RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A NOP53Q12080 455 aaKnown RBP8.77□□□□□ -1.01
EFG1YGR271C-A DCW1P36091 449 aa8.74□□□□□ -1.01
EFG1YGR271C-A GUT1P32190 709 aa8.73□□□□□ -1.01
EFG1YGR271C-A YJL171CP46992 396 aa8.73□□□□□ -1.01
EFG1YGR271C-A NCR1Q12200 1170 aa8.72□□□□□ -1.01
EFG1YGR271C-A YEL023CP39992 682 aa8.71□□□□□ -1.02
EFG1YGR271C-A BMT6Q12291 365 aa8.71□□□□□ -1.02
EFG1YGR271C-A PTC4P38089 393 aa8.7□□□□□ -1.02
EFG1YGR271C-A ATH1P48016 1211 aa8.7□□□□□ -1.02
EFG1YGR271C-A NST1P53935 1240 aa8.7□□□□□ -1.02
EFG1YGR271C-A SOL3P38858 249 aa8.64□□□□□ -1.03
EFG1YGR271C-A YDL129WQ07555 291 aa8.62□□□□□ -1.03
EFG1YGR271C-A TFG1P41895 735 aaPredicted RBP8.6□□□□□ -1.03
EFG1YGR271C-A AI4P03878 556 aa8.58□□□□□ -1.04
EFG1YGR271C-A SET1P38827 1080 aaKnown RBP8.58□□□□□ -1.04
EFG1YGR271C-A MPH3P0CE00 602 aa8.57□□□□□ -1.04
EFG1YGR271C-A YGR273CP53329 174 aa8.55□□□□□ -1.04
EFG1YGR271C-A SAP30P38429 201 aa8.54□□□□□ -1.04
EFG1YGR271C-A ILV3P39522 585 aaKnown RBP8.54□□□□□ -1.04
EFG1YGR271C-A PML39Q03760 334 aa8.5□□□□□ -1.05
EFG1YGR271C-A YPR148CQ06523 435 aa8.47□□□□□ -1.05
EFG1YGR271C-A CHL1P22516 861 aaPredicted RBP8.46□□□□□ -1.06
EFG1YGR271C-A PRE3P38624 215 aa8.46□□□□□ -1.06
EFG1YGR271C-A IFH1P39520 1085 aa8.45□□□□□ -1.06
EFG1YGR271C-A YDR344CQ05510 147 aa8.43□□□□□ -1.06
EFG1YGR271C-A MID1P41821 548 aa8.42□□□□□ -1.06
EFG1YGR271C-A ARH1P48360 493 aa8.41□□□□□ -1.06
EFG1YGR271C-A KEX1P09620 729 aa8.39□□□□□ -1.07
EFG1YGR271C-A UBP14P38237 781 aaKnown RBP8.39□□□□□ -1.07
EFG1YGR271C-A SLI15P38283 698 aa8.38□□□□□ -1.07
EFG1YGR271C-A YLR326WQ06170 240 aaKnown RBP8.38□□□□□ -1.07
EFG1YGR271C-A MPC54Q08550 464 aa8.35□□□□□ -1.07
EFG1YGR271C-A BCK2P33306 851 aa8.33□□□□□ -1.08
EFG1YGR271C-A ELP4Q02884 456 aaKnown RBP8.32□□□□□ -1.08
EFG1YGR271C-A PEX29Q03370 554 aa8.32□□□□□ -1.08
EFG1YGR271C-A VHR2P40041 505 aa8.31□□□□□ -1.08
EFG1YGR271C-A HAP5Q02516 242 aa8.3□□□□□ -1.08
EFG1YGR271C-A BNI4P53858 892 aa8.29□□□□□ -1.08
EFG1YGR271C-A YDR090CQ03193 310 aa8.29□□□□□ -1.08
EFG1YGR271C-A SPT23P35210 1082 aa8.28□□□□□ -1.08
EFG1YGR271C-A PCS60P38137 543 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
EFG1YGR271C-A DPL1Q05567 589 aa8.28□□□□□ -1.08
EFG1YGR271C-A RAD54P32863 898 aa8.27□□□□□ -1.09
EFG1YGR271C-A REF2P42073 533 aaPredicted RBP8.26□□□□□ -1.09
EFG1YGR271C-A NMA111P53920 997 aa8.24□□□□□ -1.09
EFG1YGR271C-A VPS70P47161 811 aa8.23□□□□□ -1.09
EFG1YGR271C-A DMA1P38823 416 aa8.22□□□□□ -1.09
EFG1YGR271C-A YML082WQ04533 649 aaKnown RBP8.22□□□□□ -1.09
EFG1YGR271C-A SAS10Q12136 610 aaPredicted RBP8.22□□□□□ -1.09
EFG1YGR271C-A CDC73Q06697 393 aa8.21□□□□□ -1.1
EFG1YGR271C-A ISU2Q12056 156 aa8.21□□□□□ -1.1
EFG1YGR271C-A VRP1P37370 817 aa8.2□□□□□ -1.1
EFG1YGR271C-A XDJ1P39102 459 aa8.2□□□□□ -1.1
EFG1YGR271C-A MAK21Q12176 1025 aaKnown RBP8.2□□□□□ -1.1
EFG1YGR271C-A GAP1P19145 602 aaPredicted RBP8.18□□□□□ -1.1
EFG1YGR271C-A PTC2P39966 464 aaKnown RBP8.17□□□□□ -1.1
EFG1YGR271C-A COX6P00427 148 aa8.16□□□□□ -1.1
EFG1YGR271C-A RAM1P22007 431 aa8.16□□□□□ -1.1
EFG1YGR271C-A RPP1BP10622 106 aaKnown RBP8.15□□□□□ -1.1
EFG1YGR271C-A KIC1P38692 1080 aa8.15□□□□□ -1.1
EFG1YGR271C-A CKB1P43639 278 aa8.15□□□□□ -1.1
EFG1YGR271C-A ORC6P38826 435 aa8.13□□□□□ -1.11
EFG1YGR271C-A YPR015CQ12531 247 aa8.11□□□□□ -1.11
EFG1YGR271C-A CSC1Q06538 782 aa8.09□□□□□ -1.11
EFG1YGR271C-A TFB4Q12004 338 aa8.08□□□□□ -1.12
EFG1YGR271C-A PBS2P08018 668 aa8.05□□□□□ -1.12
EFG1YGR271C-A PDR1P12383 1068 aa8.05□□□□□ -1.12
EFG1YGR271C-A DSF2P38213 736 aa8.03□□□□□ -1.12
EFG1YGR271C-A MVP1P40959 511 aaKnown RBP7.99□□□□□ -1.13
EFG1YGR271C-A PEX21P50091 288 aa7.99□□□□□ -1.13
EFG1YGR271C-A YRR1Q12172 810 aa7.99□□□□□ -1.13
EFG1YGR271C-A RGR1P19263 1082 aa7.97□□□□□ -1.13
EFG1YGR271C-A DPS1P04802 557 aaKnown RBP7.96□□□□□ -1.14
EFG1YGR271C-A TUM1Q08686 304 aaKnown RBP7.96□□□□□ -1.14
EFG1YGR271C-A PSE1P32337 1089 aaKnown RBP7.95□□□□□ -1.14
EFG1YGR271C-A STR2P47164 639 aa7.95□□□□□ -1.14
EFG1YGR271C-A SAS4Q04003 481 aa7.95□□□□□ -1.14
EFG1YGR271C-A MAM3Q12296 706 aa7.95□□□□□ -1.14
EFG1YGR271C-A NUD1P32336 851 aa7.94□□□□□ -1.14
EFG1YGR271C-A BUD20Q08004 166 aaPredicted RBP7.94□□□□□ -1.14
EFG1YGR271C-A SDH2P21801 266 aa7.92□□□□□ -1.14
EFG1YGR271C-A ISM1P48526 1002 aa7.92□□□□□ -1.14
EFG1YGR271C-A NUP42P49686 430 aaKnown RBP7.91□□□□□ -1.14
EFG1YGR271C-A RQC2Q12532 1038 aaKnown RBP7.91□□□□□ -1.14
EFG1YGR271C-A IES2P40154 320 aa7.9□□□□□ -1.14
EFG1YGR271C-A YPR109WQ06104 294 aa7.9□□□□□ -1.14
EFG1YGR271C-A GYP1Q08484 637 aa7.9□□□□□ -1.14
EFG1YGR271C-A TY1A-DR4O74302 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A PRT1P06103 763 aaKnown RBP7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-HP0C2I4 478 aaKnown RBP7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-AP0CX57 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-PR1P0CX58 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-ORP0CX59 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-PR2P0CX60 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-DR5P0CX65 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-ER2P0CX66 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-GR3P0CX67 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-LR1P0CX68 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-MR2P0CX69 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-JR2P47099 440 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms