RNA–Protein interactions for RNA: YHL009W-B

YHL009W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHL009W-B, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-BYHL009W-B PUS1Q12211 544 aaKnown RBP0.09□□□□□ -2.4
YHL009W-BYHL009W-B DAN4P47179 1161 aa0.08□□□□□ -2.4
YHL009W-BYHL009W-B SBP1P10080 294 aaKnown RBP0.07□□□□□ -2.4
YHL009W-BYHL009W-B PML39Q03760 334 aa0.07□□□□□ -2.4
YHL009W-BYHL009W-B TRK1P12685 1235 aa0.07□□□□□ -2.4
YHL009W-BYHL009W-B YOL036WQ08206 761 aa0.06□□□□□ -2.4
YHL009W-BYHL009W-B CHL1P22516 861 aaPredicted RBP0.06□□□□□ -2.4
YHL009W-BYHL009W-B SPB4P25808 606 aaPredicted RBP0.05□□□□□ -2.4
YHL009W-BYHL009W-B THI12P42883 340 aa0.05□□□□□ -2.4
YHL009W-BYHL009W-B THI5P43534 340 aa0.05□□□□□ -2.4
YHL009W-BYHL009W-B THI11P47183 340 aa0.05□□□□□ -2.4
YHL009W-BYHL009W-B THI13Q07748 340 aa0.05□□□□□ -2.4
YHL009W-BYHL009W-B PNS1Q12412 539 aa0.05□□□□□ -2.4
YHL009W-BYHL009W-B SRF1Q12516 437 aa0.05□□□□□ -2.4
YHL009W-BYHL009W-B PEX21P50091 288 aa0.04□□□□□ -2.4
YHL009W-BYHL009W-B LSB3P43603 459 aaKnown RBP0.04□□□□□ -2.4
YHL009W-BYHL009W-B PRE3P38624 215 aa0.04□□□□□ -2.4
YHL009W-BYHL009W-B DRS1P32892 752 aaKnown RBP0.04□□□□□ -2.4
YHL009W-BYHL009W-B GCD11P32481 527 aaKnown RBP0.03□□□□□ -2.4
YHL009W-BYHL009W-B MDJ1P35191 511 aa0.03□□□□□ -2.4
YHL009W-BYHL009W-B GYP1Q08484 637 aa0.03□□□□□ -2.4
YHL009W-BYHL009W-B YAP5P40574 245 aa0.03□□□□□ -2.4
YHL009W-BYHL009W-B YDL129WQ07555 291 aa0.03□□□□□ -2.4
YHL009W-BYHL009W-B PHM7Q12252 991 aa0.03□□□□□ -2.4
YHL009W-BYHL009W-B YPR204WQ08995 1032 aa0.03□□□□□ -2.41
YHL009W-BYHL009W-B SNM1P40993 198 aa0.02□□□□□ -2.41
YHL009W-BYHL009W-B RCR1P38212 213 aa0.02□□□□□ -2.41
YHL009W-BYHL009W-B YLR326WQ06170 240 aaKnown RBP0.02□□□□□ -2.41
YHL009W-BYHL009W-B MRM1P25270 412 aa0.02□□□□□ -2.41
YHL009W-BYHL009W-B BFR2Q06631 534 aaKnown RBP0.02□□□□□ -2.41
YHL009W-BYHL009W-B PEX2P32800 271 aa0.01□□□□□ -2.41
YHL009W-BYHL009W-B TRM1P15565 570 aaKnown RBP0.01□□□□□ -2.41
YHL009W-BYHL009W-B NOP1P15646 327 aaKnown RBP0.01□□□□□ -2.41
YHL009W-BYHL009W-B DBP1P24784 617 aaKnown RBP0.01□□□□□ -2.41
YHL009W-BYHL009W-B YNR063WP53749 607 aa0.01□□□□□ -2.41
YHL009W-BYHL009W-B YNL035CP53962 389 aaKnown RBP0.01□□□□□ -2.41
YHL009W-BYHL009W-B YMR196WQ04336 1088 aa0.01□□□□□ -2.41
YHL009W-BYHL009W-B YPR015CQ12531 247 aa0.01□□□□□ -2.41
YHL009W-BYHL009W-B KIP2P28743 706 aa0.01□□□□□ -2.41
YHL009W-BYHL009W-B YPT53P36019 220 aa0.01□□□□□ -2.41
YHL009W-BYHL009W-B ICP55P40051 511 aa0□□□□□ -2.41
YHL009W-BYHL009W-B ALA1P40825 983 aaKnown RBP0□□□□□ -2.41
YHL009W-BYHL009W-B RPL34BP40525 121 aaKnown RBP0□□□□□ -2.41
YHL009W-BYHL009W-B RSE1Q04693 1361 aaKnown RBP0□□□□□ -2.41
YHL009W-BYHL009W-B BPT1P14772 1559 aa0□□□□□ -2.41
YHL009W-BYHL009W-B EAP1P36041 632 aaKnown RBP0□□□□□ -2.41
YHL009W-BYHL009W-B NPL4P33755 580 aa-0□□□□□ -2.41
YHL009W-BYHL009W-B PUS5Q06244 254 aa-0□□□□□ -2.41
YHL009W-BYHL009W-B DED1P06634 604 aaKnown RBP-0.01□□□□□ -2.41
YHL009W-BYHL009W-B DAT1P13483 248 aaKnown RBP-0.01□□□□□ -2.41
YHL009W-BYHL009W-B PEP7P32609 515 aa-0.01□□□□□ -2.41
YHL009W-BYHL009W-B KIC1P38692 1080 aa-0.01□□□□□ -2.41
YHL009W-BYHL009W-B CAF120P53836 1060 aa-0.01□□□□□ -2.41
YHL009W-BYHL009W-B YMR206WQ03695 313 aa-0.01□□□□□ -2.41
YHL009W-BYHL009W-B PDR1P12383 1068 aa-0.01□□□□□ -2.41
YHL009W-BYHL009W-B YEL023CP39992 682 aa-0.01□□□□□ -2.41
YHL009W-BYHL009W-B MST1P07236 462 aa-0.02□□□□□ -2.41
YHL009W-BYHL009W-B YPL034WQ03083 165 aa-0.02□□□□□ -2.41
YHL009W-BYHL009W-B BRE2P43132 505 aa-0.02□□□□□ -2.41
YHL009W-BYHL009W-B YPR196WQ06595 470 aa-0.02□□□□□ -2.41
YHL009W-BYHL009W-B YOR352WQ08816 343 aa-0.02□□□□□ -2.41
YHL009W-BYHL009W-B YJL181WP46987 611 aa-0.02□□□□□ -2.41
YHL009W-BYHL009W-B ATG14P38270 344 aa-0.02□□□□□ -2.41
YHL009W-BYHL009W-B STS1P38637 319 aa-0.02□□□□□ -2.41
YHL009W-BYHL009W-B MAC1P35192 417 aa-0.03□□□□□ -2.41
YHL009W-BYHL009W-B MGA2P40578 1113 aa-0.03□□□□□ -2.41
YHL009W-BYHL009W-B TBF1Q02457 562 aa-0.03□□□□□ -2.41
YHL009W-BYHL009W-B CSF1Q12150 2958 aa-0.03□□□□□ -2.41
YHL009W-BYHL009W-B SEC61P32915 480 aa-0.03□□□□□ -2.41
YHL009W-BYHL009W-B SAF1P38352 637 aa-0.04□□□□□ -2.42
YHL009W-BYHL009W-B VHR2P40041 505 aa-0.04□□□□□ -2.42
YHL009W-BYHL009W-B APP1P53933 587 aa-0.04□□□□□ -2.42
YHL009W-BYHL009W-B NMD3P38861 518 aaKnown RBP-0.04□□□□□ -2.42
YHL009W-BYHL009W-B SDH2P21801 266 aa-0.04□□□□□ -2.42
YHL009W-BYHL009W-B MET22P32179 357 aa-0.04□□□□□ -2.42
YHL009W-BYHL009W-B PTC3P34221 468 aaKnown RBP-0.04□□□□□ -2.42
YHL009W-BYHL009W-B YGR035CP53222 116 aa-0.04□□□□□ -2.42
YHL009W-BYHL009W-B FOX2Q02207 900 aaKnown RBP-0.04□□□□□ -2.42
YHL009W-BYHL009W-B TRK2P28584 889 aa-0.05□□□□□ -2.42
YHL009W-BYHL009W-B CST6P40535 587 aa-0.05□□□□□ -2.42
YHL009W-BYHL009W-B TAD3Q9URQ3 322 aa-0.05□□□□□ -2.42
YHL009W-BYHL009W-B NAB2P32505 525 aaKnown RBP RIP-Chip data-0.05□□□□□ -2.42not detected
YHL009W-BYHL009W-B SPT21P35209 758 aa-0.05□□□□□ -2.42
YHL009W-BYHL009W-B YMR074CQ04773 145 aa-0.05□□□□□ -2.42
YHL009W-BYHL009W-B DLD1P32891 587 aa-0.06□□□□□ -2.42
YHL009W-BYHL009W-B SEA4P38164 1038 aa-0.06□□□□□ -2.42
YHL009W-BYHL009W-B MSC7P38694 644 aa-0.06□□□□□ -2.42
YHL009W-BYHL009W-B GYP5Q12344 894 aa-0.06□□□□□ -2.42
YHL009W-BYHL009W-B VMA1P17255 1071 aaKnown RBP-0.06□□□□□ -2.42
YHL009W-BYHL009W-B ISF1P32488 338 aa-0.06□□□□□ -2.42
YHL009W-BYHL009W-B ILV3P39522 585 aaKnown RBP-0.06□□□□□ -2.42
YHL009W-BYHL009W-B CWC24P53769 259 aa-0.06□□□□□ -2.42
YHL009W-BYHL009W-B ENV9Q08651 330 aa-0.06□□□□□ -2.42
YHL009W-BYHL009W-B AI2P03876 854 aa-0.06□□□□□ -2.42
YHL009W-BYHL009W-B ATH1P48016 1211 aa-0.06□□□□□ -2.42
YHL009W-BYHL009W-B YDR444WQ04093 687 aa-0.06□□□□□ -2.42
YHL009W-BYHL009W-B SEC23P15303 768 aaKnown RBP-0.07□□□□□ -2.42
YHL009W-BYHL009W-B ARG8P18544 423 aa-0.07□□□□□ -2.42
YHL009W-BYHL009W-B VPS70P47161 811 aa-0.07□□□□□ -2.42
YHL009W-BYHL009W-B SCJ1P25303 377 aa-0.07□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms