RNA–Protein interactions for RNA: YHR083W

SAM35, Transcript of Component of the sorting and assembly machinery (SAM) complex, yeastyeast

Gene SAM35, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM35YHR083W TY1B-NL1Q12112 1755 aa14.04□□□□□ -0.16
SAM35YHR083W TY1B-GR1Q12141 1755 aa14.04□□□□□ -0.16
SAM35YHR083W TY1B-BLQ12490 1755 aa14.04□□□□□ -0.16
SAM35YHR083W IFH1P39520 1085 aa14.04□□□□□ -0.16
SAM35YHR083W NTE1Q04958 1679 aa14.03□□□□□ -0.16
SAM35YHR083W RPA190P10964 1664 aaKnown RBP14.01□□□□□ -0.17
SAM35YHR083W GEA2P39993 1459 aaKnown RBP14.01□□□□□ -0.17
SAM35YHR083W RTT106P40161 455 aa14□□□□□ -0.17
SAM35YHR083W NUP170P38181 1502 aa14□□□□□ -0.17
SAM35YHR083W RPO21P04050 1733 aaKnown RBP13.96□□□□□ -0.17
SAM35YHR083W DNF1P32660 1571 aa13.96□□□□□ -0.18
SAM35YHR083W CAT8P39113 1433 aa13.94□□□□□ -0.18
SAM35YHR083W NUP159P40477 1460 aa13.91□□□□□ -0.18
SAM35YHR083W MET5P47169 1442 aa13.89□□□□□ -0.19
SAM35YHR083W IRC20Q06554 1556 aa13.88□□□□□ -0.19
SAM35YHR083W VPS15P22219 1454 aa13.84□□□□□ -0.19
SAM35YHR083W TY3B-GQ99315 1547 aa13.84□□□□□ -0.19
SAM35YHR083W YBT1P32386 1661 aa13.82□□□□□ -0.2
SAM35YHR083W PDR12Q02785 1511 aa13.8□□□□□ -0.2
SAM35YHR083W MET10P39692 1035 aa13.79□□□□□ -0.2
SAM35YHR083W SSM4P40318 1319 aa13.77□□□□□ -0.21
SAM35YHR083W SRB8P25648 1427 aa13.72□□□□□ -0.21
SAM35YHR083W GDB1Q06625 1536 aa13.71□□□□□ -0.21
SAM35YHR083W PDR10P51533 1564 aa13.7□□□□□ -0.22
SAM35YHR083W NUP157P40064 1391 aaKnown RBP13.67□□□□□ -0.22
SAM35YHR083W ARO1P08566 1588 aaKnown RBP13.66□□□□□ -0.22
SAM35YHR083W SPO14P36126 1683 aa13.66□□□□□ -0.22
SAM35YHR083W YRF1-1P0CX20 1796 aa13.66□□□□□ -0.22
SAM35YHR083W YRF1-5P0CX21 1796 aa13.66□□□□□ -0.22
SAM35YHR083W YRF1-8P0CX22 1796 aa13.66□□□□□ -0.22
SAM35YHR083W BUD3P25558 1636 aa13.64□□□□□ -0.23
SAM35YHR083W MMS1Q06211 1407 aa13.63□□□□□ -0.23
SAM35YHR083W CKB1P43639 278 aa13.59□□□□□ -0.23
SAM35YHR083W LTE1P07866 1435 aa13.56□□□□□ -0.24
SAM35YHR083W IQG1Q12280 1495 aa13.56□□□□□ -0.24
SAM35YHR083W GCN2P15442 1659 aa13.53□□□□□ -0.24
SAM35YHR083W BUD21Q08492 214 aaPredicted RBP13.51□□□□□ -0.25
SAM35YHR083W TRM3Q07527 1436 aa13.47□□□□□ -0.25
SAM35YHR083W YSP2Q06681 1438 aa13.47□□□□□ -0.25
SAM35YHR083W BNR1P40450 1375 aa13.42□□□□□ -0.26
SAM35YHR083W DRS2P39524 1355 aa13.41□□□□□ -0.26
SAM35YHR083W DOP1Q03921 1698 aa13.38□□□□□ -0.27
SAM35YHR083W NOP7P53261 605 aaKnown RBP13.38□□□□□ -0.27
SAM35YHR083W SEC7P11075 2009 aaKnown RBP13.37□□□□□ -0.27
SAM35YHR083W PAF1P38351 445 aa13.37□□□□□ -0.27
SAM35YHR083W POL5P39985 1022 aaKnown RBP13.34□□□□□ -0.27
SAM35YHR083W PDR5P33302 1511 aaKnown RBP13.32□□□□□ -0.28
SAM35YHR083W CHC1P22137 1653 aaKnown RBP13.31□□□□□ -0.28
SAM35YHR083W YOR093CQ12275 1648 aa13.28□□□□□ -0.28
SAM35YHR083W BFR2Q06631 534 aaKnown RBP13.22□□□□□ -0.29
SAM35YHR083W DNF2Q12675 1612 aa13.18□□□□□ -0.3
SAM35YHR083W SCT1P32784 759 aa13.18□□□□□ -0.3
SAM35YHR083W URN1Q06525 465 aaKnown RBP13.18□□□□□ -0.3
SAM35YHR083W SEC3P33332 1336 aaKnown RBP13.17□□□□□ -0.3
SAM35YHR083W NUP188P52593 1655 aaKnown RBP13.15□□□□□ -0.3
SAM35YHR083W RAV1P47104 1357 aa13.15□□□□□ -0.3
SAM35YHR083W IML1P47170 1584 aa13.11□□□□□ -0.31
SAM35YHR083W RTC1Q08281 1341 aa13.11□□□□□ -0.31
SAM35YHR083W ITT1Q04638 464 aa13.09□□□□□ -0.31
SAM35YHR083W VMR1P38735 1592 aa13.08□□□□□ -0.32
SAM35YHR083W BNI1P41832 1953 aa13.07□□□□□ -0.32
SAM35YHR083W ESL2P36168 1195 aa13.01□□□□□ -0.33
SAM35YHR083W MHP1P43638 1398 aa13.01□□□□□ -0.33
SAM35YHR083W TY3B-IQ7LHG5 1498 aaKnown RBP13□□□□□ -0.33
SAM35YHR083W HAP1P0CE41 1502 aa12.98□□□□□ -0.33
SAM35YHR083W ENP1P38333 483 aaKnown RBP12.97□□□□□ -0.33
SAM35YHR083W IPL1P38991 367 aa12.96□□□□□ -0.33
SAM35YHR083W PDR11P40550 1411 aa12.96□□□□□ -0.34
SAM35YHR083W YAP3P38749 330 aa12.93□□□□□ -0.34
SAM35YHR083W NAP1P25293 417 aaKnown RBP12.9□□□□□ -0.34
SAM35YHR083W TAF5P38129 798 aa12.9□□□□□ -0.34
SAM35YHR083W YLR419WQ06698 1435 aaKnown RBP12.86□□□□□ -0.35
SAM35YHR083W KIP3P53086 805 aaKnown RBP12.84□□□□□ -0.35
SAM35YHR083W SPT7P35177 1332 aa12.84□□□□□ -0.35
SAM35YHR083W NUP192P47054 1683 aa12.83□□□□□ -0.35
SAM35YHR083W TYS1P36421 394 aaKnown RBP12.82□□□□□ -0.36
SAM35YHR083W NSR1P27476 414 aaKnown RBP RIP-Chip data12.8□□□□□ -0.36 RIP-Chip
SAM35YHR083W ORC1P54784 914 aaPredicted RBP12.8□□□□□ -0.36
SAM35YHR083W DNF3Q12674 1656 aa12.78□□□□□ -0.36
SAM35YHR083W ALD4P46367 519 aaKnown RBP12.78□□□□□ -0.36
SAM35YHR083W BCK1Q01389 1478 aa12.78□□□□□ -0.36
SAM35YHR083W SPE2P21182 396 aa12.77□□□□□ -0.37
SAM35YHR083W PDS5Q04264 1277 aa12.77□□□□□ -0.37
SAM35YHR083W MRX12P47084 519 aa12.71□□□□□ -0.37
SAM35YHR083W TAF8Q03750 510 aa12.71□□□□□ -0.37
SAM35YHR083W CFT1Q06632 1357 aaKnown RBP12.7□□□□□ -0.38
SAM35YHR083W RAD9P14737 1309 aa12.69□□□□□ -0.38
SAM35YHR083W PSD2P53037 1138 aaKnown RBP12.67□□□□□ -0.38
SAM35YHR083W CAB1Q04430 367 aa12.65□□□□□ -0.38
SAM35YHR083W ABP1P15891 592 aaKnown RBP12.64□□□□□ -0.39
SAM35YHR083W MAK10Q02197 733 aa12.63□□□□□ -0.39
SAM35YHR083W MLP1Q02455 1875 aaKnown RBP12.63□□□□□ -0.39
SAM35YHR083W CHZ1P40019 153 aaPredicted RBP12.62□□□□□ -0.39
SAM35YHR083W LEU3P08638 886 aa12.61□□□□□ -0.39
SAM35YHR083W TY1B-NL2Q99337 1749 aaKnown RBP12.59□□□□□ -0.39
SAM35YHR083W KRE5P22023 1365 aa12.57□□□□□ -0.4
SAM35YHR083W FKH1P40466 484 aa12.56□□□□□ -0.4
SAM35YHR083W NOP2P40991 618 aaKnown RBP12.56□□□□□ -0.4
SAM35YHR083W RIA1P53893 1110 aa12.56□□□□□ -0.4
SAM35YHR083W IOC4Q04213 475 aa12.56□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms