RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W MAK21Q12176 1025 aaKnown RBP7.02□□□□□ -1.29
SPC97YHR172W YAF9P53930 226 aa7.01□□□□□ -1.29
SPC97YHR172W RSM7P47150 247 aa7.01□□□□□ -1.29
SPC97YHR172W SEN54Q02825 467 aaPredicted RBP7.01□□□□□ -1.29
SPC97YHR172W NAB3P38996 802 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
SPC97YHR172W CDC3P32457 520 aaKnown RBP6.99□□□□□ -1.29
SPC97YHR172W RPL34AP87262 121 aaPredicted RBP6.99□□□□□ -1.29
SPC97YHR172W BUD21Q08492 214 aaPredicted RBP6.99□□□□□ -1.29
SPC97YHR172W NMD2P38798 1089 aaKnown RBP6.98□□□□□ -1.29
SPC97YHR172W IES2P40154 320 aa6.98□□□□□ -1.29
SPC97YHR172W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
SPC97YHR172W DIT2P21595 489 aa6.96□□□□□ -1.29
SPC97YHR172W ALD4P46367 519 aaKnown RBP6.96□□□□□ -1.3
SPC97YHR172W NUP42P49686 430 aaKnown RBP6.96□□□□□ -1.3
SPC97YHR172W ITT1Q04638 464 aa6.95□□□□□ -1.3
SPC97YHR172W PDR1P12383 1068 aa6.94□□□□□ -1.3
SPC97YHR172W BIM1P40013 344 aa6.94□□□□□ -1.3
SPC97YHR172W KEX1P09620 729 aa6.94□□□□□ -1.3
SPC97YHR172W PSD2P53037 1138 aaKnown RBP6.94□□□□□ -1.3
SPC97YHR172W PKC1P24583 1151 aa6.93□□□□□ -1.3
SPC97YHR172W ATF2P53296 535 aa6.93□□□□□ -1.3
SPC97YHR172W UBX5Q06682 500 aa6.93□□□□□ -1.3
SPC97YHR172W SIS2P36024 562 aa6.93□□□□□ -1.3
SPC97YHR172W NNF1P47149 201 aa6.92□□□□□ -1.3
SPC97YHR172W GLN1P32288 370 aaKnown RBP6.92□□□□□ -1.3
SPC97YHR172W TOM20P35180 183 aa6.91□□□□□ -1.3
SPC97YHR172W ATG32P40458 529 aa6.91□□□□□ -1.3
SPC97YHR172W RPS0BP46654 252 aaKnown RBP6.91□□□□□ -1.3
SPC97YHR172W CST6P40535 587 aa6.9□□□□□ -1.3
SPC97YHR172W YJL007CP47080 104 aa6.9□□□□□ -1.3
SPC97YHR172W ZDS1P50111 915 aaKnown RBP6.89□□□□□ -1.31
SPC97YHR172W CPS1P27614 576 aa6.88□□□□□ -1.31
SPC97YHR172W SSA2P10592 639 aaKnown RBP6.87□□□□□ -1.31
SPC97YHR172W HAT1Q12341 374 aa6.87□□□□□ -1.31
SPC97YHR172W RPL34BP40525 121 aaKnown RBP6.86□□□□□ -1.31
SPC97YHR172W NOB1Q08444 459 aaKnown RBP6.86□□□□□ -1.31
SPC97YHR172W TOA1P32773 286 aa6.86□□□□□ -1.31
SPC97YHR172W RNH70P53331 553 aa6.85□□□□□ -1.31
SPC97YHR172W RRP14P36080 434 aaKnown RBP6.85□□□□□ -1.31
SPC97YHR172W REF2P42073 533 aaPredicted RBP6.84□□□□□ -1.32
SPC97YHR172W TIF1P10081 395 aaKnown RBP6.83□□□□□ -1.32
SPC97YHR172W TTI1P36097 1038 aa6.83□□□□□ -1.32
SPC97YHR172W FPR3P38911 411 aaKnown RBP6.83□□□□□ -1.32
SPC97YHR172W HIF1Q12373 385 aa6.83□□□□□ -1.32
SPC97YHR172W ALD2P47771 506 aa6.83□□□□□ -1.32
SPC97YHR172W KIP3P53086 805 aaKnown RBP6.83□□□□□ -1.32
SPC97YHR172W SVF1Q05515 481 aa6.83□□□□□ -1.32
SPC97YHR172W STM1P39015 273 aaKnown RBP6.82□□□□□ -1.32
SPC97YHR172W ERG12P07277 443 aa6.82□□□□□ -1.32
SPC97YHR172W IPL1P38991 367 aa6.82□□□□□ -1.32
SPC97YHR172W TSR4P25040 408 aa6.81□□□□□ -1.32
SPC97YHR172W TY4A-JP47023 414 aa6.81□□□□□ -1.32
SPC97YHR172W MAK11P20484 414 aaKnown RBP6.8□□□□□ -1.32
SPC97YHR172W SEC20P28791 383 aa6.8□□□□□ -1.32
SPC97YHR172W BRE1Q07457 700 aaKnown RBP6.8□□□□□ -1.32
SPC97YHR172W AI2P03876 854 aa6.79□□□□□ -1.32
SPC97YHR172W MAK16P10962 306 aaPredicted RBP6.79□□□□□ -1.32
SPC97YHR172W TPM2P40414 161 aa6.79□□□□□ -1.32
SPC97YHR172W YOL098CQ12496 1037 aa6.79□□□□□ -1.32
SPC97YHR172W PPG1P32838 368 aa6.79□□□□□ -1.32
SPC97YHR172W PMC1P38929 1173 aaPredicted RBP6.78□□□□□ -1.32
SPC97YHR172W YPR204WQ08995 1032 aa6.78□□□□□ -1.32
SPC97YHR172W NOP53Q12080 455 aaKnown RBP6.78□□□□□ -1.32
SPC97YHR172W GAL11P19659 1081 aa6.77□□□□□ -1.33
SPC97YHR172W TFG1P41895 735 aaPredicted RBP6.77□□□□□ -1.33
SPC97YHR172W CSN12P47130 423 aa6.77□□□□□ -1.33
SPC97YHR172W SSB1P11484 613 aaKnown RBP6.76□□□□□ -1.33
SPC97YHR172W SSB2P40150 613 aaKnown RBP6.76□□□□□ -1.33
SPC97YHR172W NOP2P40991 618 aaKnown RBP6.76□□□□□ -1.33
SPC97YHR172W RRP15Q06511 250 aaPredicted RBP6.76□□□□□ -1.33
SPC97YHR172W PRI1P10363 409 aa6.75□□□□□ -1.33
SPC97YHR172W RCR1P38212 213 aa6.75□□□□□ -1.33
SPC97YHR172W AIM21P40563 679 aa6.75□□□□□ -1.33
SPC97YHR172W COX6P00427 148 aa6.75□□□□□ -1.33
SPC97YHR172W ISW1P38144 1129 aa6.75□□□□□ -1.33
SPC97YHR172W RPT2P40327 437 aaKnown RBP6.74□□□□□ -1.33
SPC97YHR172W YML083CQ04526 418 aa6.74□□□□□ -1.33
SPC97YHR172W RTG2P32608 588 aaKnown RBP6.74□□□□□ -1.33
SPC97YHR172W CWC22P53333 577 aaKnown RBP6.74□□□□□ -1.33
SPC97YHR172W YDL121CQ07541 149 aa6.74□□□□□ -1.33
SPC97YHR172W YOL057WQ08225 711 aa6.74□□□□□ -1.33
SPC97YHR172W PUP1P25043 261 aa6.72□□□□□ -1.33
SPC97YHR172W YKR023WP36119 530 aaKnown RBP6.72□□□□□ -1.33
SPC97YHR172W GIR2Q03768 265 aaPredicted RBP6.72□□□□□ -1.33
SPC97YHR172W RAD2P07276 1031 aa6.72□□□□□ -1.33
SPC97YHR172W BIO2P32451 375 aa6.72□□□□□ -1.33
SPC97YHR172W VMA4P22203 233 aaKnown RBP6.71□□□□□ -1.33
SPC97YHR172W RPS0AP32905 252 aaKnown RBP6.71□□□□□ -1.33
SPC97YHR172W BOI2P39969 1040 aa6.71□□□□□ -1.33
SPC97YHR172W ALG12P53730 551 aa6.71□□□□□ -1.33
SPC97YHR172W TMA64Q04600 565 aaKnown RBP6.71□□□□□ -1.33
SPC97YHR172W MSC6Q08818 692 aaKnown RBP6.71□□□□□ -1.33
SPC97YHR172W POL32P47110 350 aa6.71□□□□□ -1.34
SPC97YHR172W RPA135P22138 1203 aaKnown RBP6.7□□□□□ -1.34
SPC97YHR172W YBL036CP38197 257 aa6.7□□□□□ -1.34
SPC97YHR172W YBL113CQ7M4S9 792 aa6.7□□□□□ -1.34
SPC97YHR172W ATE1P16639 503 aa6.7□□□□□ -1.34
SPC97YHR172W ERP2P39704 215 aa6.7□□□□□ -1.34
SPC97YHR172W COQ8P27697 501 aa6.69□□□□□ -1.34
SPC97YHR172W MAG2Q06436 670 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms