RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W PTC4P38089 393 aa8.04□□□□□ -1.12
BER1YLR412W XDJ1P39102 459 aa8.01□□□□□ -1.13
BER1YLR412W MGA2P40578 1113 aa8.01□□□□□ -1.13
BER1YLR412W DCW1P36091 449 aa7.99□□□□□ -1.13
BER1YLR412W YEL023CP39992 682 aa7.99□□□□□ -1.13
BER1YLR412W RCR1P38212 213 aa7.96□□□□□ -1.14
BER1YLR412W VRP1P37370 817 aa7.94□□□□□ -1.14
BER1YLR412W YDR344CQ05510 147 aa7.89□□□□□ -1.15
BER1YLR412W ELP4Q02884 456 aaKnown RBP7.85□□□□□ -1.15
BER1YLR412W PML39Q03760 334 aa7.85□□□□□ -1.15
BER1YLR412W DPS1P04802 557 aaKnown RBP7.84□□□□□ -1.15
BER1YLR412W RGA2Q06407 1009 aa7.81□□□□□ -1.16
BER1YLR412W ARH1P48360 493 aa7.8□□□□□ -1.16
BER1YLR412W GRE2Q12068 342 aaKnown RBP7.8□□□□□ -1.16
BER1YLR412W GUT1P32190 709 aa7.71□□□□□ -1.18
BER1YLR412W SPT23P35210 1082 aa7.71□□□□□ -1.18
BER1YLR412W NST1P53935 1240 aa7.71□□□□□ -1.18
BER1YLR412W MID1P41821 548 aa7.7□□□□□ -1.18
BER1YLR412W SRC1Q03707 834 aa7.7□□□□□ -1.18
BER1YLR412W ATH1P48016 1211 aa7.69□□□□□ -1.18
BER1YLR412W PTC3P34221 468 aaKnown RBP7.66□□□□□ -1.18
BER1YLR412W RGA1P39083 1007 aa7.65□□□□□ -1.18
BER1YLR412W MIF2P35201 549 aa7.64□□□□□ -1.19
BER1YLR412W EDS1P38073 919 aa7.64□□□□□ -1.19
BER1YLR412W MPH3P0CE00 602 aa7.62□□□□□ -1.19
BER1YLR412W MAK11P20484 414 aaKnown RBP7.62□□□□□ -1.19
BER1YLR412W SOL3P38858 249 aa7.62□□□□□ -1.19
BER1YLR412W HAP5Q02516 242 aa7.62□□□□□ -1.19
BER1YLR412W AI4P03878 556 aa7.61□□□□□ -1.19
BER1YLR412W PEX29Q03370 554 aa7.61□□□□□ -1.19
BER1YLR412W YML082WQ04533 649 aaKnown RBP7.61□□□□□ -1.19
BER1YLR412W BNI4P53858 892 aa7.6□□□□□ -1.19
BER1YLR412W PTC2P39966 464 aaKnown RBP7.54□□□□□ -1.2
BER1YLR412W RAM2P29703 316 aa7.53□□□□□ -1.2
BER1YLR412W ILV3P39522 585 aaKnown RBP7.53□□□□□ -1.2
BER1YLR412W COQ8P27697 501 aa7.5□□□□□ -1.21
BER1YLR412W MPC54Q08550 464 aa7.49□□□□□ -1.21
BER1YLR412W RAS1P01119 309 aa7.44□□□□□ -1.22
BER1YLR412W YGR273CP53329 174 aa7.44□□□□□ -1.22
BER1YLR412W NMA111P53920 997 aa7.44□□□□□ -1.22
BER1YLR412W NOP53Q12080 455 aaKnown RBP7.41□□□□□ -1.22
BER1YLR412W DPL1Q05567 589 aa7.39□□□□□ -1.23
BER1YLR412W SLI15P38283 698 aa7.38□□□□□ -1.23
BER1YLR412W YPR015CQ12531 247 aa7.38□□□□□ -1.23
BER1YLR412W RAM1P22007 431 aa7.36□□□□□ -1.23
BER1YLR412W TRK1P12685 1235 aa7.34□□□□□ -1.23
BER1YLR412W AMS1P22855 1083 aa7.33□□□□□ -1.24
BER1YLR412W ISU2Q12056 156 aa7.31□□□□□ -1.24
BER1YLR412W GYP1Q08484 637 aa7.27□□□□□ -1.25
BER1YLR412W SDH2P21801 266 aa7.24□□□□□ -1.25
BER1YLR412W SAS4Q04003 481 aa7.24□□□□□ -1.25
BER1YLR412W KEX1P09620 729 aa7.22□□□□□ -1.25
BER1YLR412W YPL062WQ02781 134 aa7.21□□□□□ -1.26
BER1YLR412W DMA1P38823 416 aa7.2□□□□□ -1.26
BER1YLR412W CDC73Q06697 393 aa7.19□□□□□ -1.26
BER1YLR412W SET1P38827 1080 aaKnown RBP7.18□□□□□ -1.26
BER1YLR412W PDR1P12383 1068 aa7.17□□□□□ -1.26
BER1YLR412W YEL077CQ3E7X8 1277 aa7.17□□□□□ -1.26
BER1YLR412W MRF1P30775 413 aaPredicted RBP7.11□□□□□ -1.27
BER1YLR412W UBP14P38237 781 aaKnown RBP7.09□□□□□ -1.27
BER1YLR412W YLR326WQ06170 240 aaKnown RBP7.09□□□□□ -1.27
BER1YLR412W BUD20Q08004 166 aaPredicted RBP7.05□□□□□ -1.28
BER1YLR412W RQC2Q12532 1038 aaKnown RBP7.05□□□□□ -1.28
BER1YLR412W RPP1BP10622 106 aaKnown RBP7.04□□□□□ -1.28
BER1YLR412W PCS60P38137 543 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
BER1YLR412W IFH1P39520 1085 aa7.03□□□□□ -1.28
BER1YLR412W BRE2P43132 505 aa7.03□□□□□ -1.28
BER1YLR412W PRT1P06103 763 aaKnown RBP7.02□□□□□ -1.29
BER1YLR412W VHR2P40041 505 aa7.01□□□□□ -1.29
BER1YLR412W RAD54P32863 898 aa7□□□□□ -1.29
BER1YLR412W GCR2Q01722 534 aa7□□□□□ -1.29
BER1YLR412W YPR148CQ06523 435 aa6.98□□□□□ -1.29
BER1YLR412W ERG12P07277 443 aa6.97□□□□□ -1.29
BER1YLR412W GAR1P28007 205 aaKnown RBP6.97□□□□□ -1.29
BER1YLR412W AIR1P40507 360 aaKnown RBP6.97□□□□□ -1.29
BER1YLR412W VPS70P47161 811 aa6.97□□□□□ -1.29
BER1YLR412W STR2P47164 639 aa6.96□□□□□ -1.3
BER1YLR412W YRR1Q12172 810 aa6.95□□□□□ -1.3
BER1YLR412W CST6P40535 587 aa6.94□□□□□ -1.3
BER1YLR412W ISM1P48526 1002 aa6.94□□□□□ -1.3
BER1YLR412W CLA4P48562 842 aa6.94□□□□□ -1.3
BER1YLR412W GBP2P25555 427 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
BER1YLR412W GAP1P19145 602 aaPredicted RBP6.92□□□□□ -1.3
BER1YLR412W SAS10Q12136 610 aaPredicted RBP6.91□□□□□ -1.3
BER1YLR412W REF2P42073 533 aaPredicted RBP6.9□□□□□ -1.3
BER1YLR412W PEX21P50091 288 aa6.9□□□□□ -1.3
BER1YLR412W YDR090CQ03193 310 aa6.9□□□□□ -1.3
BER1YLR412W LAM6Q08001 693 aa6.9□□□□□ -1.3
BER1YLR412W TFB4Q12004 338 aa6.9□□□□□ -1.3
BER1YLR412W NUD1P32336 851 aa6.88□□□□□ -1.31
BER1YLR412W CSC1Q06538 782 aa6.88□□□□□ -1.31
BER1YLR412W CDC4P07834 779 aa6.87□□□□□ -1.31
BER1YLR412W MET22P32179 357 aa6.86□□□□□ -1.31
BER1YLR412W ENV9Q08651 330 aa6.85□□□□□ -1.31
BER1YLR412W KIC1P38692 1080 aa6.84□□□□□ -1.31
BER1YLR412W CKB1P43639 278 aa6.84□□□□□ -1.31
BER1YLR412W TUM1Q08686 304 aaKnown RBP6.84□□□□□ -1.31
BER1YLR412W TY1A-DR4O74302 440 aa6.83□□□□□ -1.32
BER1YLR412W TY1A-HP0C2I4 478 aaKnown RBP6.83□□□□□ -1.32
BER1YLR412W TY1A-AP0CX57 440 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms