RNA–Protein interactions for RNA: YLR339C

YLR339C, Transcript of Dubious open reading frame, yeastyeast

Gene YLR339C, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR339CYLR339C TRP5P00931 707 aaKnown RBP8.36□□□□□ -1.07
YLR339CYLR339C CKB1P43639 278 aa8.33□□□□□ -1.08
YLR339CYLR339C SIS1P25294 352 aaKnown RBP8.3□□□□□ -1.08
YLR339CYLR339C YEL023CP39992 682 aa8.3□□□□□ -1.08
YLR339CYLR339C LDB19Q12502 818 aa8.3□□□□□ -1.08
YLR339CYLR339C IOC2Q12072 812 aa8.29□□□□□ -1.08
YLR339CYLR339C YGR273CP53329 174 aa8.28□□□□□ -1.08
YLR339CYLR339C REF2P42073 533 aaPredicted RBP8.27□□□□□ -1.09
YLR339CYLR339C SPB4P25808 606 aaPredicted RBP8.26□□□□□ -1.09
YLR339CYLR339C PTC4P38089 393 aa8.26□□□□□ -1.09
YLR339CYLR339C JIP4Q03361 876 aa8.26□□□□□ -1.09
YLR339CYLR339C SOL3P38858 249 aa8.25□□□□□ -1.09
YLR339CYLR339C VHR2P40041 505 aa8.25□□□□□ -1.09
YLR339CYLR339C YNL035CP53962 389 aaKnown RBP8.25□□□□□ -1.09
YLR339CYLR339C RTG1P32607 177 aa8.24□□□□□ -1.09
YLR339CYLR339C PBS2P08018 668 aa8.21□□□□□ -1.1
YLR339CYLR339C TFG1P41895 735 aaPredicted RBP8.21□□□□□ -1.1
YLR339CYLR339C AI4P03878 556 aa8.19□□□□□ -1.1
YLR339CYLR339C MPH3P0CE00 602 aa8.19□□□□□ -1.1
YLR339CYLR339C SEC61P32915 480 aa8.19□□□□□ -1.1
YLR339CYLR339C NST1P53935 1240 aa8.19□□□□□ -1.1
YLR339CYLR339C KEX1P09620 729 aa8.18□□□□□ -1.1
YLR339CYLR339C UBP14P38237 781 aaKnown RBP8.18□□□□□ -1.1
YLR339CYLR339C KIC1P38692 1080 aa8.18□□□□□ -1.1
YLR339CYLR339C DAN4P47179 1161 aa8.18□□□□□ -1.1
YLR339CYLR339C YLR326WQ06170 240 aaKnown RBP8.17□□□□□ -1.1
YLR339CYLR339C NCR1Q12200 1170 aa8.17□□□□□ -1.1
YLR339CYLR339C FKH1P40466 484 aa8.16□□□□□ -1.1
YLR339CYLR339C MAK21Q12176 1025 aaKnown RBP8.16□□□□□ -1.1
YLR339CYLR339C RAD54P32863 898 aa8.15□□□□□ -1.1
YLR339CYLR339C COX6P00427 148 aa8.13□□□□□ -1.11
YLR339CYLR339C ILV3P39522 585 aaKnown RBP8.13□□□□□ -1.11
YLR339CYLR339C PML39Q03760 334 aa8.13□□□□□ -1.11
YLR339CYLR339C MAM3Q12296 706 aa8.12□□□□□ -1.11
YLR339CYLR339C PCS60P38137 543 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
YLR339CYLR339C DSF2P38213 736 aa8.11□□□□□ -1.11
YLR339CYLR339C YDR090CQ03193 310 aa8.11□□□□□ -1.11
YLR339CYLR339C YJL171CP46992 396 aa8.1□□□□□ -1.11
YLR339CYLR339C AIR2Q12476 344 aaKnown RBP8.1□□□□□ -1.11
YLR339CYLR339C SLI15P38283 698 aa8.07□□□□□ -1.12
YLR339CYLR339C PEX29Q03370 554 aa8.07□□□□□ -1.12
YLR339CYLR339C YDL129WQ07555 291 aa8.07□□□□□ -1.12
YLR339CYLR339C LEU3P08638 886 aa8.06□□□□□ -1.12
YLR339CYLR339C MID1P41821 548 aa8.06□□□□□ -1.12
YLR339CYLR339C SAP30P38429 201 aa8.05□□□□□ -1.12
YLR339CYLR339C IES2P40154 320 aa8.05□□□□□ -1.12
YLR339CYLR339C RPP1BP10622 106 aaKnown RBP8.04□□□□□ -1.12
YLR339CYLR339C BMT6Q12291 365 aa8.04□□□□□ -1.12
YLR339CYLR339C CDC73Q06697 393 aa7.99□□□□□ -1.13
YLR339CYLR339C DPL1Q05567 589 aa7.97□□□□□ -1.13
YLR339CYLR339C MPC54Q08550 464 aa7.97□□□□□ -1.13
YLR339CYLR339C DIT2P21595 489 aa7.95□□□□□ -1.14
YLR339CYLR339C NUP42P49686 430 aaKnown RBP7.95□□□□□ -1.14
YLR339CYLR339C PEX21P50091 288 aa7.95□□□□□ -1.14
YLR339CYLR339C ORC6P38826 435 aa7.94□□□□□ -1.14
YLR339CYLR339C ELP4Q02884 456 aaKnown RBP7.93□□□□□ -1.14
YLR339CYLR339C YNR021WP53723 404 aaKnown RBP7.92□□□□□ -1.14
YLR339CYLR339C NMA111P53920 997 aa7.92□□□□□ -1.14
YLR339CYLR339C CSC1Q06538 782 aa7.92□□□□□ -1.14
YLR339CYLR339C PSE1P32337 1089 aaKnown RBP7.91□□□□□ -1.14
YLR339CYLR339C RPN1P38764 993 aaKnown RBP7.91□□□□□ -1.14
YLR339CYLR339C ARH1P48360 493 aa7.9□□□□□ -1.14
YLR339CYLR339C HAP5Q02516 242 aa7.9□□□□□ -1.14
YLR339CYLR339C ISU2Q12056 156 aa7.9□□□□□ -1.14
YLR339CYLR339C GLC3P32775 704 aa7.89□□□□□ -1.15
YLR339CYLR339C ATF2P53296 535 aa7.89□□□□□ -1.15
YLR339CYLR339C PRE3P38624 215 aa7.87□□□□□ -1.15
YLR339CYLR339C MVP1P40959 511 aaKnown RBP7.87□□□□□ -1.15
YLR339CYLR339C TFB4Q12004 338 aa7.87□□□□□ -1.15
YLR339CYLR339C GAP1P19145 602 aaPredicted RBP7.86□□□□□ -1.15
YLR339CYLR339C RGR1P19263 1082 aa7.86□□□□□ -1.15
YLR339CYLR339C YDR344CQ05510 147 aa7.86□□□□□ -1.15
YLR339CYLR339C TUM1Q08686 304 aaKnown RBP7.86□□□□□ -1.15
YLR339CYLR339C LEO1P38439 464 aa7.85□□□□□ -1.15
YLR339CYLR339C CHL1P22516 861 aaPredicted RBP7.84□□□□□ -1.15
YLR339CYLR339C YRR1Q12172 810 aa7.84□□□□□ -1.15
YLR339CYLR339C SPT23P35210 1082 aa7.82□□□□□ -1.16
YLR339CYLR339C TEA1P47988 759 aa7.82□□□□□ -1.16
YLR339CYLR339C YPR109WQ06104 294 aa7.82□□□□□ -1.16
YLR339CYLR339C CLB5P30283 435 aa7.81□□□□□ -1.16
YLR339CYLR339C AIM7Q12156 149 aa7.81□□□□□ -1.16
YLR339CYLR339C BNI4P53858 892 aa7.8□□□□□ -1.16
YLR339CYLR339C PTC2P39966 464 aaKnown RBP7.79□□□□□ -1.16
YLR339CYLR339C PDR1P12383 1068 aa7.76□□□□□ -1.17
YLR339CYLR339C KIN1P13185 1064 aa7.76□□□□□ -1.17
YLR339CYLR339C NPL4P33755 580 aa7.75□□□□□ -1.17
YLR339CYLR339C NUD1P32336 851 aa7.73□□□□□ -1.17
YLR339CYLR339C YMR196WQ04336 1088 aa7.72□□□□□ -1.17
YLR339CYLR339C YML082WQ04533 649 aaKnown RBP7.7□□□□□ -1.18
YLR339CYLR339C NIS1P53939 407 aa7.69□□□□□ -1.18
YLR339CYLR339C RAM1P22007 431 aa7.67□□□□□ -1.18
YLR339CYLR339C VRP1P37370 817 aa7.67□□□□□ -1.18
YLR339CYLR339C FPK1P53739 893 aa7.66□□□□□ -1.18
YLR339CYLR339C GCD11P32481 527 aaKnown RBP7.65□□□□□ -1.18
YLR339CYLR339C BCK2P33306 851 aa7.65□□□□□ -1.18
YLR339CYLR339C STR2P47164 639 aa7.65□□□□□ -1.18
YLR339CYLR339C ISM1P48526 1002 aa7.65□□□□□ -1.18
YLR339CYLR339C YPR015CQ12531 247 aa7.65□□□□□ -1.18
YLR339CYLR339C KEX2P13134 814 aa7.63□□□□□ -1.19
YLR339CYLR339C CSN12P47130 423 aa7.63□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms