RNA–Protein interactions for RNA: YLR263W

RED1, Transcript of Protein component of the synaptonemal complex axial elements, yeast

Gene RED1, Length 2,484 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RED1	YLR263W	HTA1	P04911	132 aa	Known RBP	5.23	□□□□□ -1.57
RED1	YLR263W	HTA2	P04912	132 aa		5.23	□□□□□ -1.57
RED1	YLR263W	RAM2	P29703	316 aa		5.23	□□□□□ -1.57
RED1	YLR263W	YPR148C	Q06523	435 aa		5.23	□□□□□ -1.57
RED1	YLR263W	DBP1	P24784	617 aa	Known RBP	5.22	□□□□□ -1.57
RED1	YLR263W	VRP1	P37370	817 aa		5.21	□□□□□ -1.57
RED1	YLR263W	GYP5	Q12344	894 aa		5.21	□□□□□ -1.57
RED1	YLR263W	DPS1	P04802	557 aa	Known RBP	5.21	□□□□□ -1.58
RED1	YLR263W	VMA1	P17255	1071 aa	Known RBP	5.19	□□□□□ -1.58
RED1	YLR263W	CKB1	P43639	278 aa		5.19	□□□□□ -1.58
RED1	YLR263W	RLF2	Q12495	606 aa		5.19	□□□□□ -1.58
RED1	YLR263W	SET1	P38827	1080 aa	Known RBP	5.18	□□□□□ -1.58
RED1	YLR263W	RTG3	P38165	486 aa		5.18	□□□□□ -1.58
RED1	YLR263W	YFR006W	P43590	535 aa		5.18	□□□□□ -1.58
RED1	YLR263W	SAM3	Q08986	587 aa		5.17	□□□□□ -1.58
RED1	YLR263W	DCW1	P36091	449 aa		5.16	□□□□□ -1.58
RED1	YLR263W	RCR1	P38212	213 aa		5.16	□□□□□ -1.58
RED1	YLR263W	VPS70	P47161	811 aa		5.15	□□□□□ -1.58
RED1	YLR263W	PEX29	Q03370	554 aa		5.14	□□□□□ -1.59
RED1	YLR263W	SPB4	P25808	606 aa	Predicted RBP	5.14	□□□□□ -1.59
RED1	YLR263W	PTC4	P38089	393 aa		5.14	□□□□□ -1.59
RED1	YLR263W	DSF2	P38213	736 aa		5.14	□□□□□ -1.59
RED1	YLR263W	YEL023C	P39992	682 aa		5.09	□□□□□ -1.59
RED1	YLR263W	IFH1	P39520	1085 aa		5.08	□□□□□ -1.6
RED1	YLR263W	KIN1	P13185	1064 aa		5.07	□□□□□ -1.6
RED1	YLR263W	DAN4	P47179	1161 aa		5.07	□□□□□ -1.6
RED1	YLR263W	PBS2	P08018	668 aa		5.06	□□□□□ -1.6
RED1	YLR263W	YNR021W	P53723	404 aa	Known RBP	5.06	□□□□□ -1.6
RED1	YLR263W	MAK11	P20484	414 aa	Known RBP	5.05	□□□□□ -1.6
RED1	YLR263W	SPT23	P35210	1082 aa		5.04	□□□□□ -1.6
RED1	YLR263W	VPS29	P38759	282 aa		5.03	□□□□□ -1.6
RED1	YLR263W	PML39	Q03760	334 aa		5.03	□□□□□ -1.6
RED1	YLR263W	GRE2	Q12068	342 aa	Known RBP	5.03	□□□□□ -1.6
RED1	YLR263W	GLC3	P32775	704 aa		5.02	□□□□□ -1.61
RED1	YLR263W	AIM7	Q12156	149 aa		5.02	□□□□□ -1.61
RED1	YLR263W	NUP42	P49686	430 aa	Known RBP	5.02	□□□□□ -1.61
RED1	YLR263W	STS1	P38637	319 aa		5	□□□□□ -1.61
RED1	YLR263W	ATH1	P48016	1211 aa		5	□□□□□ -1.61
RED1	YLR263W	DIT2	P21595	489 aa		5	□□□□□ -1.61
RED1	YLR263W	GUA1	P38625	525 aa	Known RBP	5	□□□□□ -1.61
RED1	YLR263W	RGA2	Q06407	1009 aa		5	□□□□□ -1.61
RED1	YLR263W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
RED1	YLR263W	RGA1	P39083	1007 aa		4.99	□□□□□ -1.61
RED1	YLR263W	COQ8	P27697	501 aa		4.98	□□□□□ -1.61
RED1	YLR263W	ARH1	P48360	493 aa		4.98	□□□□□ -1.61
RED1	YLR263W	IES2	P40154	320 aa		4.97	□□□□□ -1.61
RED1	YLR263W	MAM3	Q12296	706 aa		4.97	□□□□□ -1.61
RED1	YLR263W	PTC2	P39966	464 aa	Known RBP	4.96	□□□□□ -1.62
RED1	YLR263W	EDS1	P38073	919 aa		4.94	□□□□□ -1.62
RED1	YLR263W	NOP8	Q08287	484 aa	Predicted RBP	4.94	□□□□□ -1.62
RED1	YLR263W	REF2	P42073	533 aa	Predicted RBP	4.93	□□□□□ -1.62
RED1	YLR263W	NOP53	Q12080	455 aa	Known RBP	4.93	□□□□□ -1.62
RED1	YLR263W	HPC2	Q01448	625 aa		4.91	□□□□□ -1.62
RED1	YLR263W	HAP5	Q02516	242 aa		4.91	□□□□□ -1.62
RED1	YLR263W	YML020W	Q03722	664 aa		4.91	□□□□□ -1.62
RED1	YLR263W	COX6	P00427	148 aa		4.9	□□□□□ -1.63
RED1	YLR263W	MIF2	P35201	549 aa		4.9	□□□□□ -1.63
RED1	YLR263W	MAK21	Q12176	1025 aa	Known RBP	4.9	□□□□□ -1.63
RED1	YLR263W	ORC1	P54784	914 aa	Predicted RBP	4.89	□□□□□ -1.63
RED1	YLR263W	TFB3	Q03290	321 aa		4.89	□□□□□ -1.63
RED1	YLR263W	GUT1	P32190	709 aa		4.89	□□□□□ -1.63
RED1	YLR263W	TRK1	P12685	1235 aa		4.88	□□□□□ -1.63
RED1	YLR263W	HGH1	P48362	394 aa	Known RBP	4.87	□□□□□ -1.63
RED1	YLR263W	SUB2	Q07478	446 aa	Known RBP	4.87	□□□□□ -1.63
RED1	YLR263W	PKC1	P24583	1151 aa		4.87	□□□□□ -1.63
RED1	YLR263W	BNI4	P53858	892 aa		4.87	□□□□□ -1.63
RED1	YLR263W	YDR090C	Q03193	310 aa		4.87	□□□□□ -1.63
RED1	YLR263W	GLN1	P32288	370 aa	Known RBP	4.86	□□□□□ -1.63
RED1	YLR263W	SSA1	P10591	642 aa	Known RBP	4.84	□□□□□ -1.63
RED1	YLR263W	GEF1	P37020	779 aa		4.84	□□□□□ -1.63
RED1	YLR263W	GYP1	Q08484	637 aa		4.84	□□□□□ -1.63
RED1	YLR263W	SLX8	P40072	274 aa		4.83	□□□□□ -1.64
RED1	YLR263W	ATF2	P53296	535 aa		4.83	□□□□□ -1.64
RED1	YLR263W	YML082W	Q04533	649 aa	Known RBP	4.83	□□□□□ -1.64
RED1	YLR263W	PTC3	P34221	468 aa	Known RBP	4.83	□□□□□ -1.64
RED1	YLR263W	UBP14	P38237	781 aa	Known RBP	4.82	□□□□□ -1.64
RED1	YLR263W	YEL077C	Q3E7X8	1277 aa		4.82	□□□□□ -1.64
RED1	YLR263W	MID1	P41821	548 aa		4.82	□□□□□ -1.64
RED1	YLR263W	ATG32	P40458	529 aa		4.81	□□□□□ -1.64
RED1	YLR263W	GCR2	Q01722	534 aa		4.81	□□□□□ -1.64
RED1	YLR263W	BIM1	P40013	344 aa		4.8	□□□□□ -1.64
RED1	YLR263W	KTR1	P27810	393 aa	Known RBP	4.8	□□□□□ -1.64
RED1	YLR263W	YLR326W	Q06170	240 aa	Known RBP	4.79	□□□□□ -1.64
RED1	YLR263W	BRL1	P38770	471 aa		4.78	□□□□□ -1.64
RED1	YLR263W	VHR2	P40041	505 aa		4.78	□□□□□ -1.64
RED1	YLR263W	AI4	P03878	556 aa		4.78	□□□□□ -1.64
RED1	YLR263W	SRC1	Q03707	834 aa		4.78	□□□□□ -1.64
RED1	YLR263W	MPH3	P0CE00	602 aa		4.77	□□□□□ -1.65
RED1	YLR263W	RPP1B	P10622	106 aa	Known RBP	4.77	□□□□□ -1.65
RED1	YLR263W	MRX12	P47084	519 aa		4.77	□□□□□ -1.65
RED1	YLR263W	ERG12	P07277	443 aa		4.76	□□□□□ -1.65
RED1	YLR263W	CSN12	P47130	423 aa		4.76	□□□□□ -1.65
RED1	YLR263W	SSA2	P10592	639 aa	Known RBP	4.75	□□□□□ -1.65
RED1	YLR263W	AMS1	P22855	1083 aa		4.75	□□□□□ -1.65
RED1	YLR263W	PSE1	P32337	1089 aa	Known RBP	4.75	□□□□□ -1.65
RED1	YLR263W	YJL007C	P47080	104 aa		4.75	□□□□□ -1.65
RED1	YLR263W	YDR344C	Q05510	147 aa		4.75	□□□□□ -1.65
RED1	YLR263W	TIF1	P10081	395 aa	Known RBP	4.74	□□□□□ -1.65
RED1	YLR263W	MRF1	P30775	413 aa	Predicted RBP	4.74	□□□□□ -1.65
RED1	YLR263W	NOB1	Q08444	459 aa	Known RBP	4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms