RNA–Protein interactions for RNA: YGL008C

PMA1, Transcript of Plasma membrane P2-type H+-ATPase, yeastyeast

Gene PMA1, Length 2,757 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMA1YGL008C OSW7P43611 510 aa6.85□□□□□ -1.31
PMA1YGL008C RTS3P53289 263 aa6.85□□□□□ -1.31
PMA1YGL008C NOB1Q08444 459 aaKnown RBP6.85□□□□□ -1.31
PMA1YGL008C RSM7P47150 247 aa6.84□□□□□ -1.31
PMA1YGL008C BUD21Q08492 214 aaPredicted RBP6.84□□□□□ -1.31
PMA1YGL008C ALD4P46367 519 aaKnown RBP6.83□□□□□ -1.32
PMA1YGL008C ASF1P32447 279 aa6.83□□□□□ -1.32
PMA1YGL008C SPA2P23201 1466 aaKnown RBP6.83□□□□□ -1.32
PMA1YGL008C RCR1P38212 213 aa6.82□□□□□ -1.32
PMA1YGL008C ATG32P40458 529 aa6.81□□□□□ -1.32
PMA1YGL008C HGH1P48362 394 aaKnown RBP6.81□□□□□ -1.32
PMA1YGL008C PDR1P12383 1068 aa6.81□□□□□ -1.32
PMA1YGL008C BIM1P40013 344 aa6.8□□□□□ -1.32
PMA1YGL008C YIL055CP40523 627 aaKnown RBP6.8□□□□□ -1.32
PMA1YGL008C RRP15Q06511 250 aaPredicted RBP6.8□□□□□ -1.32
PMA1YGL008C HEM3P28789 327 aa6.8□□□□□ -1.32
PMA1YGL008C UBX5Q06682 500 aa6.8□□□□□ -1.32
PMA1YGL008C KOG1P38873 1557 aa6.8□□□□□ -1.32
PMA1YGL008C ALD2P47771 506 aa6.8□□□□□ -1.32
PMA1YGL008C IES2P40154 320 aa6.79□□□□□ -1.32
PMA1YGL008C YAF9P53930 226 aa6.79□□□□□ -1.32
PMA1YGL008C VPS72Q03388 795 aa6.79□□□□□ -1.32
PMA1YGL008C YKR023WP36119 530 aaKnown RBP6.78□□□□□ -1.32
PMA1YGL008C ISW1P38144 1129 aa6.78□□□□□ -1.32
PMA1YGL008C CWC22P53333 577 aaKnown RBP6.78□□□□□ -1.32
PMA1YGL008C ERG12P07277 443 aa6.77□□□□□ -1.33
PMA1YGL008C CST6P40535 587 aa6.77□□□□□ -1.33
PMA1YGL008C SUB1P54000 292 aaKnown RBP6.77□□□□□ -1.33
PMA1YGL008C SLD2P34252 453 aa6.75□□□□□ -1.33
PMA1YGL008C ZDS1P50111 915 aaKnown RBP6.74□□□□□ -1.33
PMA1YGL008C DNA2P38859 1522 aa6.74□□□□□ -1.33
PMA1YGL008C KEX1P09620 729 aa6.74□□□□□ -1.33
PMA1YGL008C SSA4P22202 642 aaKnown RBP6.74□□□□□ -1.33
PMA1YGL008C PRI1P10363 409 aa6.73□□□□□ -1.33
PMA1YGL008C CPS1P27614 576 aa6.73□□□□□ -1.33
PMA1YGL008C IPL1P38991 367 aa6.73□□□□□ -1.33
PMA1YGL008C PMC1P38929 1173 aaPredicted RBP6.72□□□□□ -1.33
PMA1YGL008C SIS2P36024 562 aa6.72□□□□□ -1.33
PMA1YGL008C MAK21Q12176 1025 aaKnown RBP6.72□□□□□ -1.33
PMA1YGL008C TIF1P10081 395 aaKnown RBP6.71□□□□□ -1.33
PMA1YGL008C YML083CQ04526 418 aa6.71□□□□□ -1.33
PMA1YGL008C CDC3P32457 520 aaKnown RBP6.71□□□□□ -1.34
PMA1YGL008C TTI1P36097 1038 aa6.71□□□□□ -1.34
PMA1YGL008C NMD2P38798 1089 aaKnown RBP6.71□□□□□ -1.34
PMA1YGL008C FPR4Q06205 392 aaPredicted RBP6.71□□□□□ -1.34
PMA1YGL008C MAG2Q06436 670 aaKnown RBP6.7□□□□□ -1.34
PMA1YGL008C ATE1P16639 503 aa6.7□□□□□ -1.34
PMA1YGL008C YJL007CP47080 104 aa6.69□□□□□ -1.34
PMA1YGL008C TOM20P35180 183 aa6.69□□□□□ -1.34
PMA1YGL008C RPS0BP46654 252 aaKnown RBP6.68□□□□□ -1.34
PMA1YGL008C RNH70P53331 553 aa6.68□□□□□ -1.34
PMA1YGL008C RLP24Q07915 199 aaKnown RBP6.68□□□□□ -1.34
PMA1YGL008C AI2P03876 854 aa6.67□□□□□ -1.34
PMA1YGL008C PUP1P25043 261 aa6.67□□□□□ -1.34
PMA1YGL008C TOA1P32773 286 aa6.67□□□□□ -1.34
PMA1YGL008C HAT1Q12341 374 aa6.67□□□□□ -1.34
PMA1YGL008C MAK11P20484 414 aaKnown RBP6.66□□□□□ -1.34
PMA1YGL008C KTR1P27810 393 aaKnown RBP6.66□□□□□ -1.34
PMA1YGL008C BRE1Q07457 700 aaKnown RBP6.66□□□□□ -1.34
PMA1YGL008C NOP53Q12080 455 aaKnown RBP6.64□□□□□ -1.35
PMA1YGL008C BIO2P32451 375 aa6.64□□□□□ -1.35
PMA1YGL008C ENP1P38333 483 aaKnown RBP6.64□□□□□ -1.35
PMA1YGL008C STB3Q12427 513 aa6.64□□□□□ -1.35
PMA1YGL008C SVL3Q03088 825 aaKnown RBP6.63□□□□□ -1.35
PMA1YGL008C HSL1P34244 1518 aa6.63□□□□□ -1.35
PMA1YGL008C COX6P00427 148 aa6.63□□□□□ -1.35
PMA1YGL008C IOC3P43596 787 aa6.62□□□□□ -1.35
PMA1YGL008C ITT1Q04638 464 aa6.62□□□□□ -1.35
PMA1YGL008C RPA135P22138 1203 aaKnown RBP6.62□□□□□ -1.35
PMA1YGL008C MNN4P36044 1178 aa6.62□□□□□ -1.35
PMA1YGL008C REF2P42073 533 aaPredicted RBP6.62□□□□□ -1.35
PMA1YGL008C CIT2P08679 460 aa6.61□□□□□ -1.35
PMA1YGL008C NNF1P47149 201 aa6.61□□□□□ -1.35
PMA1YGL008C KIP3P53086 805 aaKnown RBP6.6□□□□□ -1.35
PMA1YGL008C WHI5Q12416 295 aa6.6□□□□□ -1.35
PMA1YGL008C GAL11P19659 1081 aa6.6□□□□□ -1.35
PMA1YGL008C GRX4P32642 244 aa6.6□□□□□ -1.35
PMA1YGL008C RPL34AP87262 121 aaPredicted RBP6.6□□□□□ -1.35
PMA1YGL008C NAB3P38996 802 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
PMA1YGL008C TPM2P40414 161 aa6.59□□□□□ -1.35
PMA1YGL008C YOL098CQ12496 1037 aa6.59□□□□□ -1.35
PMA1YGL008C ATF2P53296 535 aa6.59□□□□□ -1.35
PMA1YGL008C NSR1P27476 414 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
PMA1YGL008C NOP2P40991 618 aaKnown RBP6.58□□□□□ -1.36
PMA1YGL008C SPT6P23615 1451 aaKnown RBP6.58□□□□□ -1.36
PMA1YGL008C TRL1P09880 827 aaKnown RBP6.58□□□□□ -1.36
PMA1YGL008C TSR4P25040 408 aa6.58□□□□□ -1.36
PMA1YGL008C YOL057WQ08225 711 aa6.58□□□□□ -1.36
PMA1YGL008C BUD6P41697 788 aa6.57□□□□□ -1.36
PMA1YGL008C HIF1Q12373 385 aa6.57□□□□□ -1.36
PMA1YGL008C COQ8P27697 501 aa6.57□□□□□ -1.36
PMA1YGL008C MAK16P10962 306 aaPredicted RBP6.56□□□□□ -1.36
PMA1YGL008C ALG12P53730 551 aa6.56□□□□□ -1.36
PMA1YGL008C MSC6Q08818 692 aaKnown RBP6.56□□□□□ -1.36
PMA1YGL008C TFC8Q12308 588 aa6.56□□□□□ -1.36
PMA1YGL008C AIM21P40563 679 aa6.56□□□□□ -1.36
PMA1YGL008C YDR090CQ03193 310 aa6.56□□□□□ -1.36
PMA1YGL008C RAD2P07276 1031 aa6.55□□□□□ -1.36
PMA1YGL008C CSN12P47130 423 aa6.55□□□□□ -1.36
PMA1YGL008C YDL121CQ07541 149 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms