□ -1.2
VPS71YML041C ILV3P39522 585 aaKnown RBP7.56□□□□□ -1.2
VPS71YML041C PML39Q03760 334 aa7.56□□□□□ -1.2
VPS71YML041C PCS60P38137 543 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
VPS71YML041C KEX1P09620 729 aa7.54□□□□□ -1.2
VPS71YML041C PSE1P32337 1089 aaKnown RBP7.54□□□□□ -1.2
VPS71YML041C MID1P41821 548 aa7.51□□□□□ -1.21
VPS71YML041C HGH1P48362 394 aaKnown RBP7.51□□□□□ -1.21
VPS71YML041C RAD54P32863 898 aa7.5□□□□□ -1.21
VPS71YML041C ORC6P38826 435 aa7.49□□□□□ -1.21
VPS71YML041C YDR344CQ05510 147 aa7.49□□□□□ -1.21
VPS71YML041C TFB3Q03290 321 aa7.48□□□□□ -1.21
VPS71YML041C CHL1P22516 861 aaPredicted RBP7.46□□□□□ -1.22
VPS71YML041C PRE3P38624 215 aa7.46□□□□□ -1.22
VPS71YML041C KIC1P38692 1080 aa7.46□□□□□ -1.22
VPS71YML041C GAP1P19145 602 aaPredicted RBP7.44□□□□□ -1.22
VPS71YML041C RGR1P19263 1082 aa7.43□□□□□ -1.22
VPS71YML041C SLI15P38283 698 aa7.43□□□□□ -1.22
VPS71YML041C CSN12P47130 423 aa7.43□□□□□ -1.22
VPS71YML041C PKC1P24583 1151 aa7.42□□□□□ -1.22
VPS71YML041C KTR1P27810 393 aaKnown RBP7.42□□□□□ -1.22
VPS71YML041C SSA2P10592 639 aaKnown RBP7.4□□□□□ -1.22
VPS71YML041C ARH1P48360 493 aa7.4□□□□□ -1.22
VPS71YML041C ELP4Q02884 456 aaKnown RBP7.4□□□□□ -1.22
VPS71YML041C PEX29Q03370 554 aa7.4□□□□□ -1.22
VPS71YML041C MVP1P40959 511 aaKnown RBP7.39□□□□□ -1.23
VPS71YML041C MPC54Q08550 464 aa7.39□□□□□ -1.23
VPS71YML041C GLN1P32288 370 aaKnown RBP7.38□□□□□ -1.23
VPS71YML041C TEA1P47988 759 aa7.38□□□□□ -1.23
VPS71YML041C BRL1P38770 471 aa7.37□□□□□ -1.23
VPS71YML041C CLB5P30283 435 aa7.34□□□□□ -1.23
VPS71YML041C CDC73Q06697 393 aa7.34□□□□□ -1.23
VPS71YML041C BCK2P33306 851 aa7.33□□□□□ -1.24
VPS71YML041C BIM1P40013 344 aa7.33□□□□□ -1.24
VPS71YML041C HAP5Q02516 242 aa7.33□□□□□ -1.24
VPS71YML041C DPL1Q05567 589 aa7.33□□□□□ -1.24
VPS71YML041C CSC1Q06538 782 aa7.33□□□□□ -1.24
VPS71YML041C HST2P53686 357 aa7.32□□□□□ -1.24
VPS71YML041C NMA111P53920 997 aa7.32□□□□□ -1.24
VPS71YML041C TYW1Q08960 810 aaKnown RBP7.32□□□□□ -1.24
VPS71YML041C SPT23P35210 1082 aa7.31□□□□□ -1.24
VPS71YML041C NIS1P53939 407 aa7.31□□□□□ -1.24
VPS71YML041C SIT4P20604 311 aa7.3□□□□□ -1.24
VPS71YML041C ATG32P40458 529 aa7.3□□□□□ -1.24
VPS71YML041C FPK1P53739 893 aa7.3□□□□□ -1.24
VPS71YML041C YPR109WQ06104 294 aa7.3□□□□□ -1.24
VPS71YML041C YJL007CP47080 104 aa7.29□□□□□ -1.24
VPS71YML041C VRP1P37370 817 aa7.28□□□□□ -1.24
VPS71YML041C BNI4P53858 892 aa7.28□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms