RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C CHL1P22516 861 aaPredicted RBP9.67□□□□□ -0.86
SDS3YIL084C YEL023CP39992 682 aa9.67□□□□□ -0.86
SDS3YIL084C ABP1P15891 592 aaKnown RBP9.66□□□□□ -0.86
SDS3YIL084C PTC4P38089 393 aa9.65□□□□□ -0.86
SDS3YIL084C PRE3P38624 215 aa9.65□□□□□ -0.86
SDS3YIL084C YDR344CQ05510 147 aa9.65□□□□□ -0.86
SDS3YIL084C PML39Q03760 334 aa9.52□□□□□ -0.89
SDS3YIL084C GRE2Q12068 342 aaKnown RBP9.51□□□□□ -0.89
SDS3YIL084C VRP1P37370 817 aa9.48□□□□□ -0.89
SDS3YIL084C EDS1P38073 919 aa9.46□□□□□ -0.9
SDS3YIL084C MIF2P35201 549 aa9.45□□□□□ -0.9
SDS3YIL084C NST1P53935 1240 aa9.42□□□□□ -0.9
SDS3YIL084C ELP4Q02884 456 aaKnown RBP9.42□□□□□ -0.9
SDS3YIL084C RAM2P29703 316 aa9.41□□□□□ -0.9
SDS3YIL084C XDJ1P39102 459 aa9.41□□□□□ -0.9
SDS3YIL084C MID1P41821 548 aa9.41□□□□□ -0.9
SDS3YIL084C PTC3P34221 468 aaKnown RBP9.4□□□□□ -0.9
SDS3YIL084C ATH1P48016 1211 aa9.38□□□□□ -0.91
SDS3YIL084C MAK11P20484 414 aaKnown RBP9.37□□□□□ -0.91
SDS3YIL084C GUT1P32190 709 aa9.37□□□□□ -0.91
SDS3YIL084C SOL3P38858 249 aa9.37□□□□□ -0.91
SDS3YIL084C ARH1P48360 493 aa9.34□□□□□ -0.91
SDS3YIL084C ILV3P39522 585 aaKnown RBP9.29□□□□□ -0.92
SDS3YIL084C DPS1P04802 557 aaKnown RBP9.28□□□□□ -0.92
SDS3YIL084C COQ8P27697 501 aa9.28□□□□□ -0.92
SDS3YIL084C MPH3P0CE00 602 aa9.24□□□□□ -0.93
SDS3YIL084C PEX29Q03370 554 aa9.23□□□□□ -0.93
SDS3YIL084C RQC2Q12532 1038 aaKnown RBP9.22□□□□□ -0.93
SDS3YIL084C AI4P03878 556 aa9.21□□□□□ -0.94
SDS3YIL084C SPT23P35210 1082 aa9.21□□□□□ -0.94
SDS3YIL084C HAP5Q02516 242 aa9.16□□□□□ -0.94
SDS3YIL084C SRC1Q03707 834 aa9.15□□□□□ -0.94
SDS3YIL084C YGR273CP53329 174 aa9.12□□□□□ -0.95
SDS3YIL084C MPC54Q08550 464 aa9.12□□□□□ -0.95
SDS3YIL084C BNI4P53858 892 aa9.11□□□□□ -0.95
SDS3YIL084C YML082WQ04533 649 aaKnown RBP9.07□□□□□ -0.96
SDS3YIL084C PTC2P39966 464 aaKnown RBP9.05□□□□□ -0.96
SDS3YIL084C NMA111P53920 997 aa9.05□□□□□ -0.96
SDS3YIL084C SLI15P38283 698 aa9.04□□□□□ -0.96
SDS3YIL084C YPR015CQ12531 247 aa9.01□□□□□ -0.97
SDS3YIL084C NOP53Q12080 455 aaKnown RBP8.99□□□□□ -0.97
SDS3YIL084C RAS1P01119 309 aa8.98□□□□□ -0.97
SDS3YIL084C DPL1Q05567 589 aa8.96□□□□□ -0.98
SDS3YIL084C RAM1P22007 431 aa8.93□□□□□ -0.98
SDS3YIL084C RGA2Q06407 1009 aa8.9□□□□□ -0.98
SDS3YIL084C KEX1P09620 729 aa8.89□□□□□ -0.99
SDS3YIL084C CDC73Q06697 393 aa8.88□□□□□ -0.99
SDS3YIL084C ISU2Q12056 156 aa8.84□□□□□ -0.99
SDS3YIL084C PDR1P12383 1068 aa8.83□□□□□ -1
SDS3YIL084C RGA1P39083 1007 aa8.83□□□□□ -1
SDS3YIL084C DMA1P38823 416 aa8.81□□□□□ -1
SDS3YIL084C SDH2P21801 266 aa8.79□□□□□ -1
SDS3YIL084C YLR326WQ06170 240 aaKnown RBP8.78□□□□□ -1
SDS3YIL084C GYP1Q08484 637 aa8.78□□□□□ -1
SDS3YIL084C UBP14P38237 781 aaKnown RBP8.77□□□□□ -1.01
SDS3YIL084C AMS1P22855 1083 aa8.76□□□□□ -1.01
SDS3YIL084C VHR2P40041 505 aa8.75□□□□□ -1.01
SDS3YIL084C PCS60P38137 543 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
SDS3YIL084C SET1P38827 1080 aaKnown RBP8.71□□□□□ -1.02
SDS3YIL084C TRK1P12685 1235 aa8.7□□□□□ -1.02
SDS3YIL084C RAD54P32863 898 aa8.63□□□□□ -1.03
SDS3YIL084C SAS4Q04003 481 aa8.63□□□□□ -1.03
SDS3YIL084C BUD20Q08004 166 aaPredicted RBP8.61□□□□□ -1.03
SDS3YIL084C YDR090CQ03193 310 aa8.6□□□□□ -1.03
SDS3YIL084C YRR1Q12172 810 aa8.56□□□□□ -1.04
SDS3YIL084C STR2P47164 639 aa8.55□□□□□ -1.04
SDS3YIL084C YEL077CQ3E7X8 1277 aa8.54□□□□□ -1.04
SDS3YIL084C PRT1P06103 763 aaKnown RBP8.52□□□□□ -1.05
SDS3YIL084C ISM1P48526 1002 aa8.52□□□□□ -1.05
SDS3YIL084C GAP1P19145 602 aaPredicted RBP8.5□□□□□ -1.05
SDS3YIL084C RPP1BP10622 106 aaKnown RBP8.49□□□□□ -1.05
SDS3YIL084C AIR1P40507 360 aaKnown RBP8.48□□□□□ -1.05
SDS3YIL084C CLA4P48562 842 aa8.48□□□□□ -1.05
SDS3YIL084C MRF1P30775 413 aaPredicted RBP8.47□□□□□ -1.05
SDS3YIL084C CST6P40535 587 aa8.46□□□□□ -1.06
SDS3YIL084C PEX21P50091 288 aa8.46□□□□□ -1.06
SDS3YIL084C TUM1Q08686 304 aaKnown RBP8.45□□□□□ -1.06
SDS3YIL084C NUD1P32336 851 aa8.44□□□□□ -1.06
SDS3YIL084C KIC1P38692 1080 aa8.43□□□□□ -1.06
SDS3YIL084C YPL062WQ02781 134 aa8.43□□□□□ -1.06
SDS3YIL084C TY1A-DR4O74302 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-HP0C2I4 478 aaKnown RBP8.41□□□□□ -1.06
SDS3YIL084C TY1A-AP0CX57 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-PR1P0CX58 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-ORP0CX59 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-PR2P0CX60 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-DR5P0CX65 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-ER2P0CX66 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-GR3P0CX67 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-LR1P0CX68 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-MR2P0CX69 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-JR2P47099 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-DR1Q03856 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-ML1Q04706 440 aaKnown RBP8.41□□□□□ -1.06
SDS3YIL084C TY1A-BRQ12217 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-NL2Q12470 440 aa8.41□□□□□ -1.06
SDS3YIL084C TY1A-GR2Q12485 440 aa8.41□□□□□ -1.06
SDS3YIL084C ERG12P07277 443 aa8.4□□□□□ -1.06
SDS3YIL084C SEC2P17065 759 aa8.4□□□□□ -1.06
SDS3YIL084C CSC1Q06538 782 aa8.4□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms