RNA–Protein interactions for RNA: YLR120C

YPS1, Transcript of Aspartic protease, yeastyeast

Gene YPS1, Length 1,710 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPS1YLR120C TY1B-BLQ12490 1755 aa18.6■□□□□ 0.57
YPS1YLR120C ULS1Q08562 1619 aa18.58■□□□□ 0.57
YPS1YLR120C IKI3Q06706 1349 aaKnown RBP18.56■□□□□ 0.56
YPS1YLR120C IFH1P39520 1085 aa18.53■□□□□ 0.56
YPS1YLR120C GEA1P47102 1408 aaPredicted RBP18.51■□□□□ 0.55
YPS1YLR120C MET5P47169 1442 aa18.45■□□□□ 0.54
YPS1YLR120C NTE1Q04958 1679 aa18.44■□□□□ 0.54
YPS1YLR120C SNT2P53127 1403 aa18.44■□□□□ 0.54
YPS1YLR120C NUP170P38181 1502 aa18.4■□□□□ 0.54
YPS1YLR120C RPO21P04050 1733 aaKnown RBP18.39■□□□□ 0.54
YPS1YLR120C NUP159P40477 1460 aa18.36■□□□□ 0.53
YPS1YLR120C TY3B-GQ99315 1547 aa18.31■□□□□ 0.52
YPS1YLR120C YRF1-1P0CX20 1796 aa18.31■□□□□ 0.52
YPS1YLR120C YRF1-5P0CX21 1796 aa18.31■□□□□ 0.52
YPS1YLR120C YRF1-8P0CX22 1796 aa18.31■□□□□ 0.52
YPS1YLR120C SSM4P40318 1319 aa18.29■□□□□ 0.52
YPS1YLR120C GEA2P39993 1459 aaKnown RBP18.26■□□□□ 0.51
YPS1YLR120C RTT106P40161 455 aa18.26■□□□□ 0.51
YPS1YLR120C YBT1P32386 1661 aa18.22■□□□□ 0.51
YPS1YLR120C IRC20Q06554 1556 aa18.21■□□□□ 0.51
YPS1YLR120C VPS15P22219 1454 aa18.15■□□□□ 0.5
YPS1YLR120C CAT8P39113 1433 aa18.12■□□□□ 0.49
YPS1YLR120C LTE1P07866 1435 aa18.07■□□□□ 0.48
YPS1YLR120C SPO14P36126 1683 aa18.05■□□□□ 0.48
YPS1YLR120C PDR12Q02785 1511 aa18.04■□□□□ 0.48
YPS1YLR120C MET10P39692 1035 aa18.03■□□□□ 0.48
YPS1YLR120C GDB1Q06625 1536 aa17.98■□□□□ 0.47
YPS1YLR120C PDR10P51533 1564 aa17.97■□□□□ 0.47
YPS1YLR120C ARO1P08566 1588 aaKnown RBP17.94■□□□□ 0.46
YPS1YLR120C SRB8P25648 1427 aa17.92■□□□□ 0.46
YPS1YLR120C NUP157P40064 1391 aaKnown RBP17.89■□□□□ 0.45
YPS1YLR120C CKB1P43639 278 aa17.87■□□□□ 0.45
YPS1YLR120C BNI1P41832 1953 aa17.86■□□□□ 0.45
YPS1YLR120C BUD3P25558 1636 aa17.78■□□□□ 0.44
YPS1YLR120C IQG1Q12280 1495 aa17.77■□□□□ 0.43
YPS1YLR120C DRS2P39524 1355 aa17.76■□□□□ 0.43
YPS1YLR120C ITT1Q04638 464 aa17.76■□□□□ 0.43
YPS1YLR120C GCN2P15442 1659 aa17.72■□□□□ 0.43
YPS1YLR120C YSP2Q06681 1438 aa17.7■□□□□ 0.42
YPS1YLR120C BUD21Q08492 214 aaPredicted RBP17.68■□□□□ 0.42
YPS1YLR120C MMS1Q06211 1407 aa17.67■□□□□ 0.42
YPS1YLR120C DOP1Q03921 1698 aa17.61■□□□□ 0.41
YPS1YLR120C TRM3Q07527 1436 aa17.56■□□□□ 0.4
YPS1YLR120C SEC7P11075 2009 aaKnown RBP17.54■□□□□ 0.4
YPS1YLR120C POL5P39985 1022 aaKnown RBP17.53■□□□□ 0.4
YPS1YLR120C BNR1P40450 1375 aa17.52■□□□□ 0.39
YPS1YLR120C CHC1P22137 1653 aaKnown RBP17.49■□□□□ 0.39
YPS1YLR120C NOP7P53261 605 aaKnown RBP17.47■□□□□ 0.39
YPS1YLR120C YOR093CQ12275 1648 aa17.44■□□□□ 0.38
YPS1YLR120C DNF2Q12675 1612 aa17.39■□□□□ 0.37
YPS1YLR120C PDR5P33302 1511 aaKnown RBP17.38■□□□□ 0.37
YPS1YLR120C PAF1P38351 445 aa17.38■□□□□ 0.37
YPS1YLR120C BFR2Q06631 534 aaKnown RBP17.3■□□□□ 0.36
YPS1YLR120C VMR1P38735 1592 aa17.26■□□□□ 0.35
YPS1YLR120C NSR1P27476 414 aaKnown RBP RIP-Chip data17.23■□□□□ 0.35not detected
YPS1YLR120C NUP188P52593 1655 aaKnown RBP17.22■□□□□ 0.35
YPS1YLR120C RAV1P47104 1357 aa17.2■□□□□ 0.34
YPS1YLR120C PDR11P40550 1411 aa17.19■□□□□ 0.34
YPS1YLR120C IML1P47170 1584 aa17.17■□□□□ 0.34
YPS1YLR120C SEC3P33332 1336 aaKnown RBP17.16■□□□□ 0.34
YPS1YLR120C RTC1Q08281 1341 aa17.14■□□□□ 0.33
YPS1YLR120C ABP1P15891 592 aaKnown RBP17.14■□□□□ 0.33
YPS1YLR120C ORC1P54784 914 aaPredicted RBP17.11■□□□□ 0.33
YPS1YLR120C SPT7P35177 1332 aa17.11■□□□□ 0.33
YPS1YLR120C ENP1P38333 483 aaKnown RBP17.08■□□□□ 0.32
YPS1YLR120C TY3B-IQ7LHG5 1498 aaKnown RBP17.07■□□□□ 0.32
YPS1YLR120C MHP1P43638 1398 aa17.06■□□□□ 0.32
YPS1YLR120C TAF5P38129 798 aa17.03■□□□□ 0.32
YPS1YLR120C YAP3P38749 330 aa17.01■□□□□ 0.31
YPS1YLR120C NUP192P47054 1683 aa16.99■□□□□ 0.31
YPS1YLR120C DNF3Q12674 1656 aa16.98■□□□□ 0.31
YPS1YLR120C ESL2P36168 1195 aa16.98■□□□□ 0.31
YPS1YLR120C URN1Q06525 465 aaKnown RBP16.96■□□□□ 0.31
YPS1YLR120C TYS1P36421 394 aaKnown RBP16.95■□□□□ 0.3
YPS1YLR120C IPL1P38991 367 aa16.95■□□□□ 0.3
YPS1YLR120C KIP3P53086 805 aaKnown RBP16.92■□□□□ 0.3
YPS1YLR120C YLR419WQ06698 1435 aaKnown RBP16.92■□□□□ 0.3
YPS1YLR120C PSD2P53037 1138 aaKnown RBP16.87■□□□□ 0.29
YPS1YLR120C LEU3P08638 886 aa16.87■□□□□ 0.29
YPS1YLR120C PDS5Q04264 1277 aa16.83■□□□□ 0.28
YPS1YLR120C MIF2P35201 549 aa16.82■□□□□ 0.28
YPS1YLR120C HAP1P0CE41 1502 aa16.81■□□□□ 0.28
YPS1YLR120C SPE2P21182 396 aa16.77■□□□□ 0.28
YPS1YLR120C SCT1P32784 759 aa16.77■□□□□ 0.28
YPS1YLR120C RAD9P14737 1309 aa16.74■□□□□ 0.27
YPS1YLR120C NOP2P40991 618 aaKnown RBP16.74■□□□□ 0.27
YPS1YLR120C ALD4P46367 519 aaKnown RBP16.74■□□□□ 0.27
YPS1YLR120C BCK1Q01389 1478 aa16.74■□□□□ 0.27
YPS1YLR120C MAK10Q02197 733 aa16.72■□□□□ 0.27
YPS1YLR120C TAF8Q03750 510 aa16.72■□□□□ 0.27
YPS1YLR120C CAB1Q04430 367 aa16.66■□□□□ 0.26
YPS1YLR120C PRS1P32895 427 aaKnown RBP16.65■□□□□ 0.26
YPS1YLR120C MLP1Q02455 1875 aaKnown RBP16.65■□□□□ 0.26
YPS1YLR120C NST1P53935 1240 aa16.64■□□□□ 0.25
YPS1YLR120C NAP1P25293 417 aaKnown RBP16.62■□□□□ 0.25
YPS1YLR120C CHZ1P40019 153 aaPredicted RBP16.6■□□□□ 0.25
YPS1YLR120C USO1P25386 1790 aa16.58■□□□□ 0.24
YPS1YLR120C RTG3P38165 486 aa16.57■□□□□ 0.24
YPS1YLR120C MRX12P47084 519 aa16.55■□□□□ 0.24
YPS1YLR120C KRE5P22023 1365 aa16.55■□□□□ 0.24
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms