RNA–Protein interactions for RNA: YGR058W

PEF1, Transcript of Penta-EF-hand protein, yeastyeast

Gene PEF1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEF1YGR058W YEL023CP39992 682 aa9.9□□□□□ -0.82
PEF1YGR058W BMT6Q12291 365 aa9.9□□□□□ -0.82
PEF1YGR058W ATH1P48016 1211 aa9.88□□□□□ -0.83
PEF1YGR058W SOL3P38858 249 aa9.87□□□□□ -0.83
PEF1YGR058W SEC61P32915 480 aa9.86□□□□□ -0.83
PEF1YGR058W ABP1P15891 592 aaKnown RBP9.83□□□□□ -0.84
PEF1YGR058W YDR344CQ05510 147 aa9.83□□□□□ -0.84
PEF1YGR058W GUT1P32190 709 aa9.82□□□□□ -0.84
PEF1YGR058W NST1P53935 1240 aa9.82□□□□□ -0.84
PEF1YGR058W JIP4Q03361 876 aa9.81□□□□□ -0.84
PEF1YGR058W PTC4P38089 393 aa9.8□□□□□ -0.84
PEF1YGR058W SAP30P38429 201 aa9.8□□□□□ -0.84
PEF1YGR058W ILV3P39522 585 aaKnown RBP9.78□□□□□ -0.84
PEF1YGR058W PML39Q03760 334 aa9.74□□□□□ -0.85
PEF1YGR058W SET1P38827 1080 aaKnown RBP9.73□□□□□ -0.85
PEF1YGR058W MID1P41821 548 aa9.73□□□□□ -0.85
PEF1YGR058W TFG1P41895 735 aaPredicted RBP9.73□□□□□ -0.85
PEF1YGR058W YDL129WQ07555 291 aa9.73□□□□□ -0.85
PEF1YGR058W YGR273CP53329 174 aa9.67□□□□□ -0.86
PEF1YGR058W MPH3P0CE00 602 aa9.63□□□□□ -0.87
PEF1YGR058W NOP53Q12080 455 aaKnown RBP9.6□□□□□ -0.87
PEF1YGR058W AI4P03878 556 aa9.59□□□□□ -0.87
PEF1YGR058W PRE3P38624 215 aa9.55□□□□□ -0.88
PEF1YGR058W VHR2P40041 505 aa9.54□□□□□ -0.88
PEF1YGR058W PEX29Q03370 554 aa9.53□□□□□ -0.88
PEF1YGR058W KEX1P09620 729 aa9.52□□□□□ -0.89
PEF1YGR058W SLI15P38283 698 aa9.52□□□□□ -0.89
PEF1YGR058W ELP4Q02884 456 aaKnown RBP9.51□□□□□ -0.89
PEF1YGR058W YLR326WQ06170 240 aaKnown RBP9.51□□□□□ -0.89
PEF1YGR058W CHL1P22516 861 aaPredicted RBP9.5□□□□□ -0.89
PEF1YGR058W UBP14P38237 781 aaKnown RBP9.49□□□□□ -0.89
PEF1YGR058W MPC54Q08550 464 aa9.47□□□□□ -0.89
PEF1YGR058W ARH1P48360 493 aa9.45□□□□□ -0.9
PEF1YGR058W DMA1P38823 416 aa9.43□□□□□ -0.9
PEF1YGR058W CDC73Q06697 393 aa9.43□□□□□ -0.9
PEF1YGR058W PCS60P38137 543 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9 RIP-Chip
PEF1YGR058W VPS70P47161 811 aa9.41□□□□□ -0.9
PEF1YGR058W BCK2P33306 851 aa9.39□□□□□ -0.91
PEF1YGR058W VRP1P37370 817 aa9.38□□□□□ -0.91
PEF1YGR058W YDR090CQ03193 310 aa9.38□□□□□ -0.91
PEF1YGR058W YPR148CQ06523 435 aa9.38□□□□□ -0.91
PEF1YGR058W NMA111P53920 997 aa9.37□□□□□ -0.91
PEF1YGR058W HAP5Q02516 242 aa9.37□□□□□ -0.91
PEF1YGR058W RAD54P32863 898 aa9.34□□□□□ -0.91
PEF1YGR058W DPL1Q05567 589 aa9.34□□□□□ -0.91
PEF1YGR058W SPT23P35210 1082 aa9.31□□□□□ -0.92
PEF1YGR058W YPR015CQ12531 247 aa9.29□□□□□ -0.92
PEF1YGR058W REF2P42073 533 aaPredicted RBP9.28□□□□□ -0.92
PEF1YGR058W PDR1P12383 1068 aa9.27□□□□□ -0.93
PEF1YGR058W IFH1P39520 1085 aa9.27□□□□□ -0.93
PEF1YGR058W BNI4P53858 892 aa9.26□□□□□ -0.93
PEF1YGR058W PTC2P39966 464 aaKnown RBP9.24□□□□□ -0.93
PEF1YGR058W RAM1P22007 431 aa9.22□□□□□ -0.93
PEF1YGR058W ISU2Q12056 156 aa9.22□□□□□ -0.93
PEF1YGR058W KIC1P38692 1080 aa9.2□□□□□ -0.94
PEF1YGR058W XDJ1P39102 459 aa9.18□□□□□ -0.94
PEF1YGR058W YML082WQ04533 649 aaKnown RBP9.17□□□□□ -0.94
PEF1YGR058W ORC6P38826 435 aa9.14□□□□□ -0.95
PEF1YGR058W YRR1Q12172 810 aa9.13□□□□□ -0.95
PEF1YGR058W COX6P00427 148 aa9.12□□□□□ -0.95
PEF1YGR058W GAP1P19145 602 aaPredicted RBP9.12□□□□□ -0.95
PEF1YGR058W PBS2P08018 668 aa9.09□□□□□ -0.95
PEF1YGR058W SAS10Q12136 610 aaPredicted RBP9.09□□□□□ -0.95
PEF1YGR058W TUM1Q08686 304 aaKnown RBP9.07□□□□□ -0.96
PEF1YGR058W PEX21P50091 288 aa9.05□□□□□ -0.96
PEF1YGR058W DPS1P04802 557 aaKnown RBP9.04□□□□□ -0.96
PEF1YGR058W STR2P47164 639 aa9.04□□□□□ -0.96
PEF1YGR058W ISM1P48526 1002 aa9.03□□□□□ -0.96
PEF1YGR058W MVP1P40959 511 aaKnown RBP9.02□□□□□ -0.97
PEF1YGR058W RPP1BP10622 106 aaKnown RBP9.01□□□□□ -0.97
PEF1YGR058W SDH2P21801 266 aa9.01□□□□□ -0.97
PEF1YGR058W CSC1Q06538 782 aa9.01□□□□□ -0.97
PEF1YGR058W BUD20Q08004 166 aaPredicted RBP9.01□□□□□ -0.97
PEF1YGR058W MAK21Q12176 1025 aaKnown RBP9.01□□□□□ -0.97
PEF1YGR058W CKB1P43639 278 aa9□□□□□ -0.97
PEF1YGR058W RAS1P01119 309 aa8.99□□□□□ -0.97
PEF1YGR058W RGR1P19263 1082 aa8.99□□□□□ -0.97
PEF1YGR058W NUD1P32336 851 aa8.99□□□□□ -0.97
PEF1YGR058W YPR109WQ06104 294 aa8.99□□□□□ -0.97
PEF1YGR058W GYP1Q08484 637 aa8.99□□□□□ -0.97
PEF1YGR058W TFB4Q12004 338 aa8.98□□□□□ -0.97
PEF1YGR058W IES2P40154 320 aa8.97□□□□□ -0.97
PEF1YGR058W MAM3Q12296 706 aa8.94□□□□□ -0.98
PEF1YGR058W TY1A-DR4O74302 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-HP0C2I4 478 aaKnown RBP8.93□□□□□ -0.98
PEF1YGR058W TY1A-AP0CX57 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-PR1P0CX58 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-ORP0CX59 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-PR2P0CX60 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-DR5P0CX65 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-ER2P0CX66 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-GR3P0CX67 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-LR1P0CX68 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-MR2P0CX69 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-JR2P47099 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-DR1Q03856 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-ML1Q04706 440 aaKnown RBP8.93□□□□□ -0.98
PEF1YGR058W TY1A-BRQ12217 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-NL2Q12470 440 aa8.93□□□□□ -0.98
PEF1YGR058W TY1A-GR2Q12485 440 aa8.93□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms