RNA–Protein interactions for RNA: YGL029W

CGR1, Protein involved in nucleolar integrity and processing of pre-rRNA, yeastyeast

Gene CGR1, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CGR1YGL029W HTA2P04912 132 aa7.23□□□□□ -1.25
CGR1YGL029W DCW1P36091 449 aa7.23□□□□□ -1.25
CGR1YGL029W YDR344CQ05510 147 aa7.23□□□□□ -1.25
CGR1YGL029W YEL023CP39992 682 aa7.22□□□□□ -1.25
CGR1YGL029W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
CGR1YGL029W RCR1P38212 213 aa7.2□□□□□ -1.26
CGR1YGL029W RGA2Q06407 1009 aa7.19□□□□□ -1.26
CGR1YGL029W SSP1P38871 571 aa7.18□□□□□ -1.26
CGR1YGL029W DPS1P04802 557 aaKnown RBP7.14□□□□□ -1.27
CGR1YGL029W MGA2P40578 1113 aa7.12□□□□□ -1.27
CGR1YGL029W ELP4Q02884 456 aaKnown RBP7.12□□□□□ -1.27
CGR1YGL029W PML39Q03760 334 aa7.11□□□□□ -1.27
CGR1YGL029W ARH1P48360 493 aa7.03□□□□□ -1.28
CGR1YGL029W SRC1Q03707 834 aa7.03□□□□□ -1.28
CGR1YGL029W RQC2Q12532 1038 aaKnown RBP7.01□□□□□ -1.29
CGR1YGL029W RGA1P39083 1007 aa7□□□□□ -1.29
CGR1YGL029W GRE2Q12068 342 aaKnown RBP7□□□□□ -1.29
CGR1YGL029W MID1P41821 548 aa6.99□□□□□ -1.29
CGR1YGL029W SPT23P35210 1082 aa6.94□□□□□ -1.3
CGR1YGL029W NST1P53935 1240 aa6.93□□□□□ -1.3
CGR1YGL029W GUT1P32190 709 aa6.9□□□□□ -1.3
CGR1YGL029W ATH1P48016 1211 aa6.89□□□□□ -1.31
CGR1YGL029W PTC3P34221 468 aaKnown RBP6.86□□□□□ -1.31
CGR1YGL029W MIF2P35201 549 aa6.86□□□□□ -1.31
CGR1YGL029W EDS1P38073 919 aa6.86□□□□□ -1.31
CGR1YGL029W SOL3P38858 249 aa6.86□□□□□ -1.31
CGR1YGL029W HAP5Q02516 242 aa6.86□□□□□ -1.31
CGR1YGL029W PEX29Q03370 554 aa6.86□□□□□ -1.31
CGR1YGL029W YML082WQ04533 649 aaKnown RBP6.84□□□□□ -1.31
CGR1YGL029W BNI4P53858 892 aa6.83□□□□□ -1.32
CGR1YGL029W MPH3P0CE00 602 aa6.81□□□□□ -1.32
CGR1YGL029W AI4P03878 556 aa6.8□□□□□ -1.32
CGR1YGL029W ILV3P39522 585 aaKnown RBP6.8□□□□□ -1.32
CGR1YGL029W PTC2P39966 464 aaKnown RBP6.8□□□□□ -1.32
CGR1YGL029W RAS1P01119 309 aa6.79□□□□□ -1.32
CGR1YGL029W MAK11P20484 414 aaKnown RBP6.78□□□□□ -1.32
CGR1YGL029W MPC54Q08550 464 aa6.75□□□□□ -1.33
CGR1YGL029W RAM2P29703 316 aa6.73□□□□□ -1.33
CGR1YGL029W COQ8P27697 501 aa6.7□□□□□ -1.34
CGR1YGL029W NMA111P53920 997 aa6.7□□□□□ -1.34
CGR1YGL029W YPR015CQ12531 247 aa6.68□□□□□ -1.34
CGR1YGL029W TRK1P12685 1235 aa6.64□□□□□ -1.35
CGR1YGL029W YGR273CP53329 174 aa6.64□□□□□ -1.35
CGR1YGL029W SLI15P38283 698 aa6.63□□□□□ -1.35
CGR1YGL029W RAM1P22007 431 aa6.62□□□□□ -1.35
CGR1YGL029W DPL1Q05567 589 aa6.62□□□□□ -1.35
CGR1YGL029W AMS1P22855 1083 aa6.61□□□□□ -1.35
CGR1YGL029W SDH2P21801 266 aa6.56□□□□□ -1.36
CGR1YGL029W YPL062WQ02781 134 aa6.56□□□□□ -1.36
CGR1YGL029W GYP1Q08484 637 aa6.56□□□□□ -1.36
CGR1YGL029W TAF7Q05021 590 aa6.54□□□□□ -1.36
CGR1YGL029W ISU2Q12056 156 aa6.54□□□□□ -1.36
CGR1YGL029W DMA1P38823 416 aa6.52□□□□□ -1.37
CGR1YGL029W NOP53Q12080 455 aaKnown RBP6.51□□□□□ -1.37
CGR1YGL029W PDR1P12383 1068 aa6.47□□□□□ -1.37
CGR1YGL029W CDC73Q06697 393 aa6.47□□□□□ -1.37
CGR1YGL029W SAS4Q04003 481 aa6.46□□□□□ -1.38
CGR1YGL029W KEX1P09620 729 aa6.45□□□□□ -1.38
CGR1YGL029W YEL077CQ3E7X8 1277 aa6.42□□□□□ -1.38
CGR1YGL029W GAR1P28007 205 aaKnown RBP6.35□□□□□ -1.39
CGR1YGL029W MRF1P30775 413 aaPredicted RBP6.35□□□□□ -1.39
CGR1YGL029W BRE2P43132 505 aa6.35□□□□□ -1.39
CGR1YGL029W AIR1P40507 360 aaKnown RBP6.33□□□□□ -1.4
CGR1YGL029W YLR326WQ06170 240 aaKnown RBP6.33□□□□□ -1.4
CGR1YGL029W BUD20Q08004 166 aaPredicted RBP6.32□□□□□ -1.4
CGR1YGL029W UBP14P38237 781 aaKnown RBP6.31□□□□□ -1.4
CGR1YGL029W GBP2P25555 427 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4 RIP-Chip
CGR1YGL029W PCS60P38137 543 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
CGR1YGL029W CLA4P48562 842 aa6.3□□□□□ -1.4
CGR1YGL029W GCR2Q01722 534 aa6.29□□□□□ -1.4
CGR1YGL029W PRT1P06103 763 aaKnown RBP6.28□□□□□ -1.4
CGR1YGL029W CST6P40535 587 aa6.27□□□□□ -1.41
CGR1YGL029W VHR2P40041 505 aa6.26□□□□□ -1.41
CGR1YGL029W ERG12P07277 443 aa6.25□□□□□ -1.41
CGR1YGL029W LEO1P38439 464 aa6.25□□□□□ -1.41
CGR1YGL029W STR2P47164 639 aa6.25□□□□□ -1.41
CGR1YGL029W RAD54P32863 898 aa6.23□□□□□ -1.41
CGR1YGL029W ISM1P48526 1002 aa6.23□□□□□ -1.41
CGR1YGL029W YRR1Q12172 810 aa6.22□□□□□ -1.41
CGR1YGL029W RPP1BP10622 106 aaKnown RBP6.21□□□□□ -1.42
CGR1YGL029W LAM6Q08001 693 aa6.2□□□□□ -1.42
CGR1YGL029W MET22P32179 357 aa6.19□□□□□ -1.42
CGR1YGL029W CDC4P07834 779 aa6.15□□□□□ -1.42
CGR1YGL029W NUD1P32336 851 aa6.15□□□□□ -1.42
CGR1YGL029W ENV9Q08651 330 aa6.15□□□□□ -1.42
CGR1YGL029W GAP1P19145 602 aaPredicted RBP6.14□□□□□ -1.43
CGR1YGL029W PEX21P50091 288 aa6.14□□□□□ -1.43
CGR1YGL029W TY1A-DR4O74302 440 aa6.13□□□□□ -1.43
CGR1YGL029W TY1A-HP0C2I4 478 aaKnown RBP6.13□□□□□ -1.43
CGR1YGL029W TY1A-AP0CX57 440 aa6.13□□□□□ -1.43
CGR1YGL029W TY1A-PR1P0CX58 440 aa6.13□□□□□ -1.43
CGR1YGL029W TY1A-ORP0CX59 440 aa6.13□□□□□ -1.43
CGR1YGL029W TY1A-PR2P0CX60 440 aa6.13□□□□□ -1.43
CGR1YGL029W TY1A-DR5P0CX65 440 aa6.13□□□□□ -1.43
CGR1YGL029W TY1A-ER2P0CX66 440 aa6.13□□□□□ -1.43
CGR1YGL029W TY1A-GR3P0CX67 440 aa6.13□□□□□ -1.43
CGR1YGL029W TY1A-LR1P0CX68 440 aa6.13□□□□□ -1.43
CGR1YGL029W TY1A-MR2P0CX69 440 aa6.13□□□□□ -1.43
CGR1YGL029W SEC2P17065 759 aa6.13□□□□□ -1.43
CGR1YGL029W TY1A-JR2P47099 440 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms