RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C HTA2P04912 132 aa5.7□□□□□ -1.5
YIR040CYIR040C FKH1P40466 484 aa5.7□□□□□ -1.5
YIR040CYIR040C NST1P53935 1240 aa5.69□□□□□ -1.5
YIR040CYIR040C AIR2Q12476 344 aaKnown RBP5.69□□□□□ -1.5
YIR040CYIR040C RTG1P32607 177 aa5.67□□□□□ -1.5
YIR040CYIR040C YEL023CP39992 682 aa5.66□□□□□ -1.5
YIR040CYIR040C DAN4P47179 1161 aa5.66□□□□□ -1.5
YIR040CYIR040C YNL035CP53962 389 aaKnown RBP5.66□□□□□ -1.5
YIR040CYIR040C YPR148CQ06523 435 aa5.66□□□□□ -1.5
YIR040CYIR040C ILV3P39522 585 aaKnown RBP5.64□□□□□ -1.51
YIR040CYIR040C YGR273CP53329 174 aa5.64□□□□□ -1.51
YIR040CYIR040C PTC4P38089 393 aa5.63□□□□□ -1.51
YIR040CYIR040C JIP4Q03361 876 aa5.63□□□□□ -1.51
YIR040CYIR040C RQC2Q12532 1038 aaKnown RBP5.63□□□□□ -1.51
YIR040CYIR040C SEC61P32915 480 aa5.62□□□□□ -1.51
YIR040CYIR040C VPS70P47161 811 aa5.62□□□□□ -1.51
YIR040CYIR040C IFH1P39520 1085 aa5.61□□□□□ -1.51
YIR040CYIR040C SAS10Q12136 610 aaPredicted RBP5.61□□□□□ -1.51
YIR040CYIR040C NCR1Q12200 1170 aa5.61□□□□□ -1.51
YIR040CYIR040C MPH3P0CE00 602 aa5.59□□□□□ -1.51
YIR040CYIR040C AI4P03878 556 aa5.58□□□□□ -1.52
YIR040CYIR040C UBP14P38237 781 aaKnown RBP5.58□□□□□ -1.52
YIR040CYIR040C VHR2P40041 505 aa5.57□□□□□ -1.52
YIR040CYIR040C YLR326WQ06170 240 aaKnown RBP5.57□□□□□ -1.52
YIR040CYIR040C KEX1P09620 729 aa5.55□□□□□ -1.52
YIR040CYIR040C PML39Q03760 334 aa5.55□□□□□ -1.52
YIR040CYIR040C BMT6Q12291 365 aa5.55□□□□□ -1.52
YIR040CYIR040C MID1P41821 548 aa5.54□□□□□ -1.52
YIR040CYIR040C YDL129WQ07555 291 aa5.54□□□□□ -1.52
YIR040CYIR040C TFG1P41895 735 aaPredicted RBP5.53□□□□□ -1.52
YIR040CYIR040C REF2P42073 533 aaPredicted RBP5.53□□□□□ -1.52
YIR040CYIR040C YDR090CQ03193 310 aa5.53□□□□□ -1.52
YIR040CYIR040C SAP30P38429 201 aa5.52□□□□□ -1.53
YIR040CYIR040C YDR344CQ05510 147 aa5.52□□□□□ -1.53
YIR040CYIR040C PCS60P38137 543 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
YIR040CYIR040C SLI15P38283 698 aa5.51□□□□□ -1.53
YIR040CYIR040C CKB1P43639 278 aa5.49□□□□□ -1.53
YIR040CYIR040C RAD54P32863 898 aa5.48□□□□□ -1.53
YIR040CYIR040C PBS2P08018 668 aa5.46□□□□□ -1.54
YIR040CYIR040C MPC54Q08550 464 aa5.46□□□□□ -1.54
YIR040CYIR040C COX6P00427 148 aa5.45□□□□□ -1.54
YIR040CYIR040C PEX29Q03370 554 aa5.45□□□□□ -1.54
YIR040CYIR040C CDC73Q06697 393 aa5.45□□□□□ -1.54
YIR040CYIR040C MAK21Q12176 1025 aaKnown RBP5.43□□□□□ -1.54
YIR040CYIR040C DSF2P38213 736 aa5.42□□□□□ -1.54
YIR040CYIR040C KIC1P38692 1080 aa5.42□□□□□ -1.54
YIR040CYIR040C PRE3P38624 215 aa5.41□□□□□ -1.54
YIR040CYIR040C ARH1P48360 493 aa5.41□□□□□ -1.54
YIR040CYIR040C DPL1Q05567 589 aa5.41□□□□□ -1.54
YIR040CYIR040C SPB4P25808 606 aaPredicted RBP5.4□□□□□ -1.54
YIR040CYIR040C ELP4Q02884 456 aaKnown RBP5.4□□□□□ -1.54
YIR040CYIR040C NMA111P53920 997 aa5.39□□□□□ -1.55
YIR040CYIR040C GAP1P19145 602 aaPredicted RBP5.38□□□□□ -1.55
YIR040CYIR040C CHL1P22516 861 aaPredicted RBP5.38□□□□□ -1.55
YIR040CYIR040C ORC6P38826 435 aa5.38□□□□□ -1.55
YIR040CYIR040C HAP5Q02516 242 aa5.38□□□□□ -1.55
YIR040CYIR040C MAM3Q12296 706 aa5.38□□□□□ -1.55
YIR040CYIR040C IES2P40154 320 aa5.37□□□□□ -1.55
YIR040CYIR040C ISU2Q12056 156 aa5.36□□□□□ -1.55
YIR040CYIR040C NUP42P49686 430 aaKnown RBP5.35□□□□□ -1.55
YIR040CYIR040C SPT23P35210 1082 aa5.34□□□□□ -1.55
YIR040CYIR040C BNI4P53858 892 aa5.34□□□□□ -1.55
YIR040CYIR040C DIT2P21595 489 aa5.33□□□□□ -1.56
YIR040CYIR040C RPP1BP10622 106 aaKnown RBP5.32□□□□□ -1.56
YIR040CYIR040C PDR1P12383 1068 aa5.32□□□□□ -1.56
YIR040CYIR040C MVP1P40959 511 aaKnown RBP5.32□□□□□ -1.56
YIR040CYIR040C CSC1Q06538 782 aa5.32□□□□□ -1.56
YIR040CYIR040C RGR1P19263 1082 aa5.31□□□□□ -1.56
YIR040CYIR040C RAM1P22007 431 aa5.31□□□□□ -1.56
YIR040CYIR040C YPR015CQ12531 247 aa5.31□□□□□ -1.56
YIR040CYIR040C TFB4Q12004 338 aa5.3□□□□□ -1.56
YIR040CYIR040C YRR1Q12172 810 aa5.3□□□□□ -1.56
YIR040CYIR040C PSE1P32337 1089 aaKnown RBP5.29□□□□□ -1.56
YIR040CYIR040C PTC2P39966 464 aaKnown RBP5.29□□□□□ -1.56
YIR040CYIR040C PEX21P50091 288 aa5.29□□□□□ -1.56
YIR040CYIR040C TUM1Q08686 304 aaKnown RBP5.29□□□□□ -1.56
YIR040CYIR040C YML082WQ04533 649 aaKnown RBP5.28□□□□□ -1.56
YIR040CYIR040C YPR109WQ06104 294 aa5.28□□□□□ -1.56
YIR040CYIR040C BCK2P33306 851 aa5.27□□□□□ -1.57
YIR040CYIR040C VRP1P37370 817 aa5.27□□□□□ -1.57
YIR040CYIR040C LEU3P08638 886 aa5.26□□□□□ -1.57
YIR040CYIR040C STR2P47164 639 aa5.24□□□□□ -1.57
YIR040CYIR040C YNR021WP53723 404 aaKnown RBP5.24□□□□□ -1.57
YIR040CYIR040C NUD1P32336 851 aa5.23□□□□□ -1.57
YIR040CYIR040C GLC3P32775 704 aa5.23□□□□□ -1.57
YIR040CYIR040C ISM1P48526 1002 aa5.23□□□□□ -1.57
YIR040CYIR040C TAF7Q05021 590 aa5.23□□□□□ -1.57
YIR040CYIR040C BUD20Q08004 166 aaPredicted RBP5.22□□□□□ -1.57
YIR040CYIR040C XDJ1P39102 459 aa5.2□□□□□ -1.58
YIR040CYIR040C TEA1P47988 759 aa5.19□□□□□ -1.58
YIR040CYIR040C ERF2Q06551 359 aa5.19□□□□□ -1.58
YIR040CYIR040C TY1A-DR4O74302 440 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-HP0C2I4 478 aaKnown RBP5.18□□□□□ -1.58
YIR040CYIR040C TY1A-AP0CX57 440 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-PR1P0CX58 440 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-ORP0CX59 440 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-PR2P0CX60 440 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-DR5P0CX65 440 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-ER2P0CX66 440 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-GR3P0CX67 440 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms