RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeastyeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH1YKL148C TY1B-MR2Q04670 1755 aaKnown RBP16.91■□□□□ 0.3
SDH1YKL148C TY1B-LR1Q12088 1755 aaKnown RBP16.91■□□□□ 0.3
SDH1YKL148C TY1B-NL1Q12112 1755 aa16.91■□□□□ 0.3
SDH1YKL148C TY1B-GR1Q12141 1755 aa16.91■□□□□ 0.3
SDH1YKL148C TY1B-BLQ12490 1755 aa16.91■□□□□ 0.3
SDH1YKL148C ESC1Q03661 1658 aaKnown RBP16.85■□□□□ 0.29
SDH1YKL148C YBT1P32386 1661 aa16.82■□□□□ 0.28
SDH1YKL148C VPS15P22219 1454 aa16.82■□□□□ 0.28
SDH1YKL148C NSR1P27476 414 aaKnown RBP RIP-Chip data16.78■□□□□ 0.28not detected
SDH1YKL148C GEA2P39993 1459 aaKnown RBP16.75■□□□□ 0.27
SDH1YKL148C RTT106P40161 455 aa16.74■□□□□ 0.27
SDH1YKL148C IRC20Q06554 1556 aa16.74■□□□□ 0.27
SDH1YKL148C NTE1Q04958 1679 aa16.72■□□□□ 0.27
SDH1YKL148C CAT8P39113 1433 aa16.71■□□□□ 0.27
SDH1YKL148C POL5P39985 1022 aaKnown RBP16.68■□□□□ 0.26
SDH1YKL148C RPO21P04050 1733 aaKnown RBP16.68■□□□□ 0.26
SDH1YKL148C RPA190P10964 1664 aaKnown RBP16.68■□□□□ 0.26
SDH1YKL148C DNF1P32660 1571 aa16.66■□□□□ 0.26
SDH1YKL148C SRB8P25648 1427 aa16.58■□□□□ 0.24
SDH1YKL148C GDB1Q06625 1536 aa16.56■□□□□ 0.24
SDH1YKL148C NOP2P40991 618 aaKnown RBP16.54■□□□□ 0.24
SDH1YKL148C ARO1P08566 1588 aaKnown RBP16.54■□□□□ 0.24
SDH1YKL148C NUP159P40477 1460 aa16.51■□□□□ 0.23
SDH1YKL148C PDR10P51533 1564 aa16.49■□□□□ 0.23
SDH1YKL148C GCN2P15442 1659 aa16.49■□□□□ 0.23
SDH1YKL148C CKB1P43639 278 aa16.47■□□□□ 0.23
SDH1YKL148C ENP1P38333 483 aaKnown RBP16.46■□□□□ 0.23
SDH1YKL148C PDR12Q02785 1511 aa16.42■□□□□ 0.22
SDH1YKL148C SPO14P36126 1683 aa16.4■□□□□ 0.22
SDH1YKL148C MET10P39692 1035 aa16.39■□□□□ 0.21
SDH1YKL148C SEC3P33332 1336 aaKnown RBP16.39■□□□□ 0.21
SDH1YKL148C NUP157P40064 1391 aaKnown RBP16.37■□□□□ 0.21
SDH1YKL148C SPT7P35177 1332 aa16.36■□□□□ 0.21
SDH1YKL148C MTC1P47018 478 aaKnown RBP16.36■□□□□ 0.21
SDH1YKL148C BUD21Q08492 214 aaPredicted RBP16.35■□□□□ 0.21
SDH1YKL148C BUD3P25558 1636 aa16.34■□□□□ 0.21
SDH1YKL148C YRF1-1P0CX20 1796 aa16.32■□□□□ 0.2
SDH1YKL148C YRF1-5P0CX21 1796 aa16.32■□□□□ 0.2
SDH1YKL148C YRF1-8P0CX22 1796 aa16.32■□□□□ 0.2
SDH1YKL148C NOP7P53261 605 aaKnown RBP16.32■□□□□ 0.2
SDH1YKL148C MMS1Q06211 1407 aa16.3■□□□□ 0.2
SDH1YKL148C YSP2Q06681 1438 aa16.27■□□□□ 0.2
SDH1YKL148C IQG1Q12280 1495 aa16.24■□□□□ 0.19
SDH1YKL148C PDR5P33302 1511 aaKnown RBP16.24■□□□□ 0.19
SDH1YKL148C PAF1P38351 445 aa16.16■□□□□ 0.18
SDH1YKL148C MET5P47169 1442 aa16.15■□□□□ 0.18
SDH1YKL148C YOR093CQ12275 1648 aa16.14■□□□□ 0.17
SDH1YKL148C MHP1P43638 1398 aa16.11■□□□□ 0.17
SDH1YKL148C BFR2Q06631 534 aaKnown RBP16.1■□□□□ 0.17
SDH1YKL148C BNR1P40450 1375 aa16.07■□□□□ 0.16
SDH1YKL148C ORC1P54784 914 aaPredicted RBP16.06■□□□□ 0.16
SDH1YKL148C LTE1P07866 1435 aa16.06■□□□□ 0.16
SDH1YKL148C SEC7P11075 2009 aaKnown RBP16.05■□□□□ 0.16
SDH1YKL148C CHC1P22137 1653 aaKnown RBP16.04■□□□□ 0.16
SDH1YKL148C LEU3P08638 886 aa16.04■□□□□ 0.16
SDH1YKL148C PSD2P53037 1138 aaKnown RBP16.02■□□□□ 0.16
SDH1YKL148C PRS1P32895 427 aaKnown RBP16.01■□□□□ 0.15
SDH1YKL148C TY3B-IQ7LHG5 1498 aaKnown RBP15.99■□□□□ 0.15
SDH1YKL148C RAV1P47104 1357 aa15.95■□□□□ 0.14
SDH1YKL148C YLR419WQ06698 1435 aaKnown RBP15.95■□□□□ 0.14
SDH1YKL148C RTC1Q08281 1341 aa15.92■□□□□ 0.14
SDH1YKL148C PDR11P40550 1411 aa15.9■□□□□ 0.14
SDH1YKL148C VMR1P38735 1592 aa15.88■□□□□ 0.13
SDH1YKL148C TAF5P38129 798 aa15.86■□□□□ 0.13
SDH1YKL148C PDS5Q04264 1277 aa15.86■□□□□ 0.13
SDH1YKL148C DRS2P39524 1355 aa15.82■□□□□ 0.12
SDH1YKL148C NUP188P52593 1655 aaKnown RBP15.81■□□□□ 0.12
SDH1YKL148C IML1P47170 1584 aa15.81■□□□□ 0.12
SDH1YKL148C DOP1Q03921 1698 aa15.8■□□□□ 0.12
SDH1YKL148C ESL2P36168 1195 aa15.8■□□□□ 0.12
SDH1YKL148C KIP3P53086 805 aaKnown RBP15.79■□□□□ 0.12
SDH1YKL148C TRM3Q07527 1436 aa15.76■□□□□ 0.11
SDH1YKL148C NUP192P47054 1683 aa15.75■□□□□ 0.11
SDH1YKL148C NST1P53935 1240 aa15.71■□□□□ 0.11
SDH1YKL148C SCT1P32784 759 aa15.67■□□□□ 0.1
SDH1YKL148C SPE2P21182 396 aa15.62■□□□□ 0.09
SDH1YKL148C DNF2Q12675 1612 aa15.62■□□□□ 0.09
SDH1YKL148C CFT1Q06632 1357 aaKnown RBP15.56■□□□□ 0.08
SDH1YKL148C MLP1Q02455 1875 aaKnown RBP15.56■□□□□ 0.08
SDH1YKL148C TFA1P36100 482 aa15.56■□□□□ 0.08
SDH1YKL148C TYS1P36421 394 aaKnown RBP15.53■□□□□ 0.08
SDH1YKL148C RTG3P38165 486 aa15.51■□□□□ 0.07
SDH1YKL148C YAP3P38749 330 aa15.51■□□□□ 0.07
SDH1YKL148C IPL1P38991 367 aa15.51■□□□□ 0.07
SDH1YKL148C TAF8Q03750 510 aa15.5■□□□□ 0.07
SDH1YKL148C RPP0P05317 312 aaKnown RBP15.49■□□□□ 0.07
SDH1YKL148C FUN12P39730 1002 aaKnown RBP15.48■□□□□ 0.07
SDH1YKL148C CDC45Q08032 650 aa15.48■□□□□ 0.07
SDH1YKL148C VPS27P40343 622 aaKnown RBP15.47■□□□□ 0.07
SDH1YKL148C URN1Q06525 465 aaKnown RBP15.47■□□□□ 0.07
SDH1YKL148C BCK1Q01389 1478 aa15.47■□□□□ 0.07
SDH1YKL148C RAD9P14737 1309 aa15.46■□□□□ 0.07
SDH1YKL148C CHZ1P40019 153 aaPredicted RBP15.46■□□□□ 0.07
SDH1YKL148C ALD4P46367 519 aaKnown RBP15.46■□□□□ 0.07
SDH1YKL148C FKH1P40466 484 aa15.43■□□□□ 0.06
SDH1YKL148C RVB2Q12464 471 aaKnown RBP15.41■□□□□ 0.06
SDH1YKL148C IOC4Q04213 475 aa15.38■□□□□ 0.05
SDH1YKL148C YDL144CQ07589 356 aa15.38■□□□□ 0.05
SDH1YKL148C TRK1P12685 1235 aa15.37■□□□□ 0.05
SDH1YKL148C NAP1P25293 417 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms