RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C YNL035CP53962 389 aaKnown RBP8.83□□□□□ -1
RPB7YDR404C GUT1P32190 709 aa8.82□□□□□ -1
RPB7YDR404C AIR2Q12476 344 aaKnown RBP8.82□□□□□ -1
RPB7YDR404C MON2P48563 1636 aaPredicted RBP8.8□□□□□ -1
RPB7YDR404C JIP4Q03361 876 aa8.8□□□□□ -1
RPB7YDR404C NOP53Q12080 455 aaKnown RBP8.8□□□□□ -1
RPB7YDR404C SET1P38827 1080 aaKnown RBP8.79□□□□□ -1
RPB7YDR404C YEL023CP39992 682 aa8.79□□□□□ -1
RPB7YDR404C TFG1P41895 735 aaPredicted RBP8.79□□□□□ -1
RPB7YDR404C SEC61P32915 480 aa8.78□□□□□ -1
RPB7YDR404C NCR1Q12200 1170 aa8.77□□□□□ -1.01
RPB7YDR404C INO80P53115 1489 aa8.76□□□□□ -1.01
RPB7YDR404C PTC4P38089 393 aa8.75□□□□□ -1.01
RPB7YDR404C BMT6Q12291 365 aa8.73□□□□□ -1.01
RPB7YDR404C DAN4P47179 1161 aa8.7□□□□□ -1.02
RPB7YDR404C IFH1P39520 1085 aa8.66□□□□□ -1.02
RPB7YDR404C TAF7Q05021 590 aa8.64□□□□□ -1.03
RPB7YDR404C YDL129WQ07555 291 aa8.64□□□□□ -1.03
RPB7YDR404C SAP30P38429 201 aa8.63□□□□□ -1.03
RPB7YDR404C YGR273CP53329 174 aa8.62□□□□□ -1.03
RPB7YDR404C SOL3P38858 249 aa8.61□□□□□ -1.03
RPB7YDR404C AI4P03878 556 aa8.6□□□□□ -1.03
RPB7YDR404C PML39Q03760 334 aa8.6□□□□□ -1.03
RPB7YDR404C LEO1P38439 464 aa8.59□□□□□ -1.03
RPB7YDR404C MPH3P0CE00 602 aa8.58□□□□□ -1.04
RPB7YDR404C NST1P53935 1240 aa8.57□□□□□ -1.04
RPB7YDR404C PEX29Q03370 554 aa8.54□□□□□ -1.04
RPB7YDR404C SAS10Q12136 610 aaPredicted RBP8.54□□□□□ -1.04
RPB7YDR404C VPS70P47161 811 aa8.52□□□□□ -1.05
RPB7YDR404C YPR148CQ06523 435 aa8.52□□□□□ -1.05
RPB7YDR404C VHR2P40041 505 aa8.5□□□□□ -1.05
RPB7YDR404C MID1P41821 548 aa8.5□□□□□ -1.05
RPB7YDR404C KEX1P09620 729 aa8.49□□□□□ -1.05
RPB7YDR404C ILV3P39522 585 aaKnown RBP8.49□□□□□ -1.05
RPB7YDR404C ELP4Q02884 456 aaKnown RBP8.46□□□□□ -1.06
RPB7YDR404C CHL1P22516 861 aaPredicted RBP8.45□□□□□ -1.06
RPB7YDR404C PRE3P38624 215 aa8.45□□□□□ -1.06
RPB7YDR404C YLR326WQ06170 240 aaKnown RBP8.45□□□□□ -1.06
RPB7YDR404C UBP14P38237 781 aaKnown RBP8.44□□□□□ -1.06
RPB7YDR404C KIC1P38692 1080 aa8.44□□□□□ -1.06
RPB7YDR404C REF2P42073 533 aaPredicted RBP8.44□□□□□ -1.06
RPB7YDR404C LEU3P08638 886 aa8.43□□□□□ -1.06
RPB7YDR404C RAD54P32863 898 aa8.43□□□□□ -1.06
RPB7YDR404C SLI15P38283 698 aa8.43□□□□□ -1.06
RPB7YDR404C CKB1P43639 278 aa8.39□□□□□ -1.07
RPB7YDR404C ARH1P48360 493 aa8.39□□□□□ -1.07
RPB7YDR404C MPC54Q08550 464 aa8.39□□□□□ -1.07
RPB7YDR404C DNA2P38859 1522 aa8.39□□□□□ -1.07
RPB7YDR404C RPP1BP10622 106 aaKnown RBP8.38□□□□□ -1.07
RPB7YDR404C PCS60P38137 543 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
RPB7YDR404C HAP5Q02516 242 aa8.36□□□□□ -1.07
RPB7YDR404C DPL1Q05567 589 aa8.36□□□□□ -1.07
RPB7YDR404C YDR344CQ05510 147 aa8.35□□□□□ -1.07
RPB7YDR404C MAK21Q12176 1025 aaKnown RBP8.35□□□□□ -1.07
RPB7YDR404C YDR090CQ03193 310 aa8.33□□□□□ -1.08
RPB7YDR404C SPT23P35210 1082 aa8.32□□□□□ -1.08
RPB7YDR404C NMA111P53920 997 aa8.32□□□□□ -1.08
RPB7YDR404C BCK2P33306 851 aa8.31□□□□□ -1.08
RPB7YDR404C CDC73Q06697 393 aa8.31□□□□□ -1.08
RPB7YDR404C PBS2P08018 668 aa8.3□□□□□ -1.08
RPB7YDR404C COX6P00427 148 aa8.29□□□□□ -1.08
RPB7YDR404C BNI4P53858 892 aa8.28□□□□□ -1.08
RPB7YDR404C ISU2Q12056 156 aa8.28□□□□□ -1.08
RPB7YDR404C PTC2P39966 464 aaKnown RBP8.27□□□□□ -1.09
RPB7YDR404C VRP1P37370 817 aa8.25□□□□□ -1.09
RPB7YDR404C PEX21P50091 288 aa8.25□□□□□ -1.09
RPB7YDR404C SPB4P25808 606 aaPredicted RBP8.24□□□□□ -1.09
RPB7YDR404C SWR1Q05471 1514 aa8.21□□□□□ -1.1
RPB7YDR404C MAM3Q12296 706 aa8.21□□□□□ -1.1
RPB7YDR404C CSC1Q06538 782 aa8.2□□□□□ -1.1
RPB7YDR404C YML082WQ04533 649 aaKnown RBP8.18□□□□□ -1.1
RPB7YDR404C ORC6P38826 435 aa8.17□□□□□ -1.1
RPB7YDR404C TFB4Q12004 338 aa8.17□□□□□ -1.1
RPB7YDR404C DSF2P38213 736 aa8.16□□□□□ -1.1
RPB7YDR404C RPN1P38764 993 aaKnown RBP8.16□□□□□ -1.1
RPB7YDR404C YRR1Q12172 810 aa8.15□□□□□ -1.1
RPB7YDR404C KOG1P38873 1557 aa8.14□□□□□ -1.11
RPB7YDR404C XDJ1P39102 459 aa8.14□□□□□ -1.11
RPB7YDR404C IES2P40154 320 aa8.14□□□□□ -1.11
RPB7YDR404C TUM1Q08686 304 aaKnown RBP8.14□□□□□ -1.11
RPB7YDR404C GAP1P19145 602 aaPredicted RBP8.13□□□□□ -1.11
RPB7YDR404C PDR1P12383 1068 aa8.12□□□□□ -1.11
RPB7YDR404C MVP1P40959 511 aaKnown RBP8.1□□□□□ -1.11
RPB7YDR404C RAM1P22007 431 aa8.08□□□□□ -1.12
RPB7YDR404C PSE1P32337 1089 aaKnown RBP8.08□□□□□ -1.12
RPB7YDR404C RGR1P19263 1082 aa8.07□□□□□ -1.12
RPB7YDR404C NPL4P33755 580 aa8.07□□□□□ -1.12
RPB7YDR404C GYP1Q08484 637 aa8.07□□□□□ -1.12
RPB7YDR404C YPR015CQ12531 247 aa8.07□□□□□ -1.12
RPB7YDR404C NUD1P32336 851 aa8.05□□□□□ -1.12
RPB7YDR404C DMA2P53924 522 aa8.05□□□□□ -1.12
RPB7YDR404C YPR109WQ06104 294 aa8.05□□□□□ -1.12
RPB7YDR404C CLB5P30283 435 aa8.02□□□□□ -1.13
RPB7YDR404C NUP42P49686 430 aaKnown RBP8.02□□□□□ -1.13
RPB7YDR404C SAS4Q04003 481 aa8□□□□□ -1.13
RPB7YDR404C DPS1P04802 557 aaKnown RBP7.98□□□□□ -1.13
RPB7YDR404C DIT2P21595 489 aa7.98□□□□□ -1.13
RPB7YDR404C STR2P47164 639 aa7.98□□□□□ -1.13
RPB7YDR404C PRT1P06103 763 aaKnown RBP7.97□□□□□ -1.13
RPB7YDR404C ISM1P48526 1002 aa7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms