RNA–Protein interactions for RNA: YLR438W

CAR2, Transcript of L-ornithine transaminase (OTAse), yeastyeast

Gene CAR2, Length 1,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAR2YLR438W TY1B-GR1Q12141 1755 aa10.67□□□□□ -0.7
CAR2YLR438W TY1B-BLQ12490 1755 aa10.67□□□□□ -0.7
CAR2YLR438W SNT2P53127 1403 aa10.64□□□□□ -0.71
CAR2YLR438W NUP170P38181 1502 aa10.63□□□□□ -0.71
CAR2YLR438W NTE1Q04958 1679 aa10.63□□□□□ -0.71
CAR2YLR438W MTC1P47018 478 aaKnown RBP10.62□□□□□ -0.71
CAR2YLR438W RPA190P10964 1664 aaKnown RBP10.61□□□□□ -0.71
CAR2YLR438W DNF1P32660 1571 aa10.59□□□□□ -0.71
CAR2YLR438W RPO21P04050 1733 aaKnown RBP10.58□□□□□ -0.72
CAR2YLR438W GEA2P39993 1459 aaKnown RBP10.57□□□□□ -0.72
CAR2YLR438W RTT106P40161 455 aa10.57□□□□□ -0.72
CAR2YLR438W TY3B-GQ99315 1547 aa10.55□□□□□ -0.72
CAR2YLR438W SSM4P40318 1319 aa10.53□□□□□ -0.72
CAR2YLR438W IRC20Q06554 1556 aa10.52□□□□□ -0.72
CAR2YLR438W YBT1P32386 1661 aa10.51□□□□□ -0.73
CAR2YLR438W CAT8P39113 1433 aa10.5□□□□□ -0.73
CAR2YLR438W NUP159P40477 1460 aa10.5□□□□□ -0.73
CAR2YLR438W VPS15P22219 1454 aa10.49□□□□□ -0.73
CAR2YLR438W PDR12Q02785 1511 aa10.41□□□□□ -0.74
CAR2YLR438W MET5P47169 1442 aa10.41□□□□□ -0.74
CAR2YLR438W MET10P39692 1035 aa10.39□□□□□ -0.75
CAR2YLR438W PDR10P51533 1564 aa10.38□□□□□ -0.75
CAR2YLR438W ARO1P08566 1588 aaKnown RBP10.37□□□□□ -0.75
CAR2YLR438W SRB8P25648 1427 aa10.37□□□□□ -0.75
CAR2YLR438W SPO14P36126 1683 aa10.37□□□□□ -0.75
CAR2YLR438W GDB1Q06625 1536 aa10.37□□□□□ -0.75
CAR2YLR438W YRF1-1P0CX20 1796 aa10.37□□□□□ -0.75
CAR2YLR438W YRF1-5P0CX21 1796 aa10.37□□□□□ -0.75
CAR2YLR438W YRF1-8P0CX22 1796 aa10.37□□□□□ -0.75
CAR2YLR438W NUP157P40064 1391 aaKnown RBP10.34□□□□□ -0.75
CAR2YLR438W CKB1P43639 278 aa10.32□□□□□ -0.76
CAR2YLR438W GCN2P15442 1659 aa10.25□□□□□ -0.77
CAR2YLR438W MMS1Q06211 1407 aa10.24□□□□□ -0.77
CAR2YLR438W BUD3P25558 1636 aa10.24□□□□□ -0.77
CAR2YLR438W IQG1Q12280 1495 aa10.23□□□□□ -0.77
CAR2YLR438W BUD21Q08492 214 aaPredicted RBP10.22□□□□□ -0.77
CAR2YLR438W YSP2Q06681 1438 aa10.21□□□□□ -0.78
CAR2YLR438W LTE1P07866 1435 aa10.16□□□□□ -0.78
CAR2YLR438W POL5P39985 1022 aaKnown RBP10.15□□□□□ -0.78
CAR2YLR438W BNR1P40450 1375 aa10.14□□□□□ -0.79
CAR2YLR438W NOP7P53261 605 aaKnown RBP10.12□□□□□ -0.79
CAR2YLR438W SEC7P11075 2009 aaKnown RBP10.09□□□□□ -0.79
CAR2YLR438W TRM3Q07527 1436 aa10.09□□□□□ -0.79
CAR2YLR438W YOR093CQ12275 1648 aa10.09□□□□□ -0.79
CAR2YLR438W DOP1Q03921 1698 aa10.09□□□□□ -0.79
CAR2YLR438W PAF1P38351 445 aa10.08□□□□□ -0.8
CAR2YLR438W PDR5P33302 1511 aaKnown RBP10.07□□□□□ -0.8
CAR2YLR438W CHC1P22137 1653 aaKnown RBP10.06□□□□□ -0.8
CAR2YLR438W DRS2P39524 1355 aa10.06□□□□□ -0.8
CAR2YLR438W BFR2Q06631 534 aaKnown RBP10.01□□□□□ -0.81
CAR2YLR438W SEC3P33332 1336 aaKnown RBP9.97□□□□□ -0.81
CAR2YLR438W VMR1P38735 1592 aa9.96□□□□□ -0.82
CAR2YLR438W NUP188P52593 1655 aaKnown RBP9.96□□□□□ -0.82
CAR2YLR438W RAV1P47104 1357 aa9.95□□□□□ -0.82
CAR2YLR438W IML1P47170 1584 aa9.94□□□□□ -0.82
CAR2YLR438W DNF2Q12675 1612 aa9.93□□□□□ -0.82
CAR2YLR438W RTC1Q08281 1341 aa9.91□□□□□ -0.82
CAR2YLR438W NSR1P27476 414 aaKnown RBP RIP-Chip data9.9□□□□□ -0.82not detected
CAR2YLR438W PDR11P40550 1411 aa9.89□□□□□ -0.83
CAR2YLR438W BNI1P41832 1953 aa9.88□□□□□ -0.83
CAR2YLR438W ENP1P38333 483 aaKnown RBP9.88□□□□□ -0.83
CAR2YLR438W ITT1Q04638 464 aa9.88□□□□□ -0.83
CAR2YLR438W MHP1P43638 1398 aa9.88□□□□□ -0.83
CAR2YLR438W TY3B-IQ7LHG5 1498 aaKnown RBP9.87□□□□□ -0.83
CAR2YLR438W URN1Q06525 465 aaKnown RBP9.86□□□□□ -0.83
CAR2YLR438W SPT7P35177 1332 aa9.85□□□□□ -0.83
CAR2YLR438W ESL2P36168 1195 aa9.83□□□□□ -0.84
CAR2YLR438W ORC1P54784 914 aaPredicted RBP9.83□□□□□ -0.84
CAR2YLR438W TAF5P38129 798 aa9.82□□□□□ -0.84
CAR2YLR438W SCT1P32784 759 aa9.8□□□□□ -0.84
CAR2YLR438W IPL1P38991 367 aa9.79□□□□□ -0.84
CAR2YLR438W NUP192P47054 1683 aa9.79□□□□□ -0.84
CAR2YLR438W YLR419WQ06698 1435 aaKnown RBP9.78□□□□□ -0.84
CAR2YLR438W KIP3P53086 805 aaKnown RBP9.77□□□□□ -0.85
CAR2YLR438W TYS1P36421 394 aaKnown RBP9.75□□□□□ -0.85
CAR2YLR438W YAP3P38749 330 aa9.72□□□□□ -0.85
CAR2YLR438W PDS5Q04264 1277 aa9.72□□□□□ -0.85
CAR2YLR438W LEU3P08638 886 aa9.71□□□□□ -0.86
CAR2YLR438W PSD2P53037 1138 aaKnown RBP9.71□□□□□ -0.86
CAR2YLR438W HAP1P0CE41 1502 aa9.71□□□□□ -0.86
CAR2YLR438W SPE2P21182 396 aa9.69□□□□□ -0.86
CAR2YLR438W BCK1Q01389 1478 aa9.67□□□□□ -0.86
CAR2YLR438W NAP1P25293 417 aaKnown RBP9.67□□□□□ -0.86
CAR2YLR438W NOP2P40991 618 aaKnown RBP9.67□□□□□ -0.86
CAR2YLR438W ALD4P46367 519 aaKnown RBP9.67□□□□□ -0.86
CAR2YLR438W RAD9P14737 1309 aa9.65□□□□□ -0.86
CAR2YLR438W DNF3Q12674 1656 aa9.64□□□□□ -0.87
CAR2YLR438W TAF8Q03750 510 aa9.64□□□□□ -0.87
CAR2YLR438W CAB1Q04430 367 aa9.61□□□□□ -0.87
CAR2YLR438W MLP1Q02455 1875 aaKnown RBP9.6□□□□□ -0.87
CAR2YLR438W PRS1P32895 427 aaKnown RBP9.59□□□□□ -0.87
CAR2YLR438W CHZ1P40019 153 aaPredicted RBP9.58□□□□□ -0.88
CAR2YLR438W MRX12P47084 519 aa9.58□□□□□ -0.88
CAR2YLR438W RTG3P38165 486 aa9.55□□□□□ -0.88
CAR2YLR438W NST1P53935 1240 aa9.54□□□□□ -0.88
CAR2YLR438W KRE5P22023 1365 aa9.53□□□□□ -0.88
CAR2YLR438W FKH1P40466 484 aa9.53□□□□□ -0.88
CAR2YLR438W RIA1P53893 1110 aa9.51□□□□□ -0.89
CAR2YLR438W CFT1Q06632 1357 aaKnown RBP9.5□□□□□ -0.89
CAR2YLR438W MAK10Q02197 733 aa9.5□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms