RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	RTG1	P32607	177 aa		14.14	□□□□□ -0.15
PAM17	YKR065C	JIP4	Q03361	876 aa		14.14	□□□□□ -0.15
PAM17	YKR065C	SEC61	P32915	480 aa		14.11	□□□□□ -0.15
PAM17	YKR065C	SET1	P38827	1080 aa	Known RBP	14.11	□□□□□ -0.15
PAM17	YKR065C	YEL023C	P39992	682 aa		14.07	□□□□□ -0.16
PAM17	YKR065C	YJL171C	P46992	396 aa		14.06	□□□□□ -0.16
PAM17	YKR065C	PTC4	P38089	393 aa		14.05	□□□□□ -0.16
PAM17	YKR065C	NCR1	Q12200	1170 aa		14.05	□□□□□ -0.16
PAM17	YKR065C	DAN4	P47179	1161 aa		14.04	□□□□□ -0.16
PAM17	YKR065C	TFG1	P41895	735 aa	Predicted RBP	13.98	□□□□□ -0.17
PAM17	YKR065C	BMT6	Q12291	365 aa		13.95	□□□□□ -0.18
PAM17	YKR065C	IFH1	P39520	1085 aa		13.93	□□□□□ -0.18
PAM17	YKR065C	NST1	P53935	1240 aa		13.92	□□□□□ -0.18
PAM17	YKR065C	SOL3	P38858	249 aa		13.91	□□□□□ -0.18
PAM17	YKR065C	DMA1	P38823	416 aa		13.87	□□□□□ -0.19
PAM17	YKR065C	YGR273C	P53329	174 aa		13.86	□□□□□ -0.19
PAM17	YKR065C	AI4	P03878	556 aa		13.85	□□□□□ -0.19
PAM17	YKR065C	YDL129W	Q07555	291 aa		13.85	□□□□□ -0.19
PAM17	YKR065C	MPH3	P0CE00	602 aa		13.83	□□□□□ -0.2
PAM17	YKR065C	YPR148C	Q06523	435 aa		13.8	□□□□□ -0.2
PAM17	YKR065C	SAP30	P38429	201 aa		13.76	□□□□□ -0.21
PAM17	YKR065C	PML39	Q03760	334 aa		13.75	□□□□□ -0.21
PAM17	YKR065C	ILV3	P39522	585 aa	Known RBP	13.71	□□□□□ -0.21
PAM17	YKR065C	RQC2	Q12532	1038 aa	Known RBP	13.71	□□□□□ -0.21
PAM17	YKR065C	KEX1	P09620	729 aa		13.64	□□□□□ -0.23
PAM17	YKR065C	VPS70	P47161	811 aa		13.62	□□□□□ -0.23
PAM17	YKR065C	UBP14	P38237	781 aa	Known RBP	13.61	□□□□□ -0.23
PAM17	YKR065C	MID1	P41821	548 aa		13.6	□□□□□ -0.23
PAM17	YKR065C	YLR326W	Q06170	240 aa	Known RBP	13.6	□□□□□ -0.23
PAM17	YKR065C	VHR2	P40041	505 aa		13.59	□□□□□ -0.23
PAM17	YKR065C	REF2	P42073	533 aa	Predicted RBP	13.57	□□□□□ -0.24
PAM17	YKR065C	CHL1	P22516	861 aa	Predicted RBP	13.56	□□□□□ -0.24
PAM17	YKR065C	SLI15	P38283	698 aa		13.56	□□□□□ -0.24
PAM17	YKR065C	PRE3	P38624	215 aa		13.56	□□□□□ -0.24
PAM17	YKR065C	PEX29	Q03370	554 aa		13.55	□□□□□ -0.24
PAM17	YKR065C	SAS10	Q12136	610 aa	Predicted RBP	13.55	□□□□□ -0.24
PAM17	YKR065C	ARH1	P48360	493 aa		13.51	□□□□□ -0.25
PAM17	YKR065C	RAD54	P32863	898 aa		13.5	□□□□□ -0.25
PAM17	YKR065C	CKB1	P43639	278 aa		13.5	□□□□□ -0.25
PAM17	YKR065C	ELP4	Q02884	456 aa	Known RBP	13.48	□□□□□ -0.25
PAM17	YKR065C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	13.47	□□□□□ -0.25	not detected
PAM17	YKR065C	MPC54	Q08550	464 aa		13.47	□□□□□ -0.25
PAM17	YKR065C	YDR090C	Q03193	310 aa		13.46	□□□□□ -0.25
PAM17	YKR065C	YDR344C	Q05510	147 aa		13.44	□□□□□ -0.26
PAM17	YKR065C	MAK21	Q12176	1025 aa	Known RBP	13.44	□□□□□ -0.26
PAM17	YKR065C	KIC1	P38692	1080 aa		13.43	□□□□□ -0.26
PAM17	YKR065C	DPL1	Q05567	589 aa		13.43	□□□□□ -0.26
PAM17	YKR065C	HAP5	Q02516	242 aa		13.41	□□□□□ -0.26
PAM17	YKR065C	RPP1B	P10622	106 aa	Known RBP	13.38	□□□□□ -0.27
PAM17	YKR065C	COX6	P00427	148 aa		13.36	□□□□□ -0.27
PAM17	YKR065C	NMA111	P53920	997 aa		13.36	□□□□□ -0.27
PAM17	YKR065C	SPT23	P35210	1082 aa		13.35	□□□□□ -0.27
PAM17	YKR065C	BNI4	P53858	892 aa		13.33	□□□□□ -0.28
PAM17	YKR065C	CDC73	Q06697	393 aa		13.33	□□□□□ -0.28
PAM17	YKR065C	PBS2	P08018	668 aa		13.31	□□□□□ -0.28
PAM17	YKR065C	BCK2	P33306	851 aa		13.31	□□□□□ -0.28
PAM17	YKR065C	INO80	P53115	1489 aa		13.3	□□□□□ -0.28
PAM17	YKR065C	ISU2	Q12056	156 aa		13.3	□□□□□ -0.28
PAM17	YKR065C	SGS1	P35187	1447 aa		13.27	□□□□□ -0.29
PAM17	YKR065C	MON2	P48563	1636 aa	Predicted RBP	13.25	□□□□□ -0.29
PAM17	YKR065C	PTC2	P39966	464 aa	Known RBP	13.22	□□□□□ -0.29
PAM17	YKR065C	DSF2	P38213	736 aa		13.2	□□□□□ -0.3
PAM17	YKR065C	GAP1	P19145	602 aa	Predicted RBP	13.19	□□□□□ -0.3
PAM17	YKR065C	VRP1	P37370	817 aa		13.19	□□□□□ -0.3
PAM17	YKR065C	ORC6	P38826	435 aa		13.19	□□□□□ -0.3
PAM17	YKR065C	YML082W	Q04533	649 aa	Known RBP	13.19	□□□□□ -0.3
PAM17	YKR065C	CSC1	Q06538	782 aa		13.19	□□□□□ -0.3
PAM17	YKR065C	MAM3	Q12296	706 aa		13.16	□□□□□ -0.3
PAM17	YKR065C	TCB3	Q03640	1545 aa	Known RBP	13.16	□□□□□ -0.3
PAM17	YKR065C	TFB4	Q12004	338 aa		13.15	□□□□□ -0.3
PAM17	YKR065C	SPB4	P25808	606 aa	Predicted RBP	13.14	□□□□□ -0.31
PAM17	YKR065C	PEX21	P50091	288 aa		13.14	□□□□□ -0.31
PAM17	YKR065C	XDJ1	P39102	459 aa		13.09	□□□□□ -0.31
PAM17	YKR065C	RAM1	P22007	431 aa		13.06	□□□□□ -0.32
PAM17	YKR065C	IES2	P40154	320 aa		13.04	□□□□□ -0.32
PAM17	YKR065C	MVP1	P40959	511 aa	Known RBP	13.04	□□□□□ -0.32
PAM17	YKR065C	PDR1	P12383	1068 aa		13.03	□□□□□ -0.32
PAM17	YKR065C	YRR1	Q12172	810 aa		13.03	□□□□□ -0.32
PAM17	YKR065C	PSE1	P32337	1089 aa	Known RBP	13.02	□□□□□ -0.33
PAM17	YKR065C	TUM1	Q08686	304 aa	Known RBP	13.02	□□□□□ -0.33
PAM17	YKR065C	YPR015C	Q12531	247 aa		13.01	□□□□□ -0.33
PAM17	YKR065C	RGR1	P19263	1082 aa		13	□□□□□ -0.33
PAM17	YKR065C	NUP42	P49686	430 aa	Known RBP	12.96	□□□□□ -0.33
PAM17	YKR065C	YPR109W	Q06104	294 aa		12.93	□□□□□ -0.34
PAM17	YKR065C	TY1B-DR4	Q07793	1604 aa		12.9	□□□□□ -0.34
PAM17	YKR065C	CLB5	P30283	435 aa		12.89	□□□□□ -0.35
PAM17	YKR065C	NUD1	P32336	851 aa		12.89	□□□□□ -0.35
PAM17	YKR065C	DIT2	P21595	489 aa		12.86	□□□□□ -0.35
PAM17	YKR065C	SAS4	Q04003	481 aa		12.86	□□□□□ -0.35
PAM17	YKR065C	GYP1	Q08484	637 aa		12.86	□□□□□ -0.35
PAM17	YKR065C	NPL4	P33755	580 aa		12.85	□□□□□ -0.35
PAM17	YKR065C	STR2	P47164	639 aa		12.84	□□□□□ -0.35
PAM17	YKR065C	BUD20	Q08004	166 aa	Predicted RBP	12.83	□□□□□ -0.36
PAM17	YKR065C	ISM1	P48526	1002 aa		12.82	□□□□□ -0.36
PAM17	YKR065C	SWR1	Q05471	1514 aa		12.81	□□□□□ -0.36
PAM17	YKR065C	PRT1	P06103	763 aa	Known RBP	12.79	□□□□□ -0.36
PAM17	YKR065C	TEA1	P47988	759 aa		12.76	□□□□□ -0.37
PAM17	YKR065C	YNR021W	P53723	404 aa	Known RBP	12.76	□□□□□ -0.37
PAM17	YKR065C	DPS1	P04802	557 aa	Known RBP	12.75	□□□□□ -0.37
PAM17	YKR065C	GCD11	P32481	527 aa	Known RBP	12.71	□□□□□ -0.37

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms