RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeastyeast

Gene RPL39, Length 156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL39YJL189W JIP4Q03361 876 aa6.79□□□□□ -1.32
RPL39YJL189W EDS1P38073 919 aa6.77□□□□□ -1.33
RPL39YJL189W ABP1P15891 592 aaKnown RBP6.76□□□□□ -1.33
RPL39YJL189W PTC4P38089 393 aa6.76□□□□□ -1.33
RPL39YJL189W YDL129WQ07555 291 aa6.75□□□□□ -1.33
RPL39YJL189W GRE2Q12068 342 aaKnown RBP6.75□□□□□ -1.33
RPL39YJL189W MAK11P20484 414 aaKnown RBP6.74□□□□□ -1.33
RPL39YJL189W PTC3P34221 468 aaKnown RBP6.73□□□□□ -1.33
RPL39YJL189W YDR344CQ05510 147 aa6.73□□□□□ -1.33
RPL39YJL189W COQ8P27697 501 aa6.69□□□□□ -1.34
RPL39YJL189W ATH1P48016 1211 aa6.69□□□□□ -1.34
RPL39YJL189W PML39Q03760 334 aa6.69□□□□□ -1.34
RPL39YJL189W CHL1P22516 861 aaPredicted RBP6.66□□□□□ -1.34
RPL39YJL189W GUT1P32190 709 aa6.66□□□□□ -1.34
RPL39YJL189W PRE3P38624 215 aa6.66□□□□□ -1.34
RPL39YJL189W SOL3P38858 249 aa6.65□□□□□ -1.34
RPL39YJL189W MID1P41821 548 aa6.65□□□□□ -1.34
RPL39YJL189W NST1P53935 1240 aa6.65□□□□□ -1.34
RPL39YJL189W BCK2P33306 851 aa6.63□□□□□ -1.35
RPL39YJL189W ILV3P39522 585 aaKnown RBP6.59□□□□□ -1.35
RPL39YJL189W ELP4Q02884 456 aaKnown RBP6.59□□□□□ -1.35
RPL39YJL189W VRP1P37370 817 aa6.56□□□□□ -1.36
RPL39YJL189W MPH3P0CE00 602 aa6.54□□□□□ -1.36
RPL39YJL189W ARH1P48360 493 aa6.52□□□□□ -1.37
RPL39YJL189W AI4P03878 556 aa6.51□□□□□ -1.37
RPL39YJL189W YGR273CP53329 174 aa6.51□□□□□ -1.37
RPL39YJL189W PEX29Q03370 554 aa6.51□□□□□ -1.37
RPL39YJL189W XDJ1P39102 459 aa6.46□□□□□ -1.38
RPL39YJL189W MPC54Q08550 464 aa6.45□□□□□ -1.38
RPL39YJL189W HAP5Q02516 242 aa6.44□□□□□ -1.38
RPL39YJL189W NOP53Q12080 455 aaKnown RBP6.44□□□□□ -1.38
RPL39YJL189W SPT23P35210 1082 aa6.43□□□□□ -1.38
RPL39YJL189W SLI15P38283 698 aa6.43□□□□□ -1.38
RPL39YJL189W NMA111P53920 997 aa6.41□□□□□ -1.38
RPL39YJL189W SET1P38827 1080 aaKnown RBP6.39□□□□□ -1.39
RPL39YJL189W KEX1P09620 729 aa6.38□□□□□ -1.39
RPL39YJL189W BNI4P53858 892 aa6.37□□□□□ -1.39
RPL39YJL189W DPS1P04802 557 aaKnown RBP6.36□□□□□ -1.39
RPL39YJL189W PTC2P39966 464 aaKnown RBP6.36□□□□□ -1.39
RPL39YJL189W DPL1Q05567 589 aa6.36□□□□□ -1.39
RPL39YJL189W VHR2P40041 505 aa6.35□□□□□ -1.39
RPL39YJL189W CDC73Q06697 393 aa6.35□□□□□ -1.39
RPL39YJL189W UBP14P38237 781 aaKnown RBP6.33□□□□□ -1.4
RPL39YJL189W YML082WQ04533 649 aaKnown RBP6.33□□□□□ -1.4
RPL39YJL189W YLR326WQ06170 240 aaKnown RBP6.33□□□□□ -1.4
RPL39YJL189W YPR015CQ12531 247 aa6.32□□□□□ -1.4
RPL39YJL189W PCS60P38137 543 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
RPL39YJL189W PDR1P12383 1068 aa6.27□□□□□ -1.41
RPL39YJL189W RAM1P22007 431 aa6.27□□□□□ -1.41
RPL39YJL189W ISU2Q12056 156 aa6.27□□□□□ -1.41
RPL39YJL189W RAS1P01119 309 aa6.24□□□□□ -1.41
RPL39YJL189W RAD54P32863 898 aa6.24□□□□□ -1.41
RPL39YJL189W SRC1Q03707 834 aa6.23□□□□□ -1.41
RPL39YJL189W YDR090CQ03193 310 aa6.21□□□□□ -1.42
RPL39YJL189W GYP1Q08484 637 aa6.18□□□□□ -1.42
RPL39YJL189W SDH2P21801 266 aa6.15□□□□□ -1.42
RPL39YJL189W YRR1Q12172 810 aa6.14□□□□□ -1.43
RPL39YJL189W KIC1P38692 1080 aa6.13□□□□□ -1.43
RPL39YJL189W VPS70P47161 811 aa6.12□□□□□ -1.43
RPL39YJL189W REF2P42073 533 aaPredicted RBP6.11□□□□□ -1.43
RPL39YJL189W IFH1P39520 1085 aa6.1□□□□□ -1.43
RPL39YJL189W PEX21P50091 288 aa6.1□□□□□ -1.43
RPL39YJL189W YPR148CQ06523 435 aa6.1□□□□□ -1.43
RPL39YJL189W BUD20Q08004 166 aaPredicted RBP6.1□□□□□ -1.43
RPL39YJL189W RPP1BP10622 106 aaKnown RBP6.09□□□□□ -1.43
RPL39YJL189W AMS1P22855 1083 aa6.09□□□□□ -1.43
RPL39YJL189W STR2P47164 639 aa6.09□□□□□ -1.43
RPL39YJL189W TUM1Q08686 304 aaKnown RBP6.09□□□□□ -1.43
RPL39YJL189W GAP1P19145 602 aaPredicted RBP6.08□□□□□ -1.44
RPL39YJL189W ISM1P48526 1002 aa6.08□□□□□ -1.44
RPL39YJL189W ORC6P38826 435 aa6.06□□□□□ -1.44
RPL39YJL189W SAS4Q04003 481 aa6.06□□□□□ -1.44
RPL39YJL189W NUD1P32336 851 aa6.05□□□□□ -1.44
RPL39YJL189W PRT1P06103 763 aaKnown RBP6.04□□□□□ -1.44
RPL39YJL189W CSC1Q06538 782 aa6.04□□□□□ -1.44
RPL39YJL189W TFB4Q12004 338 aa6.03□□□□□ -1.44
RPL39YJL189W COX6P00427 148 aa6.01□□□□□ -1.45
RPL39YJL189W TRK1P12685 1235 aa6□□□□□ -1.45
RPL39YJL189W GCD11P32481 527 aaKnown RBP6□□□□□ -1.45
RPL39YJL189W MVP1P40959 511 aaKnown RBP6□□□□□ -1.45
RPL39YJL189W TY1A-DR4O74302 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-HP0C2I4 478 aaKnown RBP5.99□□□□□ -1.45
RPL39YJL189W TY1A-AP0CX57 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-PR1P0CX58 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-ORP0CX59 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-PR2P0CX60 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-DR5P0CX65 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-ER2P0CX66 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-GR3P0CX67 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-LR1P0CX68 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-MR2P0CX69 440 aa5.99□□□□□ -1.45
RPL39YJL189W SEC2P17065 759 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-JR2P47099 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-DR1Q03856 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-ML1Q04706 440 aaKnown RBP5.99□□□□□ -1.45
RPL39YJL189W TY1A-BRQ12217 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-NL2Q12470 440 aa5.99□□□□□ -1.45
RPL39YJL189W TY1A-GR2Q12485 440 aa5.99□□□□□ -1.45
RPL39YJL189W YEL077CQ3E7X8 1277 aa5.99□□□□□ -1.45
RPL39YJL189W NPL4P33755 580 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms