RNA–Protein interactions for RNA: YJL173C

RFA3, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA3, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA3YJL173C VPS70P47161 811 aa8.58□□□□□ -1.04
RFA3YJL173C IOC2Q12072 812 aa8.53□□□□□ -1.04
RFA3YJL173C LDB19Q12502 818 aa8.53□□□□□ -1.04
RFA3YJL173C SIS1P25294 352 aaKnown RBP8.52□□□□□ -1.05
RFA3YJL173C YEL023CP39992 682 aa8.52□□□□□ -1.05
RFA3YJL173C CKB1P43639 278 aa8.5□□□□□ -1.05
RFA3YJL173C YGR273CP53329 174 aa8.48□□□□□ -1.05
RFA3YJL173C JIP4Q03361 876 aa8.48□□□□□ -1.05
RFA3YJL173C PTC4P38089 393 aa8.47□□□□□ -1.05
RFA3YJL173C YNL035CP53962 389 aaKnown RBP8.47□□□□□ -1.05
RFA3YJL173C RTG1P32607 177 aa8.46□□□□□ -1.06
RFA3YJL173C SOL3P38858 249 aa8.45□□□□□ -1.06
RFA3YJL173C REF2P42073 533 aaPredicted RBP8.44□□□□□ -1.06
RFA3YJL173C VHR2P40041 505 aa8.42□□□□□ -1.06
RFA3YJL173C SEC61P32915 480 aa8.41□□□□□ -1.06
RFA3YJL173C TFG1P41895 735 aaPredicted RBP8.41□□□□□ -1.06
RFA3YJL173C DAN4P47179 1161 aa8.41□□□□□ -1.06
RFA3YJL173C NST1P53935 1240 aa8.41□□□□□ -1.06
RFA3YJL173C AI4P03878 556 aa8.4□□□□□ -1.06
RFA3YJL173C FKH1P40466 484 aa8.4□□□□□ -1.06
RFA3YJL173C MPH3P0CE00 602 aa8.39□□□□□ -1.07
RFA3YJL173C SPB4P25808 606 aaPredicted RBP8.39□□□□□ -1.07
RFA3YJL173C NCR1Q12200 1170 aa8.39□□□□□ -1.07
RFA3YJL173C PBS2P08018 668 aa8.37□□□□□ -1.07
RFA3YJL173C KEX1P09620 729 aa8.37□□□□□ -1.07
RFA3YJL173C UBP14P38237 781 aaKnown RBP8.37□□□□□ -1.07
RFA3YJL173C YLR326WQ06170 240 aaKnown RBP8.37□□□□□ -1.07
RFA3YJL173C KIC1P38692 1080 aa8.35□□□□□ -1.07
RFA3YJL173C AIR2Q12476 344 aaKnown RBP8.35□□□□□ -1.07
RFA3YJL173C MAK21Q12176 1025 aaKnown RBP8.34□□□□□ -1.07
RFA3YJL173C RAD54P32863 898 aa8.33□□□□□ -1.08
RFA3YJL173C ILV3P39522 585 aaKnown RBP8.33□□□□□ -1.08
RFA3YJL173C YJL171CP46992 396 aa8.32□□□□□ -1.08
RFA3YJL173C PML39Q03760 334 aa8.32□□□□□ -1.08
RFA3YJL173C COX6P00427 148 aa8.3□□□□□ -1.08
RFA3YJL173C YDR090CQ03193 310 aa8.3□□□□□ -1.08
RFA3YJL173C PCS60P38137 543 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
RFA3YJL173C DSF2P38213 736 aa8.29□□□□□ -1.08
RFA3YJL173C YDL129WQ07555 291 aa8.29□□□□□ -1.08
RFA3YJL173C MAM3Q12296 706 aa8.28□□□□□ -1.08
RFA3YJL173C SLI15P38283 698 aa8.27□□□□□ -1.09
RFA3YJL173C BMT6Q12291 365 aa8.26□□□□□ -1.09
RFA3YJL173C SAP30P38429 201 aa8.25□□□□□ -1.09
RFA3YJL173C MID1P41821 548 aa8.25□□□□□ -1.09
RFA3YJL173C PEX29Q03370 554 aa8.25□□□□□ -1.09
RFA3YJL173C RPP1BP10622 106 aaKnown RBP8.22□□□□□ -1.09
RFA3YJL173C LEU3P08638 886 aa8.21□□□□□ -1.1
RFA3YJL173C IES2P40154 320 aa8.21□□□□□ -1.1
RFA3YJL173C DPL1Q05567 589 aa8.17□□□□□ -1.1
RFA3YJL173C MPC54Q08550 464 aa8.17□□□□□ -1.1
RFA3YJL173C CDC73Q06697 393 aa8.16□□□□□ -1.1
RFA3YJL173C ORC6P38826 435 aa8.13□□□□□ -1.11
RFA3YJL173C NUP42P49686 430 aaKnown RBP8.13□□□□□ -1.11
RFA3YJL173C NMA111P53920 997 aa8.12□□□□□ -1.11
RFA3YJL173C ELP4Q02884 456 aaKnown RBP8.12□□□□□ -1.11
RFA3YJL173C ARH1P48360 493 aa8.11□□□□□ -1.11
RFA3YJL173C PEX21P50091 288 aa8.11□□□□□ -1.11
RFA3YJL173C DIT2P21595 489 aa8.1□□□□□ -1.11
RFA3YJL173C HAP5Q02516 242 aa8.1□□□□□ -1.11
RFA3YJL173C CSC1Q06538 782 aa8.1□□□□□ -1.11
RFA3YJL173C PSE1P32337 1089 aaKnown RBP8.09□□□□□ -1.11
RFA3YJL173C ISU2Q12056 156 aa8.09□□□□□ -1.11
RFA3YJL173C PRE3P38624 215 aa8.08□□□□□ -1.12
RFA3YJL173C YNR021WP53723 404 aaKnown RBP8.07□□□□□ -1.12
RFA3YJL173C GAP1P19145 602 aaPredicted RBP8.06□□□□□ -1.12
RFA3YJL173C CHL1P22516 861 aaPredicted RBP8.06□□□□□ -1.12
RFA3YJL173C YDR344CQ05510 147 aa8.06□□□□□ -1.12
RFA3YJL173C TFB4Q12004 338 aa8.06□□□□□ -1.12
RFA3YJL173C MVP1P40959 511 aaKnown RBP8.05□□□□□ -1.12
RFA3YJL173C RGR1P19263 1082 aa8.04□□□□□ -1.12
RFA3YJL173C RPN1P38764 993 aaKnown RBP8.04□□□□□ -1.12
RFA3YJL173C GLC3P32775 704 aa8.03□□□□□ -1.12
RFA3YJL173C SPT23P35210 1082 aa8.02□□□□□ -1.13
RFA3YJL173C ATF2P53296 535 aa8.02□□□□□ -1.13
RFA3YJL173C BNI4P53858 892 aa8.02□□□□□ -1.13
RFA3YJL173C TUM1Q08686 304 aaKnown RBP8.02□□□□□ -1.13
RFA3YJL173C YRR1Q12172 810 aa8.01□□□□□ -1.13
RFA3YJL173C CLB5P30283 435 aa7.99□□□□□ -1.13
RFA3YJL173C PTC2P39966 464 aaKnown RBP7.99□□□□□ -1.13
RFA3YJL173C YPR109WQ06104 294 aa7.98□□□□□ -1.13
RFA3YJL173C TEA1P47988 759 aa7.97□□□□□ -1.13
RFA3YJL173C AIM7Q12156 149 aa7.97□□□□□ -1.13
RFA3YJL173C LEO1P38439 464 aa7.96□□□□□ -1.14
RFA3YJL173C PDR1P12383 1068 aa7.95□□□□□ -1.14
RFA3YJL173C NPL4P33755 580 aa7.92□□□□□ -1.14
RFA3YJL173C NUD1P32336 851 aa7.91□□□□□ -1.14
RFA3YJL173C YML082WQ04533 649 aaKnown RBP7.91□□□□□ -1.14
RFA3YJL173C KIN1P13185 1064 aa7.9□□□□□ -1.14
RFA3YJL173C RAM1P22007 431 aa7.87□□□□□ -1.15
RFA3YJL173C BCK2P33306 851 aa7.87□□□□□ -1.15
RFA3YJL173C VRP1P37370 817 aa7.87□□□□□ -1.15
RFA3YJL173C YMR196WQ04336 1088 aa7.87□□□□□ -1.15
RFA3YJL173C NIS1P53939 407 aa7.85□□□□□ -1.15
RFA3YJL173C YPR015CQ12531 247 aa7.85□□□□□ -1.15
RFA3YJL173C STR2P47164 639 aa7.84□□□□□ -1.15
RFA3YJL173C ISM1P48526 1002 aa7.83□□□□□ -1.16
RFA3YJL173C FPK1P53739 893 aa7.82□□□□□ -1.16
RFA3YJL173C GCD11P32481 527 aaKnown RBP7.81□□□□□ -1.16
RFA3YJL173C GYP1Q08484 637 aa7.81□□□□□ -1.16
RFA3YJL173C KEX2P13134 814 aa7.8□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms