RNA–Protein interactions for RNA: YHR190W

ERG9, Transcript of Farnesyl-diphosphate farnesyl transferase (squalene synthase), yeastyeast

Gene ERG9, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ERG9YHR190W ATH1P48016 1211 aa8.41□□□□□ -1.06
ERG9YHR190W NOP53Q12080 455 aaKnown RBP8.41□□□□□ -1.06
ERG9YHR190W PTC3P34221 468 aaKnown RBP8.4□□□□□ -1.06
ERG9YHR190W NCR1Q12200 1170 aa8.4□□□□□ -1.06
ERG9YHR190W GUT1P32190 709 aa8.38□□□□□ -1.07
ERG9YHR190W BMT6Q12291 365 aa8.38□□□□□ -1.07
ERG9YHR190W EDS1P38073 919 aa8.37□□□□□ -1.07
ERG9YHR190W PTC4P38089 393 aa8.35□□□□□ -1.07
ERG9YHR190W YEL023CP39992 682 aa8.35□□□□□ -1.07
ERG9YHR190W DAN4P47179 1161 aa8.31□□□□□ -1.08
ERG9YHR190W SET1P38827 1080 aaKnown RBP8.27□□□□□ -1.09
ERG9YHR190W YDL129WQ07555 291 aa8.26□□□□□ -1.09
ERG9YHR190W SAP30P38429 201 aa8.21□□□□□ -1.1
ERG9YHR190W IFH1P39520 1085 aa8.21□□□□□ -1.1
ERG9YHR190W AI4P03878 556 aa8.18□□□□□ -1.1
ERG9YHR190W MPH3P0CE00 602 aa8.17□□□□□ -1.1
ERG9YHR190W PML39Q03760 334 aa8.17□□□□□ -1.1
ERG9YHR190W YGR273CP53329 174 aa8.16□□□□□ -1.1
ERG9YHR190W SOL3P38858 249 aa8.15□□□□□ -1.1
ERG9YHR190W NST1P53935 1240 aa8.15□□□□□ -1.1
ERG9YHR190W CHL1P22516 861 aaPredicted RBP8.11□□□□□ -1.11
ERG9YHR190W PRE3P38624 215 aa8.09□□□□□ -1.11
ERG9YHR190W PEX29Q03370 554 aa8.09□□□□□ -1.11
ERG9YHR190W ELP4Q02884 456 aaKnown RBP8.05□□□□□ -1.12
ERG9YHR190W MID1P41821 548 aa8.04□□□□□ -1.12
ERG9YHR190W KEX1P09620 729 aa8.03□□□□□ -1.12
ERG9YHR190W ARH1P48360 493 aa8.03□□□□□ -1.12
ERG9YHR190W YPR148CQ06523 435 aa8.03□□□□□ -1.12
ERG9YHR190W ILV3P39522 585 aaKnown RBP8.02□□□□□ -1.13
ERG9YHR190W BCK2P33306 851 aa7.99□□□□□ -1.13
ERG9YHR190W SLI15P38283 698 aa7.99□□□□□ -1.13
ERG9YHR190W DMA1P38823 416 aa7.99□□□□□ -1.13
ERG9YHR190W VHR2P40041 505 aa7.99□□□□□ -1.13
ERG9YHR190W RPP1BP10622 106 aaKnown RBP7.98□□□□□ -1.13
ERG9YHR190W UBP14P38237 781 aaKnown RBP7.98□□□□□ -1.13
ERG9YHR190W YLR326WQ06170 240 aaKnown RBP7.98□□□□□ -1.13
ERG9YHR190W KIC1P38692 1080 aa7.97□□□□□ -1.13
ERG9YHR190W HAP5Q02516 242 aa7.97□□□□□ -1.13
ERG9YHR190W RAD54P32863 898 aa7.96□□□□□ -1.14
ERG9YHR190W SPT23P35210 1082 aa7.96□□□□□ -1.14
ERG9YHR190W REF2P42073 533 aaPredicted RBP7.96□□□□□ -1.14
ERG9YHR190W VPS70P47161 811 aa7.96□□□□□ -1.14
ERG9YHR190W DPL1Q05567 589 aa7.96□□□□□ -1.14
ERG9YHR190W MPC54Q08550 464 aa7.96□□□□□ -1.14
ERG9YHR190W RQC2Q12532 1038 aaKnown RBP7.95□□□□□ -1.14
ERG9YHR190W CKB1P43639 278 aa7.91□□□□□ -1.14
ERG9YHR190W BNI4P53858 892 aa7.91□□□□□ -1.14
ERG9YHR190W NMA111P53920 997 aa7.91□□□□□ -1.14
ERG9YHR190W MAK21Q12176 1025 aaKnown RBP7.91□□□□□ -1.14
ERG9YHR190W PCS60P38137 543 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
ERG9YHR190W VRP1P37370 817 aa7.89□□□□□ -1.15
ERG9YHR190W PTC2P39966 464 aaKnown RBP7.89□□□□□ -1.15
ERG9YHR190W YDR344CQ05510 147 aa7.89□□□□□ -1.15
ERG9YHR190W ISU2Q12056 156 aa7.89□□□□□ -1.15
ERG9YHR190W YDR090CQ03193 310 aa7.85□□□□□ -1.15
ERG9YHR190W COX6P00427 148 aa7.84□□□□□ -1.15
ERG9YHR190W XDJ1P39102 459 aa7.84□□□□□ -1.15
ERG9YHR190W YML082WQ04533 649 aaKnown RBP7.84□□□□□ -1.15
ERG9YHR190W CDC73Q06697 393 aa7.84□□□□□ -1.15
ERG9YHR190W SAS10Q12136 610 aaPredicted RBP7.82□□□□□ -1.16
ERG9YHR190W PEX21P50091 288 aa7.81□□□□□ -1.16
ERG9YHR190W PBS2P08018 668 aa7.78□□□□□ -1.16
ERG9YHR190W CSC1Q06538 782 aa7.78□□□□□ -1.16
ERG9YHR190W TFB4Q12004 338 aa7.77□□□□□ -1.17
ERG9YHR190W GAP1P19145 602 aaPredicted RBP7.71□□□□□ -1.18
ERG9YHR190W ORC6P38826 435 aa7.71□□□□□ -1.18
ERG9YHR190W MAM3Q12296 706 aa7.71□□□□□ -1.18
ERG9YHR190W SPB4P25808 606 aaPredicted RBP7.7□□□□□ -1.18
ERG9YHR190W YRR1Q12172 810 aa7.7□□□□□ -1.18
ERG9YHR190W RAM1P22007 431 aa7.68□□□□□ -1.18
ERG9YHR190W DSF2P38213 736 aa7.68□□□□□ -1.18
ERG9YHR190W GYP1Q08484 637 aa7.68□□□□□ -1.18
ERG9YHR190W TUM1Q08686 304 aaKnown RBP7.68□□□□□ -1.18
ERG9YHR190W PDR1P12383 1068 aa7.67□□□□□ -1.18
ERG9YHR190W SAS4Q04003 481 aa7.67□□□□□ -1.18
ERG9YHR190W MVP1P40959 511 aaKnown RBP7.66□□□□□ -1.18
ERG9YHR190W DPS1P04802 557 aaKnown RBP7.65□□□□□ -1.18
ERG9YHR190W NPL4P33755 580 aa7.65□□□□□ -1.18
ERG9YHR190W PSE1P32337 1089 aaKnown RBP7.64□□□□□ -1.19
ERG9YHR190W YPR015CQ12531 247 aa7.64□□□□□ -1.19
ERG9YHR190W RGR1P19263 1082 aa7.62□□□□□ -1.19
ERG9YHR190W NUD1P32336 851 aa7.61□□□□□ -1.19
ERG9YHR190W YPR109WQ06104 294 aa7.61□□□□□ -1.19
ERG9YHR190W CLB5P30283 435 aa7.6□□□□□ -1.19
ERG9YHR190W IES2P40154 320 aa7.6□□□□□ -1.19
ERG9YHR190W MRF1P30775 413 aaPredicted RBP7.59□□□□□ -1.19
ERG9YHR190W PRT1P06103 763 aaKnown RBP7.58□□□□□ -1.2
ERG9YHR190W BUD20Q08004 166 aaPredicted RBP7.55□□□□□ -1.2
ERG9YHR190W STR2P47164 639 aa7.54□□□□□ -1.2
ERG9YHR190W ISM1P48526 1002 aa7.54□□□□□ -1.2
ERG9YHR190W GCD11P32481 527 aaKnown RBP7.53□□□□□ -1.2
ERG9YHR190W NUP42P49686 430 aaKnown RBP7.53□□□□□ -1.2
ERG9YHR190W YEL077CQ3E7X8 1277 aa7.53□□□□□ -1.2
ERG9YHR190W PAT1P25644 796 aaKnown RBP7.52□□□□□ -1.21
ERG9YHR190W TEA1P47988 759 aa7.51□□□□□ -1.21
ERG9YHR190W ERG12P07277 443 aa7.5□□□□□ -1.21
ERG9YHR190W AMS1P22855 1083 aa7.5□□□□□ -1.21
ERG9YHR190W SPT16P32558 1035 aaKnown RBP7.5□□□□□ -1.21
ERG9YHR190W DIT2P21595 489 aa7.48□□□□□ -1.21
ERG9YHR190W RTF1P53064 558 aa7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms