RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W ABP1P15891 592 aaKnown RBP7.67□□□□□ -1.18
PRP18YGR006W LEO1P38439 464 aa7.67□□□□□ -1.18
PRP18YGR006W ATH1P48016 1211 aa7.67□□□□□ -1.18
PRP18YGR006W IOC2Q12072 812 aa7.67□□□□□ -1.18
PRP18YGR006W HTA1P04911 132 aaKnown RBP7.65□□□□□ -1.18
PRP18YGR006W HTA2P04912 132 aa7.65□□□□□ -1.18
PRP18YGR006W SPB4P25808 606 aaPredicted RBP7.63□□□□□ -1.19
PRP18YGR006W GUT1P32190 709 aa7.63□□□□□ -1.19
PRP18YGR006W RTG1P32607 177 aa7.6□□□□□ -1.19
PRP18YGR006W FKH1P40466 484 aa7.6□□□□□ -1.19
PRP18YGR006W YEL023CP39992 682 aa7.59□□□□□ -1.19
PRP18YGR006W YNL035CP53962 389 aaKnown RBP7.57□□□□□ -1.2
PRP18YGR006W REF2P42073 533 aaPredicted RBP7.56□□□□□ -1.2
PRP18YGR006W PBS2P08018 668 aa7.55□□□□□ -1.2
PRP18YGR006W AIR2Q12476 344 aaKnown RBP7.55□□□□□ -1.2
PRP18YGR006W DSF2P38213 736 aa7.54□□□□□ -1.2
PRP18YGR006W JIP4Q03361 876 aa7.54□□□□□ -1.2
PRP18YGR006W PTC4P38089 393 aa7.53□□□□□ -1.2
PRP18YGR006W SOL3P38858 249 aa7.53□□□□□ -1.2
PRP18YGR006W DAN4P47179 1161 aa7.53□□□□□ -1.2
PRP18YGR006W SEC61P32915 480 aa7.51□□□□□ -1.21
PRP18YGR006W RPN1P38764 993 aaKnown RBP7.51□□□□□ -1.21
PRP18YGR006W MAK21Q12176 1025 aaKnown RBP7.51□□□□□ -1.21
PRP18YGR006W NCR1Q12200 1170 aa7.51□□□□□ -1.21
PRP18YGR006W YGR273CP53329 174 aa7.5□□□□□ -1.21
PRP18YGR006W NST1P53935 1240 aa7.5□□□□□ -1.21
PRP18YGR006W YJL171CP46992 396 aa7.49□□□□□ -1.21
PRP18YGR006W TFG1P41895 735 aaPredicted RBP7.47□□□□□ -1.21
PRP18YGR006W MAM3Q12296 706 aa7.47□□□□□ -1.21
PRP18YGR006W COX6P00427 148 aa7.45□□□□□ -1.22
PRP18YGR006W AI4P03878 556 aa7.44□□□□□ -1.22
PRP18YGR006W MPH3P0CE00 602 aa7.44□□□□□ -1.22
PRP18YGR006W ILV3P39522 585 aaKnown RBP7.44□□□□□ -1.22
PRP18YGR006W VHR2P40041 505 aa7.44□□□□□ -1.22
PRP18YGR006W BMT6Q12291 365 aa7.44□□□□□ -1.22
PRP18YGR006W PML39Q03760 334 aa7.43□□□□□ -1.22
PRP18YGR006W UBP14P38237 781 aaKnown RBP7.42□□□□□ -1.22
PRP18YGR006W SAP30P38429 201 aa7.41□□□□□ -1.22
PRP18YGR006W YDL129WQ07555 291 aa7.41□□□□□ -1.22
PRP18YGR006W KEX1P09620 729 aa7.4□□□□□ -1.22
PRP18YGR006W IES2P40154 320 aa7.4□□□□□ -1.22
PRP18YGR006W YNR021WP53723 404 aaKnown RBP7.4□□□□□ -1.22
PRP18YGR006W KIC1P38692 1080 aa7.39□□□□□ -1.23
PRP18YGR006W YLR326WQ06170 240 aaKnown RBP7.39□□□□□ -1.23
PRP18YGR006W MID1P41821 548 aa7.38□□□□□ -1.23
PRP18YGR006W RAD54P32863 898 aa7.37□□□□□ -1.23
PRP18YGR006W YDR090CQ03193 310 aa7.37□□□□□ -1.23
PRP18YGR006W NUP42P49686 430 aaKnown RBP7.36□□□□□ -1.23
PRP18YGR006W SLI15P38283 698 aa7.34□□□□□ -1.23
PRP18YGR006W TAF7Q05021 590 aa7.34□□□□□ -1.23
PRP18YGR006W PCS60P38137 543 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
PRP18YGR006W PEX29Q03370 554 aa7.33□□□□□ -1.24
PRP18YGR006W DIT2P21595 489 aa7.32□□□□□ -1.24
PRP18YGR006W AIM7Q12156 149 aa7.32□□□□□ -1.24
PRP18YGR006W GLC3P32775 704 aa7.31□□□□□ -1.24
PRP18YGR006W YDR344CQ05510 147 aa7.3□□□□□ -1.24
PRP18YGR006W KIN1P13185 1064 aa7.28□□□□□ -1.24
PRP18YGR006W ATF2P53296 535 aa7.28□□□□□ -1.24
PRP18YGR006W MPC54Q08550 464 aa7.27□□□□□ -1.25
PRP18YGR006W PSE1P32337 1089 aaKnown RBP7.26□□□□□ -1.25
PRP18YGR006W CDC73Q06697 393 aa7.26□□□□□ -1.25
PRP18YGR006W RPP1BP10622 106 aaKnown RBP7.25□□□□□ -1.25
PRP18YGR006W PRE3P38624 215 aa7.25□□□□□ -1.25
PRP18YGR006W ELP4Q02884 456 aaKnown RBP7.25□□□□□ -1.25
PRP18YGR006W ARH1P48360 493 aa7.23□□□□□ -1.25
PRP18YGR006W DPL1Q05567 589 aa7.23□□□□□ -1.25
PRP18YGR006W ORC6P38826 435 aa7.22□□□□□ -1.25
PRP18YGR006W CHL1P22516 861 aaPredicted RBP7.21□□□□□ -1.26
PRP18YGR006W NMA111P53920 997 aa7.2□□□□□ -1.26
PRP18YGR006W HAP5Q02516 242 aa7.2□□□□□ -1.26
PRP18YGR006W CSC1Q06538 782 aa7.18□□□□□ -1.26
PRP18YGR006W DMA2P53924 522 aa7.17□□□□□ -1.26
PRP18YGR006W RGR1P19263 1082 aa7.16□□□□□ -1.26
PRP18YGR006W CLB5P30283 435 aa7.16□□□□□ -1.26
PRP18YGR006W HGH1P48362 394 aaKnown RBP7.15□□□□□ -1.26
PRP18YGR006W ISU2Q12056 156 aa7.15□□□□□ -1.26
PRP18YGR006W GAP1P19145 602 aaPredicted RBP7.14□□□□□ -1.27
PRP18YGR006W SPT23P35210 1082 aa7.14□□□□□ -1.27
PRP18YGR006W MVP1P40959 511 aaKnown RBP7.14□□□□□ -1.27
PRP18YGR006W TEA1P47988 759 aa7.14□□□□□ -1.27
PRP18YGR006W TFB4Q12004 338 aa7.14□□□□□ -1.27
PRP18YGR006W PEX21P50091 288 aa7.13□□□□□ -1.27
PRP18YGR006W BNI4P53858 892 aa7.13□□□□□ -1.27
PRP18YGR006W GUA1P38625 525 aaKnown RBP7.1□□□□□ -1.27
PRP18YGR006W PTC2P39966 464 aaKnown RBP7.1□□□□□ -1.27
PRP18YGR006W YRR1Q12172 810 aa7.09□□□□□ -1.27
PRP18YGR006W SSA2P10592 639 aaKnown RBP7.08□□□□□ -1.28
PRP18YGR006W PDR1P12383 1068 aa7.08□□□□□ -1.28
PRP18YGR006W BCK2P33306 851 aa7.08□□□□□ -1.28
PRP18YGR006W HPC2Q01448 625 aa7.08□□□□□ -1.28
PRP18YGR006W YPR109WQ06104 294 aa7.08□□□□□ -1.28
PRP18YGR006W TUM1Q08686 304 aaKnown RBP7.08□□□□□ -1.28
PRP18YGR006W VRP1P37370 817 aa7.07□□□□□ -1.28
PRP18YGR006W CSN12P47130 423 aa7.07□□□□□ -1.28
PRP18YGR006W YMR196WQ04336 1088 aa7.04□□□□□ -1.28
PRP18YGR006W YPR015CQ12531 247 aa7.04□□□□□ -1.28
PRP18YGR006W RAM1P22007 431 aa7.03□□□□□ -1.28
PRP18YGR006W YML082WQ04533 649 aaKnown RBP7.03□□□□□ -1.28
PRP18YGR006W BRL1P38770 471 aa7.02□□□□□ -1.29
PRP18YGR006W NIS1P53939 407 aa7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms