RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C PTC4P38089 393 aa10.56□□□□□ -0.72
TVP38YKR088C YEL023CP39992 682 aa10.55□□□□□ -0.72
TVP38YKR088C CHL1P22516 861 aaPredicted RBP10.54□□□□□ -0.72
TVP38YKR088C BCK2P33306 851 aa10.53□□□□□ -0.72
TVP38YKR088C PRE3P38624 215 aa10.49□□□□□ -0.73
TVP38YKR088C GRE2Q12068 342 aaKnown RBP10.45□□□□□ -0.74
TVP38YKR088C MIF2P35201 549 aa10.39□□□□□ -0.75
TVP38YKR088C MAK11P20484 414 aaKnown RBP10.36□□□□□ -0.75
TVP38YKR088C ATH1P48016 1211 aa10.36□□□□□ -0.75
TVP38YKR088C PML39Q03760 334 aa10.36□□□□□ -0.75
TVP38YKR088C GUT1P32190 709 aa10.32□□□□□ -0.76
TVP38YKR088C ELP4Q02884 456 aaKnown RBP10.31□□□□□ -0.76
TVP38YKR088C PTC3P34221 468 aaKnown RBP10.3□□□□□ -0.76
TVP38YKR088C RAM2P29703 316 aa10.29□□□□□ -0.76
TVP38YKR088C VRP1P37370 817 aa10.28□□□□□ -0.76
TVP38YKR088C EDS1P38073 919 aa10.27□□□□□ -0.77
TVP38YKR088C XDJ1P39102 459 aa10.26□□□□□ -0.77
TVP38YKR088C YDR344CQ05510 147 aa10.24□□□□□ -0.77
TVP38YKR088C COQ8P27697 501 aa10.2□□□□□ -0.78
TVP38YKR088C ARH1P48360 493 aa10.19□□□□□ -0.78
TVP38YKR088C MID1P41821 548 aa10.18□□□□□ -0.78
TVP38YKR088C NST1P53935 1240 aa10.17□□□□□ -0.78
TVP38YKR088C PEX29Q03370 554 aa10.15□□□□□ -0.78
TVP38YKR088C MPH3P0CE00 602 aa10.13□□□□□ -0.79
TVP38YKR088C SOL3P38858 249 aa10.13□□□□□ -0.79
TVP38YKR088C AI4P03878 556 aa10.12□□□□□ -0.79
TVP38YKR088C SPT23P35210 1082 aa10.1□□□□□ -0.79
TVP38YKR088C DPS1P04802 557 aaKnown RBP10.07□□□□□ -0.8
TVP38YKR088C HAP5Q02516 242 aa10.04□□□□□ -0.8
TVP38YKR088C NOP53Q12080 455 aaKnown RBP10.04□□□□□ -0.8
TVP38YKR088C ILV3P39522 585 aaKnown RBP10.01□□□□□ -0.81
TVP38YKR088C YGR273CP53329 174 aa10□□□□□ -0.81
TVP38YKR088C BNI4P53858 892 aa9.99□□□□□ -0.81
TVP38YKR088C PTC2P39966 464 aaKnown RBP9.96□□□□□ -0.82
TVP38YKR088C MPC54Q08550 464 aa9.95□□□□□ -0.82
TVP38YKR088C YML082WQ04533 649 aaKnown RBP9.93□□□□□ -0.82
TVP38YKR088C NMA111P53920 997 aa9.9□□□□□ -0.82
TVP38YKR088C SLI15P38283 698 aa9.87□□□□□ -0.83
TVP38YKR088C DPL1Q05567 589 aa9.86□□□□□ -0.83
TVP38YKR088C KEX1P09620 729 aa9.76□□□□□ -0.85
TVP38YKR088C SRC1Q03707 834 aa9.76□□□□□ -0.85
TVP38YKR088C ISU2Q12056 156 aa9.75□□□□□ -0.85
TVP38YKR088C YPR015CQ12531 247 aa9.69□□□□□ -0.86
TVP38YKR088C SET1P38827 1080 aaKnown RBP9.68□□□□□ -0.86
TVP38YKR088C CDC73Q06697 393 aa9.67□□□□□ -0.86
TVP38YKR088C RAM1P22007 431 aa9.66□□□□□ -0.86
TVP38YKR088C GYP1Q08484 637 aa9.66□□□□□ -0.86
TVP38YKR088C RAS1P01119 309 aa9.65□□□□□ -0.86
TVP38YKR088C YLR326WQ06170 240 aaKnown RBP9.63□□□□□ -0.87
TVP38YKR088C UBP14P38237 781 aaKnown RBP9.62□□□□□ -0.87
TVP38YKR088C VHR2P40041 505 aa9.62□□□□□ -0.87
TVP38YKR088C RPP1BP10622 106 aaKnown RBP9.61□□□□□ -0.87
TVP38YKR088C RAD54P32863 898 aa9.58□□□□□ -0.88
TVP38YKR088C AMS1P22855 1083 aa9.57□□□□□ -0.88
TVP38YKR088C PCS60P38137 543 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
TVP38YKR088C SAS4Q04003 481 aa9.57□□□□□ -0.88
TVP38YKR088C PDR1P12383 1068 aa9.56□□□□□ -0.88
TVP38YKR088C TRK1P12685 1235 aa9.5□□□□□ -0.89
TVP38YKR088C YEL077CQ3E7X8 1277 aa9.47□□□□□ -0.89
TVP38YKR088C KIC1P38692 1080 aa9.46□□□□□ -0.9
TVP38YKR088C RGA1P39083 1007 aa9.46□□□□□ -0.9
TVP38YKR088C IFH1P39520 1085 aa9.45□□□□□ -0.9
TVP38YKR088C SDH2P21801 266 aa9.44□□□□□ -0.9
TVP38YKR088C MRF1P30775 413 aaPredicted RBP9.44□□□□□ -0.9
TVP38YKR088C PEX21P50091 288 aa9.44□□□□□ -0.9
TVP38YKR088C RGA2Q06407 1009 aa9.44□□□□□ -0.9
TVP38YKR088C YDR090CQ03193 310 aa9.41□□□□□ -0.9
TVP38YKR088C YRR1Q12172 810 aa9.4□□□□□ -0.9
TVP38YKR088C PRT1P06103 763 aaKnown RBP9.38□□□□□ -0.91
TVP38YKR088C BUD20Q08004 166 aaPredicted RBP9.38□□□□□ -0.91
TVP38YKR088C CSC1Q06538 782 aa9.36□□□□□ -0.91
TVP38YKR088C TFB4Q12004 338 aa9.35□□□□□ -0.91
TVP38YKR088C ERG12P07277 443 aa9.32□□□□□ -0.92
TVP38YKR088C GAP1P19145 602 aaPredicted RBP9.32□□□□□ -0.92
TVP38YKR088C REF2P42073 533 aaPredicted RBP9.32□□□□□ -0.92
TVP38YKR088C STR2P47164 639 aa9.32□□□□□ -0.92
TVP38YKR088C TUM1Q08686 304 aaKnown RBP9.32□□□□□ -0.92
TVP38YKR088C NUD1P32336 851 aa9.3□□□□□ -0.92
TVP38YKR088C NPL4P33755 580 aa9.3□□□□□ -0.92
TVP38YKR088C ISM1P48526 1002 aa9.3□□□□□ -0.92
TVP38YKR088C YPR148CQ06523 435 aa9.26□□□□□ -0.93
TVP38YKR088C GCD11P32481 527 aaKnown RBP9.22□□□□□ -0.93
TVP38YKR088C ORC6P38826 435 aa9.22□□□□□ -0.93
TVP38YKR088C SPT16P32558 1035 aaKnown RBP9.21□□□□□ -0.94
TVP38YKR088C MAK21Q12176 1025 aaKnown RBP9.19□□□□□ -0.94
TVP38YKR088C CST6P40535 587 aa9.18□□□□□ -0.94
TVP38YKR088C BRE2P43132 505 aa9.18□□□□□ -0.94
TVP38YKR088C GCR2Q01722 534 aa9.18□□□□□ -0.94
TVP38YKR088C COX6P00427 148 aa9.17□□□□□ -0.94
TVP38YKR088C AIR1P40507 360 aaKnown RBP9.16□□□□□ -0.94
TVP38YKR088C VPS70P47161 811 aa9.16□□□□□ -0.94
TVP38YKR088C TY1A-DR4O74302 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-HP0C2I4 478 aaKnown RBP9.15□□□□□ -0.94
TVP38YKR088C TY1A-AP0CX57 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-PR1P0CX58 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-ORP0CX59 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-PR2P0CX60 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-DR5P0CX65 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-ER2P0CX66 440 aa9.15□□□□□ -0.94
TVP38YKR088C TY1A-GR3P0CX67 440 aa9.15□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms