RNA–Protein interactions for RNA: YLR243W

GPN3, Transcript of Putative GTPase with a role in biogenesis of RNA pol II and polIII, yeastyeast

Gene GPN3, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GPN3YLR243W NST1P53935 1240 aa8.79□□□□□ -1
GPN3YLR243W IOC2Q12072 812 aa8.79□□□□□ -1
GPN3YLR243W IFH1P39520 1085 aa8.78□□□□□ -1
GPN3YLR243W HTA1P04911 132 aaKnown RBP8.76□□□□□ -1.01
GPN3YLR243W HTA2P04912 132 aa8.76□□□□□ -1.01
GPN3YLR243W LDB19Q12502 818 aa8.75□□□□□ -1.01
GPN3YLR243W FKH1P40466 484 aa8.74□□□□□ -1.01
GPN3YLR243W YGR273CP53329 174 aa8.73□□□□□ -1.01
GPN3YLR243W ILV3P39522 585 aaKnown RBP8.71□□□□□ -1.02
GPN3YLR243W YEL023CP39992 682 aa8.71□□□□□ -1.02
GPN3YLR243W AIR2Q12476 344 aaKnown RBP8.69□□□□□ -1.02
GPN3YLR243W VHR2P40041 505 aa8.68□□□□□ -1.02
GPN3YLR243W DAN4P47179 1161 aa8.67□□□□□ -1.02
GPN3YLR243W YNL035CP53962 389 aaKnown RBP8.67□□□□□ -1.02
GPN3YLR243W RTG1P32607 177 aa8.66□□□□□ -1.02
GPN3YLR243W YLR326WQ06170 240 aaKnown RBP8.66□□□□□ -1.02
GPN3YLR243W UBP14P38237 781 aaKnown RBP8.65□□□□□ -1.02
GPN3YLR243W JIP4Q03361 876 aa8.65□□□□□ -1.02
GPN3YLR243W REF2P42073 533 aaPredicted RBP8.64□□□□□ -1.03
GPN3YLR243W CKB1P43639 278 aa8.64□□□□□ -1.03
GPN3YLR243W MPH3P0CE00 602 aa8.63□□□□□ -1.03
GPN3YLR243W SEC61P32915 480 aa8.63□□□□□ -1.03
GPN3YLR243W PTC4P38089 393 aa8.63□□□□□ -1.03
GPN3YLR243W KEX1P09620 729 aa8.62□□□□□ -1.03
GPN3YLR243W YDR090CQ03193 310 aa8.62□□□□□ -1.03
GPN3YLR243W AI4P03878 556 aa8.61□□□□□ -1.03
GPN3YLR243W YJL171CP46992 396 aa8.6□□□□□ -1.03
GPN3YLR243W PBS2P08018 668 aa8.59□□□□□ -1.03
GPN3YLR243W NCR1Q12200 1170 aa8.59□□□□□ -1.03
GPN3YLR243W PCS60P38137 543 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
GPN3YLR243W TFG1P41895 735 aaPredicted RBP8.55□□□□□ -1.04
GPN3YLR243W BMT6Q12291 365 aa8.55□□□□□ -1.04
GPN3YLR243W SPB4P25808 606 aaPredicted RBP8.54□□□□□ -1.04
GPN3YLR243W DSF2P38213 736 aa8.54□□□□□ -1.04
GPN3YLR243W RAD54P32863 898 aa8.52□□□□□ -1.05
GPN3YLR243W SLI15P38283 698 aa8.52□□□□□ -1.05
GPN3YLR243W MID1P41821 548 aa8.52□□□□□ -1.05
GPN3YLR243W PML39Q03760 334 aa8.52□□□□□ -1.05
GPN3YLR243W COX6P00427 148 aa8.51□□□□□ -1.05
GPN3YLR243W YDR344CQ05510 147 aa8.48□□□□□ -1.05
GPN3YLR243W YDL129WQ07555 291 aa8.48□□□□□ -1.05
GPN3YLR243W MAK21Q12176 1025 aaKnown RBP8.48□□□□□ -1.05
GPN3YLR243W IES2P40154 320 aa8.47□□□□□ -1.05
GPN3YLR243W MAM3Q12296 706 aa8.47□□□□□ -1.05
GPN3YLR243W LEU3P08638 886 aa8.44□□□□□ -1.06
GPN3YLR243W SAP30P38429 201 aa8.44□□□□□ -1.06
GPN3YLR243W KIC1P38692 1080 aa8.44□□□□□ -1.06
GPN3YLR243W CDC73Q06697 393 aa8.44□□□□□ -1.06
GPN3YLR243W NUP42P49686 430 aaKnown RBP8.43□□□□□ -1.06
GPN3YLR243W ORC6P38826 435 aa8.42□□□□□ -1.06
GPN3YLR243W MPC54Q08550 464 aa8.41□□□□□ -1.06
GPN3YLR243W DIT2P21595 489 aa8.39□□□□□ -1.07
GPN3YLR243W PEX29Q03370 554 aa8.39□□□□□ -1.07
GPN3YLR243W GAP1P19145 602 aaPredicted RBP8.36□□□□□ -1.07
GPN3YLR243W DPL1Q05567 589 aa8.34□□□□□ -1.07
GPN3YLR243W PRE3P38624 215 aa8.31□□□□□ -1.08
GPN3YLR243W NMA111P53920 997 aa8.31□□□□□ -1.08
GPN3YLR243W CHL1P22516 861 aaPredicted RBP8.3□□□□□ -1.08
GPN3YLR243W GLC3P32775 704 aa8.3□□□□□ -1.08
GPN3YLR243W ARH1P48360 493 aa8.3□□□□□ -1.08
GPN3YLR243W RGR1P19263 1082 aa8.28□□□□□ -1.08
GPN3YLR243W PSE1P32337 1089 aaKnown RBP8.28□□□□□ -1.08
GPN3YLR243W MVP1P40959 511 aaKnown RBP8.28□□□□□ -1.08
GPN3YLR243W YNR021WP53723 404 aaKnown RBP8.28□□□□□ -1.08
GPN3YLR243W HAP5Q02516 242 aa8.26□□□□□ -1.09
GPN3YLR243W ELP4Q02884 456 aaKnown RBP8.25□□□□□ -1.09
GPN3YLR243W CSC1Q06538 782 aa8.25□□□□□ -1.09
GPN3YLR243W ISU2Q12056 156 aa8.25□□□□□ -1.09
GPN3YLR243W PDR1P12383 1068 aa8.23□□□□□ -1.09
GPN3YLR243W RPP1BP10622 106 aaKnown RBP8.22□□□□□ -1.09
GPN3YLR243W TFB4Q12004 338 aa8.22□□□□□ -1.09
GPN3YLR243W YRR1Q12172 810 aa8.22□□□□□ -1.09
GPN3YLR243W RPN1P38764 993 aaKnown RBP8.21□□□□□ -1.1
GPN3YLR243W YPR109WQ06104 294 aa8.21□□□□□ -1.1
GPN3YLR243W TUM1Q08686 304 aaKnown RBP8.21□□□□□ -1.1
GPN3YLR243W PEX21P50091 288 aa8.2□□□□□ -1.1
GPN3YLR243W RAM1P22007 431 aa8.18□□□□□ -1.1
GPN3YLR243W BNI4P53858 892 aa8.18□□□□□ -1.1
GPN3YLR243W YPR015CQ12531 247 aa8.18□□□□□ -1.1
GPN3YLR243W SPT23P35210 1082 aa8.17□□□□□ -1.1
GPN3YLR243W BCK2P33306 851 aa8.15□□□□□ -1.1
GPN3YLR243W ATF2P53296 535 aa8.15□□□□□ -1.1
GPN3YLR243W AIM7Q12156 149 aa8.15□□□□□ -1.1
GPN3YLR243W LEO1P38439 464 aa8.14□□□□□ -1.11
GPN3YLR243W KIN1P13185 1064 aa8.13□□□□□ -1.11
GPN3YLR243W TEA1P47988 759 aa8.13□□□□□ -1.11
GPN3YLR243W STR2P47164 639 aa8.12□□□□□ -1.11
GPN3YLR243W NUD1P32336 851 aa8.11□□□□□ -1.11
GPN3YLR243W PTC2P39966 464 aaKnown RBP8.11□□□□□ -1.11
GPN3YLR243W NIS1P53939 407 aa8.11□□□□□ -1.11
GPN3YLR243W CLB5P30283 435 aa8.09□□□□□ -1.11
GPN3YLR243W ISM1P48526 1002 aa8.09□□□□□ -1.11
GPN3YLR243W YML082WQ04533 649 aaKnown RBP8.08□□□□□ -1.12
GPN3YLR243W VRP1P37370 817 aa8.07□□□□□ -1.12
GPN3YLR243W ERF2Q06551 359 aa8.07□□□□□ -1.12
GPN3YLR243W TY1A-DR4O74302 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-HP0C2I4 478 aaKnown RBP8.05□□□□□ -1.12
GPN3YLR243W TY1A-AP0CX57 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-PR1P0CX58 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-ORP0CX59 440 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms