RNA–Protein interactions for RNA: YLR254C

NDL1, Transcript of Homolog of nuclear distribution factor NudE, yeastyeast

Gene NDL1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDL1YLR254C YEL023CP39992 682 aa10.57□□□□□ -0.72
NDL1YLR254C PTC4P38089 393 aa10.55□□□□□ -0.72
NDL1YLR254C RAM2P29703 316 aa10.53□□□□□ -0.72
NDL1YLR254C GRE2Q12068 342 aaKnown RBP10.53□□□□□ -0.72
NDL1YLR254C MAK11P20484 414 aaKnown RBP10.52□□□□□ -0.73
NDL1YLR254C YDL129WQ07555 291 aa10.52□□□□□ -0.73
NDL1YLR254C ATH1P48016 1211 aa10.46□□□□□ -0.73
NDL1YLR254C EDS1P38073 919 aa10.45□□□□□ -0.74
NDL1YLR254C PTC3P34221 468 aaKnown RBP10.44□□□□□ -0.74
NDL1YLR254C CHL1P22516 861 aaPredicted RBP10.4□□□□□ -0.74
NDL1YLR254C GUT1P32190 709 aa10.4□□□□□ -0.74
NDL1YLR254C COQ8P27697 501 aa10.39□□□□□ -0.75
NDL1YLR254C PML39Q03760 334 aa10.39□□□□□ -0.75
NDL1YLR254C PRE3P38624 215 aa10.37□□□□□ -0.75
NDL1YLR254C BCK2P33306 851 aa10.33□□□□□ -0.76
NDL1YLR254C YDR344CQ05510 147 aa10.28□□□□□ -0.76
NDL1YLR254C ELP4Q02884 456 aaKnown RBP10.27□□□□□ -0.77
NDL1YLR254C SOL3P38858 249 aa10.26□□□□□ -0.77
NDL1YLR254C MID1P41821 548 aa10.26□□□□□ -0.77
NDL1YLR254C NST1P53935 1240 aa10.24□□□□□ -0.77
NDL1YLR254C MPH3P0CE00 602 aa10.19□□□□□ -0.78
NDL1YLR254C VRP1P37370 817 aa10.19□□□□□ -0.78
NDL1YLR254C PEX29Q03370 554 aa10.18□□□□□ -0.78
NDL1YLR254C AI4P03878 556 aa10.17□□□□□ -0.78
NDL1YLR254C ARH1P48360 493 aa10.15□□□□□ -0.78
NDL1YLR254C NOP53Q12080 455 aaKnown RBP10.15□□□□□ -0.78
NDL1YLR254C ILV3P39522 585 aaKnown RBP10.12□□□□□ -0.79
NDL1YLR254C YGR273CP53329 174 aa10.12□□□□□ -0.79
NDL1YLR254C XDJ1P39102 459 aa10.09□□□□□ -0.79
NDL1YLR254C SPT23P35210 1082 aa10.05□□□□□ -0.8
NDL1YLR254C HAP5Q02516 242 aa10.04□□□□□ -0.8
NDL1YLR254C MPC54Q08550 464 aa10.01□□□□□ -0.81
NDL1YLR254C SLI15P38283 698 aa9.99□□□□□ -0.81
NDL1YLR254C SET1P38827 1080 aaKnown RBP9.99□□□□□ -0.81
NDL1YLR254C NMA111P53920 997 aa9.96□□□□□ -0.82
NDL1YLR254C BNI4P53858 892 aa9.95□□□□□ -0.82
NDL1YLR254C PTC2P39966 464 aaKnown RBP9.94□□□□□ -0.82
NDL1YLR254C KEX1P09620 729 aa9.92□□□□□ -0.82
NDL1YLR254C DPL1Q05567 589 aa9.92□□□□□ -0.82
NDL1YLR254C DPS1P04802 557 aaKnown RBP9.91□□□□□ -0.82
NDL1YLR254C YML082WQ04533 649 aaKnown RBP9.88□□□□□ -0.83
NDL1YLR254C VHR2P40041 505 aa9.85□□□□□ -0.83
NDL1YLR254C UBP14P38237 781 aaKnown RBP9.83□□□□□ -0.84
NDL1YLR254C YLR326WQ06170 240 aaKnown RBP9.82□□□□□ -0.84
NDL1YLR254C CDC73Q06697 393 aa9.82□□□□□ -0.84
NDL1YLR254C ISU2Q12056 156 aa9.81□□□□□ -0.84
NDL1YLR254C PCS60P38137 543 aaKnown RBP RIP-Chip data9.76□□□□□ -0.85not detected
NDL1YLR254C RAD54P32863 898 aa9.75□□□□□ -0.85
NDL1YLR254C YPR015CQ12531 247 aa9.73□□□□□ -0.85
NDL1YLR254C RAM1P22007 431 aa9.7□□□□□ -0.86
NDL1YLR254C RPP1BP10622 106 aaKnown RBP9.68□□□□□ -0.86
NDL1YLR254C PDR1P12383 1068 aa9.68□□□□□ -0.86
NDL1YLR254C IFH1P39520 1085 aa9.68□□□□□ -0.86
NDL1YLR254C GYP1Q08484 637 aa9.67□□□□□ -0.86
NDL1YLR254C KIC1P38692 1080 aa9.66□□□□□ -0.86
NDL1YLR254C YDR090CQ03193 310 aa9.63□□□□□ -0.87
NDL1YLR254C RAS1P01119 309 aa9.61□□□□□ -0.87
NDL1YLR254C SRC1Q03707 834 aa9.6□□□□□ -0.87
NDL1YLR254C REF2P42073 533 aaPredicted RBP9.58□□□□□ -0.88
NDL1YLR254C PEX21P50091 288 aa9.58□□□□□ -0.88
NDL1YLR254C YRR1Q12172 810 aa9.56□□□□□ -0.88
NDL1YLR254C YPR148CQ06523 435 aa9.55□□□□□ -0.88
NDL1YLR254C VPS70P47161 811 aa9.54□□□□□ -0.88
NDL1YLR254C SAS4Q04003 481 aa9.53□□□□□ -0.88
NDL1YLR254C AMS1P22855 1083 aa9.5□□□□□ -0.89
NDL1YLR254C TUM1Q08686 304 aaKnown RBP9.49□□□□□ -0.89
NDL1YLR254C CSC1Q06538 782 aa9.48□□□□□ -0.89
NDL1YLR254C BUD20Q08004 166 aaPredicted RBP9.48□□□□□ -0.89
NDL1YLR254C GAP1P19145 602 aaPredicted RBP9.46□□□□□ -0.9
NDL1YLR254C SDH2P21801 266 aa9.46□□□□□ -0.9
NDL1YLR254C TFB4Q12004 338 aa9.46□□□□□ -0.9
NDL1YLR254C PRT1P06103 763 aaKnown RBP9.44□□□□□ -0.9
NDL1YLR254C COX6P00427 148 aa9.43□□□□□ -0.9
NDL1YLR254C ISM1P48526 1002 aa9.43□□□□□ -0.9
NDL1YLR254C MRF1P30775 413 aaPredicted RBP9.42□□□□□ -0.9
NDL1YLR254C NUD1P32336 851 aa9.42□□□□□ -0.9
NDL1YLR254C STR2P47164 639 aa9.42□□□□□ -0.9
NDL1YLR254C YEL077CQ3E7X8 1277 aa9.42□□□□□ -0.9
NDL1YLR254C ORC6P38826 435 aa9.41□□□□□ -0.9
NDL1YLR254C NPL4P33755 580 aa9.4□□□□□ -0.9
NDL1YLR254C MAK21Q12176 1025 aaKnown RBP9.39□□□□□ -0.91
NDL1YLR254C TRK1P12685 1235 aa9.37□□□□□ -0.91
NDL1YLR254C GCD11P32481 527 aaKnown RBP9.36□□□□□ -0.91
NDL1YLR254C MVP1P40959 511 aaKnown RBP9.36□□□□□ -0.91
NDL1YLR254C ERG12P07277 443 aa9.34□□□□□ -0.91
NDL1YLR254C YPR109WQ06104 294 aa9.33□□□□□ -0.92
NDL1YLR254C RGR1P19263 1082 aa9.3□□□□□ -0.92
NDL1YLR254C SPT16P32558 1035 aaKnown RBP9.29□□□□□ -0.92
NDL1YLR254C SEC2P17065 759 aa9.28□□□□□ -0.92
NDL1YLR254C TY1A-DR4O74302 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-HP0C2I4 478 aaKnown RBP9.26□□□□□ -0.93
NDL1YLR254C TY1A-AP0CX57 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-PR1P0CX58 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-ORP0CX59 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-PR2P0CX60 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-DR5P0CX65 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-ER2P0CX66 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-GR3P0CX67 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-LR1P0CX68 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-MR2P0CX69 440 aa9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms