RNA–Protein interactions for RNA: YHR148W

IMP3, Transcript of Component of the SSU processome, yeastyeast

Gene IMP3, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IMP3YHR148W SOL3P38858 249 aa9.05□□□□□ -0.96
IMP3YHR148W PBS2P08018 668 aa9.03□□□□□ -0.96
IMP3YHR148W ABP1P15891 592 aaKnown RBP9.02□□□□□ -0.97
IMP3YHR148W YGR273CP53329 174 aa9.02□□□□□ -0.97
IMP3YHR148W DSF2P38213 736 aa9.01□□□□□ -0.97
IMP3YHR148W NST1P53935 1240 aa9.01□□□□□ -0.97
IMP3YHR148W VHR2P40041 505 aa9□□□□□ -0.97
IMP3YHR148W HTA1P04911 132 aaKnown RBP8.99□□□□□ -0.97
IMP3YHR148W HTA2P04912 132 aa8.99□□□□□ -0.97
IMP3YHR148W UBP14P38237 781 aaKnown RBP8.98□□□□□ -0.97
IMP3YHR148W FKH1P40466 484 aa8.97□□□□□ -0.97
IMP3YHR148W ULI1P43604 169 aa8.97□□□□□ -0.97
IMP3YHR148W YLR326WQ06170 240 aaKnown RBP8.97□□□□□ -0.97
IMP3YHR148W TRP5P00931 707 aaKnown RBP8.96□□□□□ -0.98
IMP3YHR148W AIR2Q12476 344 aaKnown RBP8.96□□□□□ -0.98
IMP3YHR148W EAP1P36041 632 aaKnown RBP8.95□□□□□ -0.98
IMP3YHR148W YDR090CQ03193 310 aa8.95□□□□□ -0.98
IMP3YHR148W LDB19Q12502 818 aa8.95□□□□□ -0.98
IMP3YHR148W LEO1P38439 464 aa8.93□□□□□ -0.98
IMP3YHR148W ILV3P39522 585 aaKnown RBP8.93□□□□□ -0.98
IMP3YHR148W IOC2Q12072 812 aa8.93□□□□□ -0.98
IMP3YHR148W COX6P00427 148 aa8.92□□□□□ -0.98
IMP3YHR148W KEX1P09620 729 aa8.92□□□□□ -0.98
IMP3YHR148W YEL023CP39992 682 aa8.91□□□□□ -0.98
IMP3YHR148W MAK21Q12176 1025 aaKnown RBP8.91□□□□□ -0.98
IMP3YHR148W MAM3Q12296 706 aa8.91□□□□□ -0.98
IMP3YHR148W MPH3P0CE00 602 aa8.9□□□□□ -0.98
IMP3YHR148W YJL171CP46992 396 aa8.9□□□□□ -0.98
IMP3YHR148W IES2P40154 320 aa8.89□□□□□ -0.99
IMP3YHR148W AI4P03878 556 aa8.88□□□□□ -0.99
IMP3YHR148W PCS60P38137 543 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
IMP3YHR148W RAD54P32863 898 aa8.85□□□□□ -0.99
IMP3YHR148W PTC4P38089 393 aa8.85□□□□□ -0.99
IMP3YHR148W NUP42P49686 430 aaKnown RBP8.85□□□□□ -0.99
IMP3YHR148W DAN4P47179 1161 aa8.84□□□□□ -0.99
IMP3YHR148W RPN1P38764 993 aaKnown RBP8.83□□□□□ -1
IMP3YHR148W JIP4Q03361 876 aa8.83□□□□□ -1
IMP3YHR148W DIT2P21595 489 aa8.82□□□□□ -1
IMP3YHR148W KIC1P38692 1080 aa8.82□□□□□ -1
IMP3YHR148W YNL035CP53962 389 aaKnown RBP8.8□□□□□ -1
IMP3YHR148W YNR021WP53723 404 aaKnown RBP8.79□□□□□ -1
IMP3YHR148W RTG1P32607 177 aa8.78□□□□□ -1
IMP3YHR148W SLI15P38283 698 aa8.78□□□□□ -1
IMP3YHR148W BMT6Q12291 365 aa8.77□□□□□ -1.01
IMP3YHR148W GLC3P32775 704 aa8.75□□□□□ -1.01
IMP3YHR148W ORC6P38826 435 aa8.74□□□□□ -1.01
IMP3YHR148W SEC61P32915 480 aa8.72□□□□□ -1.01
IMP3YHR148W NCR1Q12200 1170 aa8.72□□□□□ -1.01
IMP3YHR148W MID1P41821 548 aa8.71□□□□□ -1.02
IMP3YHR148W PML39Q03760 334 aa8.71□□□□□ -1.02
IMP3YHR148W CDC73Q06697 393 aa8.69□□□□□ -1.02
IMP3YHR148W PSE1P32337 1089 aaKnown RBP8.67□□□□□ -1.02
IMP3YHR148W KIN1P13185 1064 aa8.66□□□□□ -1.02
IMP3YHR148W GAP1P19145 602 aaPredicted RBP8.66□□□□□ -1.02
IMP3YHR148W AIM7Q12156 149 aa8.66□□□□□ -1.02
IMP3YHR148W ATF2P53296 535 aa8.63□□□□□ -1.03
IMP3YHR148W YDL129WQ07555 291 aa8.63□□□□□ -1.03
IMP3YHR148W MPC54Q08550 464 aa8.63□□□□□ -1.03
IMP3YHR148W RGR1P19263 1082 aa8.62□□□□□ -1.03
IMP3YHR148W TFG1P41895 735 aaPredicted RBP8.62□□□□□ -1.03
IMP3YHR148W MVP1P40959 511 aaKnown RBP8.61□□□□□ -1.03
IMP3YHR148W DPL1Q05567 589 aa8.61□□□□□ -1.03
IMP3YHR148W PEX29Q03370 554 aa8.6□□□□□ -1.03
IMP3YHR148W RPP1BP10622 106 aaKnown RBP8.59□□□□□ -1.03
IMP3YHR148W CSC1Q06538 782 aa8.59□□□□□ -1.03
IMP3YHR148W YDR344CQ05510 147 aa8.57□□□□□ -1.04
IMP3YHR148W SAP30P38429 201 aa8.56□□□□□ -1.04
IMP3YHR148W TFB4Q12004 338 aa8.55□□□□□ -1.04
IMP3YHR148W NMA111P53920 997 aa8.54□□□□□ -1.04
IMP3YHR148W YPR109WQ06104 294 aa8.54□□□□□ -1.04
IMP3YHR148W TEA1P47988 759 aa8.53□□□□□ -1.04
IMP3YHR148W PEX21P50091 288 aa8.52□□□□□ -1.05
IMP3YHR148W ISU2Q12056 156 aa8.52□□□□□ -1.05
IMP3YHR148W TUM1Q08686 304 aaKnown RBP8.51□□□□□ -1.05
IMP3YHR148W DMA2P53924 522 aa8.5□□□□□ -1.05
IMP3YHR148W CLB5P30283 435 aa8.49□□□□□ -1.05
IMP3YHR148W GUA1P38625 525 aaKnown RBP8.49□□□□□ -1.05
IMP3YHR148W ARH1P48360 493 aa8.49□□□□□ -1.05
IMP3YHR148W YRR1Q12172 810 aa8.49□□□□□ -1.05
IMP3YHR148W HAP5Q02516 242 aa8.47□□□□□ -1.05
IMP3YHR148W NIS1P53939 407 aa8.46□□□□□ -1.06
IMP3YHR148W PDR1P12383 1068 aa8.44□□□□□ -1.06
IMP3YHR148W CHL1P22516 861 aaPredicted RBP8.42□□□□□ -1.06
IMP3YHR148W KTR1P27810 393 aaKnown RBP8.42□□□□□ -1.06
IMP3YHR148W ELP4Q02884 456 aaKnown RBP8.42□□□□□ -1.06
IMP3YHR148W CSN12P47130 423 aa8.41□□□□□ -1.06
IMP3YHR148W FPK1P53739 893 aa8.41□□□□□ -1.06
IMP3YHR148W PRE3P38624 215 aa8.4□□□□□ -1.06
IMP3YHR148W TYW1Q08960 810 aaKnown RBP8.4□□□□□ -1.06
IMP3YHR148W SIT4P20604 311 aa8.39□□□□□ -1.07
IMP3YHR148W BNI4P53858 892 aa8.39□□□□□ -1.07
IMP3YHR148W TAF7Q05021 590 aa8.39□□□□□ -1.07
IMP3YHR148W NUD1P32336 851 aa8.38□□□□□ -1.07
IMP3YHR148W RAM1P22007 431 aa8.37□□□□□ -1.07
IMP3YHR148W SPT23P35210 1082 aa8.37□□□□□ -1.07
IMP3YHR148W HST2P53686 357 aa8.37□□□□□ -1.07
IMP3YHR148W HPC2Q01448 625 aa8.37□□□□□ -1.07
IMP3YHR148W YMR196WQ04336 1088 aa8.37□□□□□ -1.07
IMP3YHR148W SCJ1P25303 377 aa8.36□□□□□ -1.07
IMP3YHR148W BCK2P33306 851 aa8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms