RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA7, Length 357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA7YGR020C IFH1P39520 1085 aa8.58□□□□□ -1.04
VMA7YGR020C HTA1P04911 132 aaKnown RBP8.55□□□□□ -1.04
VMA7YGR020C HTA2P04912 132 aa8.55□□□□□ -1.04
VMA7YGR020C RTG1P32607 177 aa8.54□□□□□ -1.04
VMA7YGR020C YNL035CP53962 389 aaKnown RBP8.54□□□□□ -1.04
VMA7YGR020C YPR148CQ06523 435 aa8.54□□□□□ -1.04
VMA7YGR020C SAS10Q12136 610 aaPredicted RBP8.53□□□□□ -1.04
VMA7YGR020C VPS70P47161 811 aa8.51□□□□□ -1.05
VMA7YGR020C YJL171CP46992 396 aa8.5□□□□□ -1.05
VMA7YGR020C SEC61P32915 480 aa8.49□□□□□ -1.05
VMA7YGR020C JIP4Q03361 876 aa8.49□□□□□ -1.05
VMA7YGR020C DAN4P47179 1161 aa8.48□□□□□ -1.05
VMA7YGR020C NCR1Q12200 1170 aa8.48□□□□□ -1.05
VMA7YGR020C YEL023CP39992 682 aa8.47□□□□□ -1.05
VMA7YGR020C PTC4P38089 393 aa8.45□□□□□ -1.06
VMA7YGR020C SOL3P38858 249 aa8.44□□□□□ -1.06
VMA7YGR020C YGR273CP53329 174 aa8.43□□□□□ -1.06
VMA7YGR020C BMT6Q12291 365 aa8.43□□□□□ -1.06
VMA7YGR020C CKB1P43639 278 aa8.41□□□□□ -1.06
VMA7YGR020C NST1P53935 1240 aa8.41□□□□□ -1.06
VMA7YGR020C TFG1P41895 735 aaPredicted RBP8.4□□□□□ -1.06
VMA7YGR020C REF2P42073 533 aaPredicted RBP8.38□□□□□ -1.07
VMA7YGR020C MPH3P0CE00 602 aa8.36□□□□□ -1.07
VMA7YGR020C VHR2P40041 505 aa8.36□□□□□ -1.07
VMA7YGR020C AI4P03878 556 aa8.35□□□□□ -1.07
VMA7YGR020C UBP14P38237 781 aaKnown RBP8.35□□□□□ -1.07
VMA7YGR020C YDL129WQ07555 291 aa8.35□□□□□ -1.07
VMA7YGR020C YLR326WQ06170 240 aaKnown RBP8.33□□□□□ -1.08
VMA7YGR020C KEX1P09620 729 aa8.32□□□□□ -1.08
VMA7YGR020C SAP30P38429 201 aa8.32□□□□□ -1.08
VMA7YGR020C ILV3P39522 585 aaKnown RBP8.31□□□□□ -1.08
VMA7YGR020C PBS2P08018 668 aa8.3□□□□□ -1.08
VMA7YGR020C SPB4P25808 606 aaPredicted RBP8.29□□□□□ -1.08
VMA7YGR020C PML39Q03760 334 aa8.29□□□□□ -1.08
VMA7YGR020C YDR090CQ03193 310 aa8.27□□□□□ -1.09
VMA7YGR020C MAK21Q12176 1025 aaKnown RBP8.27□□□□□ -1.09
VMA7YGR020C RAD54P32863 898 aa8.26□□□□□ -1.09
VMA7YGR020C COX6P00427 148 aa8.25□□□□□ -1.09
VMA7YGR020C KIC1P38692 1080 aa8.25□□□□□ -1.09
VMA7YGR020C PCS60P38137 543 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
VMA7YGR020C SLI15P38283 698 aa8.23□□□□□ -1.09
VMA7YGR020C MID1P41821 548 aa8.23□□□□□ -1.09
VMA7YGR020C DSF2P38213 736 aa8.22□□□□□ -1.09
VMA7YGR020C MAM3Q12296 706 aa8.19□□□□□ -1.1
VMA7YGR020C CHL1P22516 861 aaPredicted RBP8.17□□□□□ -1.1
VMA7YGR020C PRE3P38624 215 aa8.17□□□□□ -1.1
VMA7YGR020C PEX29Q03370 554 aa8.17□□□□□ -1.1
VMA7YGR020C YDR344CQ05510 147 aa8.17□□□□□ -1.1
VMA7YGR020C MPC54Q08550 464 aa8.14□□□□□ -1.11
VMA7YGR020C IES2P40154 320 aa8.13□□□□□ -1.11
VMA7YGR020C ARH1P48360 493 aa8.13□□□□□ -1.11
VMA7YGR020C CDC73Q06697 393 aa8.13□□□□□ -1.11
VMA7YGR020C RPP1BP10622 106 aaKnown RBP8.12□□□□□ -1.11
VMA7YGR020C ELP4Q02884 456 aaKnown RBP8.12□□□□□ -1.11
VMA7YGR020C DPL1Q05567 589 aa8.12□□□□□ -1.11
VMA7YGR020C LEU3P08638 886 aa8.11□□□□□ -1.11
VMA7YGR020C ORC6P38826 435 aa8.08□□□□□ -1.12
VMA7YGR020C NUP42P49686 430 aaKnown RBP8.08□□□□□ -1.12
VMA7YGR020C NMA111P53920 997 aa8.07□□□□□ -1.12
VMA7YGR020C HAP5Q02516 242 aa8.06□□□□□ -1.12
VMA7YGR020C DIT2P21595 489 aa8.05□□□□□ -1.12
VMA7YGR020C ISU2Q12056 156 aa8.05□□□□□ -1.12
VMA7YGR020C CSC1Q06538 782 aa8.04□□□□□ -1.12
VMA7YGR020C GAP1P19145 602 aaPredicted RBP8.03□□□□□ -1.12
VMA7YGR020C BCK2P33306 851 aa8.03□□□□□ -1.12
VMA7YGR020C PSE1P32337 1089 aaKnown RBP8.02□□□□□ -1.13
VMA7YGR020C SPT23P35210 1082 aa8.02□□□□□ -1.13
VMA7YGR020C PEX21P50091 288 aa8.02□□□□□ -1.13
VMA7YGR020C MVP1P40959 511 aaKnown RBP8.01□□□□□ -1.13
VMA7YGR020C TFB4Q12004 338 aa8.01□□□□□ -1.13
VMA7YGR020C RGR1P19263 1082 aa8□□□□□ -1.13
VMA7YGR020C YNR021WP53723 404 aaKnown RBP8□□□□□ -1.13
VMA7YGR020C BNI4P53858 892 aa8□□□□□ -1.13
VMA7YGR020C VRP1P37370 817 aa7.97□□□□□ -1.13
VMA7YGR020C TUM1Q08686 304 aaKnown RBP7.96□□□□□ -1.14
VMA7YGR020C YRR1Q12172 810 aa7.96□□□□□ -1.14
VMA7YGR020C RPN1P38764 993 aaKnown RBP7.95□□□□□ -1.14
VMA7YGR020C YPR109WQ06104 294 aa7.95□□□□□ -1.14
VMA7YGR020C GLC3P32775 704 aa7.94□□□□□ -1.14
VMA7YGR020C PTC2P39966 464 aaKnown RBP7.94□□□□□ -1.14
VMA7YGR020C ATF2P53296 535 aa7.93□□□□□ -1.14
VMA7YGR020C YML082WQ04533 649 aaKnown RBP7.93□□□□□ -1.14
VMA7YGR020C PDR1P12383 1068 aa7.91□□□□□ -1.14
VMA7YGR020C CLB5P30283 435 aa7.91□□□□□ -1.14
VMA7YGR020C TEA1P47988 759 aa7.9□□□□□ -1.14
VMA7YGR020C XDJ1P39102 459 aa7.89□□□□□ -1.15
VMA7YGR020C AIM7Q12156 149 aa7.89□□□□□ -1.15
VMA7YGR020C RAM1P22007 431 aa7.87□□□□□ -1.15
VMA7YGR020C NUD1P32336 851 aa7.85□□□□□ -1.15
VMA7YGR020C LEO1P38439 464 aa7.85□□□□□ -1.15
VMA7YGR020C YPR015CQ12531 247 aa7.85□□□□□ -1.15
VMA7YGR020C KIN1P13185 1064 aa7.82□□□□□ -1.16
VMA7YGR020C NPL4P33755 580 aa7.82□□□□□ -1.16
VMA7YGR020C ISM1P48526 1002 aa7.81□□□□□ -1.16
VMA7YGR020C STR2P47164 639 aa7.8□□□□□ -1.16
VMA7YGR020C NIS1P53939 407 aa7.8□□□□□ -1.16
VMA7YGR020C YMR196WQ04336 1088 aa7.77□□□□□ -1.17
VMA7YGR020C BUD20Q08004 166 aaPredicted RBP7.77□□□□□ -1.17
VMA7YGR020C SIT4P20604 311 aa7.76□□□□□ -1.17
VMA7YGR020C FPK1P53739 893 aa7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms