RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C SEC61P32915 480 aa8.91□□□□□ -0.98
PRP38YGR075C DAN4P47179 1161 aa8.91□□□□□ -0.98
PRP38YGR075C JIP4Q03361 876 aa8.91□□□□□ -0.98
PRP38YGR075C YEL023CP39992 682 aa8.9□□□□□ -0.98
PRP38YGR075C YJL171CP46992 396 aa8.89□□□□□ -0.99
PRP38YGR075C NOP53Q12080 455 aaKnown RBP8.89□□□□□ -0.99
PRP38YGR075C NCR1Q12200 1170 aa8.88□□□□□ -0.99
PRP38YGR075C PTC4P38089 393 aa8.85□□□□□ -0.99
PRP38YGR075C SET1P38827 1080 aaKnown RBP8.85□□□□□ -0.99
PRP38YGR075C NST1P53935 1240 aa8.85□□□□□ -0.99
PRP38YGR075C BMT6Q12291 365 aa8.85□□□□□ -0.99
PRP38YGR075C SOL3P38858 249 aa8.83□□□□□ -1
PRP38YGR075C TFG1P41895 735 aaPredicted RBP8.78□□□□□ -1
PRP38YGR075C YDL129WQ07555 291 aa8.76□□□□□ -1.01
PRP38YGR075C YGR273CP53329 174 aa8.75□□□□□ -1.01
PRP38YGR075C SAP30P38429 201 aa8.74□□□□□ -1.01
PRP38YGR075C ILV3P39522 585 aaKnown RBP8.74□□□□□ -1.01
PRP38YGR075C MPH3P0CE00 602 aa8.73□□□□□ -1.01
PRP38YGR075C AI4P03878 556 aa8.72□□□□□ -1.01
PRP38YGR075C PML39Q03760 334 aa8.71□□□□□ -1.02
PRP38YGR075C MID1P41821 548 aa8.65□□□□□ -1.02
PRP38YGR075C YPR148CQ06523 435 aa8.65□□□□□ -1.02
PRP38YGR075C DMA1P38823 416 aa8.64□□□□□ -1.03
PRP38YGR075C IFH1P39520 1085 aa8.64□□□□□ -1.03
PRP38YGR075C YDR344CQ05510 147 aa8.64□□□□□ -1.03
PRP38YGR075C KEX1P09620 729 aa8.61□□□□□ -1.03
PRP38YGR075C YLR326WQ06170 240 aaKnown RBP8.6□□□□□ -1.03
PRP38YGR075C UBP14P38237 781 aaKnown RBP8.59□□□□□ -1.03
PRP38YGR075C PRE3P38624 215 aa8.59□□□□□ -1.03
PRP38YGR075C VHR2P40041 505 aa8.58□□□□□ -1.04
PRP38YGR075C SLI15P38283 698 aa8.57□□□□□ -1.04
PRP38YGR075C CHL1P22516 861 aaPredicted RBP8.56□□□□□ -1.04
PRP38YGR075C PEX29Q03370 554 aa8.55□□□□□ -1.04
PRP38YGR075C ARH1P48360 493 aa8.54□□□□□ -1.04
PRP38YGR075C MPC54Q08550 464 aa8.54□□□□□ -1.04
PRP38YGR075C VPS70P47161 811 aa8.53□□□□□ -1.04
PRP38YGR075C ELP4Q02884 456 aaKnown RBP8.52□□□□□ -1.05
PRP38YGR075C PCS60P38137 543 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
PRP38YGR075C RAD54P32863 898 aa8.5□□□□□ -1.05
PRP38YGR075C YDR090CQ03193 310 aa8.5□□□□□ -1.05
PRP38YGR075C REF2P42073 533 aaPredicted RBP8.49□□□□□ -1.05
PRP38YGR075C HAP5Q02516 242 aa8.47□□□□□ -1.05
PRP38YGR075C DPL1Q05567 589 aa8.46□□□□□ -1.06
PRP38YGR075C SAS10Q12136 610 aaPredicted RBP8.45□□□□□ -1.06
PRP38YGR075C BCK2P33306 851 aa8.44□□□□□ -1.06
PRP38YGR075C CDC73Q06697 393 aa8.44□□□□□ -1.06
PRP38YGR075C NMA111P53920 997 aa8.43□□□□□ -1.06
PRP38YGR075C SPT23P35210 1082 aa8.42□□□□□ -1.06
PRP38YGR075C BNI4P53858 892 aa8.41□□□□□ -1.06
PRP38YGR075C KIC1P38692 1080 aa8.39□□□□□ -1.07
PRP38YGR075C VRP1P37370 817 aa8.37□□□□□ -1.07
PRP38YGR075C CKB1P43639 278 aa8.37□□□□□ -1.07
PRP38YGR075C ISU2Q12056 156 aa8.37□□□□□ -1.07
PRP38YGR075C MAK21Q12176 1025 aaKnown RBP8.37□□□□□ -1.07
PRP38YGR075C COX6P00427 148 aa8.36□□□□□ -1.07
PRP38YGR075C PTC2P39966 464 aaKnown RBP8.34□□□□□ -1.07
PRP38YGR075C PBS2P08018 668 aa8.32□□□□□ -1.08
PRP38YGR075C RPP1BP10622 106 aaKnown RBP8.32□□□□□ -1.08
PRP38YGR075C GAP1P19145 602 aaPredicted RBP8.32□□□□□ -1.08
PRP38YGR075C ORC6P38826 435 aa8.32□□□□□ -1.08
PRP38YGR075C YML082WQ04533 649 aaKnown RBP8.32□□□□□ -1.08
PRP38YGR075C RAM1P22007 431 aa8.3□□□□□ -1.08
PRP38YGR075C YPR015CQ12531 247 aa8.29□□□□□ -1.08
PRP38YGR075C XDJ1P39102 459 aa8.28□□□□□ -1.08
PRP38YGR075C RQC2Q12532 1038 aaKnown RBP8.28□□□□□ -1.08
PRP38YGR075C PDR1P12383 1068 aa8.27□□□□□ -1.09
PRP38YGR075C CSC1Q06538 782 aa8.26□□□□□ -1.09
PRP38YGR075C DSF2P38213 736 aa8.24□□□□□ -1.09
PRP38YGR075C TFB4Q12004 338 aa8.24□□□□□ -1.09
PRP38YGR075C PEX21P50091 288 aa8.23□□□□□ -1.09
PRP38YGR075C YRR1Q12172 810 aa8.22□□□□□ -1.09
PRP38YGR075C MAM3Q12296 706 aa8.22□□□□□ -1.09
PRP38YGR075C MVP1P40959 511 aaKnown RBP8.2□□□□□ -1.1
PRP38YGR075C IES2P40154 320 aa8.19□□□□□ -1.1
PRP38YGR075C TUM1Q08686 304 aaKnown RBP8.19□□□□□ -1.1
PRP38YGR075C RGR1P19263 1082 aa8.18□□□□□ -1.1
PRP38YGR075C SPB4P25808 606 aaPredicted RBP8.16□□□□□ -1.1
PRP38YGR075C NUD1P32336 851 aa8.14□□□□□ -1.11
PRP38YGR075C STR2P47164 639 aa8.14□□□□□ -1.11
PRP38YGR075C NUP42P49686 430 aaKnown RBP8.14□□□□□ -1.11
PRP38YGR075C PSE1P32337 1089 aaKnown RBP8.13□□□□□ -1.11
PRP38YGR075C ISM1P48526 1002 aa8.12□□□□□ -1.11
PRP38YGR075C YPR109WQ06104 294 aa8.12□□□□□ -1.11
PRP38YGR075C BUD20Q08004 166 aaPredicted RBP8.1□□□□□ -1.11
PRP38YGR075C GYP1Q08484 637 aa8.1□□□□□ -1.11
PRP38YGR075C DPS1P04802 557 aaKnown RBP8.09□□□□□ -1.11
PRP38YGR075C DIT2P21595 489 aa8.07□□□□□ -1.12
PRP38YGR075C SDH2P21801 266 aa8.06□□□□□ -1.12
PRP38YGR075C SAS4Q04003 481 aa8.06□□□□□ -1.12
PRP38YGR075C TY1A-DR4O74302 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-HP0C2I4 478 aaKnown RBP8.05□□□□□ -1.12
PRP38YGR075C TY1A-AP0CX57 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-PR1P0CX58 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-ORP0CX59 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-PR2P0CX60 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-DR5P0CX65 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-ER2P0CX66 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-GR3P0CX67 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-LR1P0CX68 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-MR2P0CX69 440 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms