RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C JIP4Q03361 876 aa9.02□□□□□ -0.97
SPR28YDR218C YEL023CP39992 682 aa9.01□□□□□ -0.97
SPR28YDR218C GRE2Q12068 342 aaKnown RBP9.01□□□□□ -0.97
SPR28YDR218C RQC2Q12532 1038 aaKnown RBP9.01□□□□□ -0.97
SPR28YDR218C PTC3P34221 468 aaKnown RBP9□□□□□ -0.97
SPR28YDR218C COQ8P27697 501 aa8.99□□□□□ -0.97
SPR28YDR218C PTC4P38089 393 aa8.96□□□□□ -0.98
SPR28YDR218C SAP30P38429 201 aa8.94□□□□□ -0.98
SPR28YDR218C NST1P53935 1240 aa8.94□□□□□ -0.98
SPR28YDR218C GUT1P32190 709 aa8.92□□□□□ -0.98
SPR28YDR218C TFG1P41895 735 aaPredicted RBP8.92□□□□□ -0.98
SPR28YDR218C ATH1P48016 1211 aa8.92□□□□□ -0.98
SPR28YDR218C YDL129WQ07555 291 aa8.92□□□□□ -0.98
SPR28YDR218C SOL3P38858 249 aa8.89□□□□□ -0.99
SPR28YDR218C YDR344CQ05510 147 aa8.87□□□□□ -0.99
SPR28YDR218C PML39Q03760 334 aa8.83□□□□□ -1
SPR28YDR218C ILV3P39522 585 aaKnown RBP8.82□□□□□ -1
SPR28YDR218C PRE3P38624 215 aa8.78□□□□□ -1
SPR28YDR218C CHL1P22516 861 aaPredicted RBP8.77□□□□□ -1.01
SPR28YDR218C NOP53Q12080 455 aaKnown RBP8.77□□□□□ -1.01
SPR28YDR218C MPH3P0CE00 602 aa8.76□□□□□ -1.01
SPR28YDR218C MID1P41821 548 aa8.76□□□□□ -1.01
SPR28YDR218C AI4P03878 556 aa8.75□□□□□ -1.01
SPR28YDR218C YGR273CP53329 174 aa8.74□□□□□ -1.01
SPR28YDR218C BCK2P33306 851 aa8.69□□□□□ -1.02
SPR28YDR218C SET1P38827 1080 aaKnown RBP8.67□□□□□ -1.02
SPR28YDR218C ARH1P48360 493 aa8.66□□□□□ -1.02
SPR28YDR218C ELP4Q02884 456 aaKnown RBP8.66□□□□□ -1.02
SPR28YDR218C PEX29Q03370 554 aa8.62□□□□□ -1.03
SPR28YDR218C SLI15P38283 698 aa8.6□□□□□ -1.03
SPR28YDR218C MPC54Q08550 464 aa8.59□□□□□ -1.03
SPR28YDR218C KEX1P09620 729 aa8.58□□□□□ -1.04
SPR28YDR218C VRP1P37370 817 aa8.58□□□□□ -1.04
SPR28YDR218C HAP5Q02516 242 aa8.55□□□□□ -1.04
SPR28YDR218C YLR326WQ06170 240 aaKnown RBP8.54□□□□□ -1.04
SPR28YDR218C SPT23P35210 1082 aa8.53□□□□□ -1.04
SPR28YDR218C UBP14P38237 781 aaKnown RBP8.52□□□□□ -1.05
SPR28YDR218C VHR2P40041 505 aa8.51□□□□□ -1.05
SPR28YDR218C XDJ1P39102 459 aa8.5□□□□□ -1.05
SPR28YDR218C BNI4P53858 892 aa8.5□□□□□ -1.05
SPR28YDR218C NMA111P53920 997 aa8.49□□□□□ -1.05
SPR28YDR218C DPL1Q05567 589 aa8.49□□□□□ -1.05
SPR28YDR218C PCS60P38137 543 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
SPR28YDR218C TAF7Q05021 590 aa8.46□□□□□ -1.06
SPR28YDR218C CDC73Q06697 393 aa8.46□□□□□ -1.06
SPR28YDR218C YML082WQ04533 649 aaKnown RBP8.43□□□□□ -1.06
SPR28YDR218C YPR148CQ06523 435 aa8.43□□□□□ -1.06
SPR28YDR218C PTC2P39966 464 aaKnown RBP8.42□□□□□ -1.06
SPR28YDR218C YDR090CQ03193 310 aa8.42□□□□□ -1.06
SPR28YDR218C YPR015CQ12531 247 aa8.42□□□□□ -1.06
SPR28YDR218C RAM1P22007 431 aa8.4□□□□□ -1.06
SPR28YDR218C RAD54P32863 898 aa8.4□□□□□ -1.06
SPR28YDR218C IFH1P39520 1085 aa8.38□□□□□ -1.07
SPR28YDR218C ISU2Q12056 156 aa8.38□□□□□ -1.07
SPR28YDR218C DPS1P04802 557 aaKnown RBP8.34□□□□□ -1.07
SPR28YDR218C PDR1P12383 1068 aa8.34□□□□□ -1.07
SPR28YDR218C REF2P42073 533 aaPredicted RBP8.31□□□□□ -1.08
SPR28YDR218C VPS70P47161 811 aa8.3□□□□□ -1.08
SPR28YDR218C GAP1P19145 602 aaPredicted RBP8.27□□□□□ -1.09
SPR28YDR218C KIC1P38692 1080 aa8.25□□□□□ -1.09
SPR28YDR218C ORC6P38826 435 aa8.23□□□□□ -1.09
SPR28YDR218C SRC1Q03707 834 aa8.23□□□□□ -1.09
SPR28YDR218C RPP1BP10622 106 aaKnown RBP8.21□□□□□ -1.1
SPR28YDR218C SDH2P21801 266 aa8.2□□□□□ -1.1
SPR28YDR218C YRR1Q12172 810 aa8.2□□□□□ -1.1
SPR28YDR218C COX6P00427 148 aa8.18□□□□□ -1.1
SPR28YDR218C RAS1P01119 309 aa8.18□□□□□ -1.1
SPR28YDR218C STR2P47164 639 aa8.17□□□□□ -1.1
SPR28YDR218C CSC1Q06538 782 aa8.17□□□□□ -1.1
SPR28YDR218C GYP1Q08484 637 aa8.17□□□□□ -1.1
SPR28YDR218C TFB4Q12004 338 aa8.16□□□□□ -1.1
SPR28YDR218C MAK21Q12176 1025 aaKnown RBP8.16□□□□□ -1.1
SPR28YDR218C BUD20Q08004 166 aaPredicted RBP8.15□□□□□ -1.1
SPR28YDR218C PEX21P50091 288 aa8.14□□□□□ -1.11
SPR28YDR218C TUM1Q08686 304 aaKnown RBP8.14□□□□□ -1.11
SPR28YDR218C ISM1P48526 1002 aa8.13□□□□□ -1.11
SPR28YDR218C DMA1P38823 416 aa8.12□□□□□ -1.11
SPR28YDR218C NUD1P32336 851 aa8.11□□□□□ -1.11
SPR28YDR218C MVP1P40959 511 aaKnown RBP8.1□□□□□ -1.11
SPR28YDR218C AMS1P22855 1083 aa8.09□□□□□ -1.11
SPR28YDR218C SAS4Q04003 481 aa8.09□□□□□ -1.11
SPR28YDR218C TY1A-DR4O74302 440 aa8.07□□□□□ -1.12
SPR28YDR218C PBS2P08018 668 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-HP0C2I4 478 aaKnown RBP8.07□□□□□ -1.12
SPR28YDR218C TY1A-AP0CX57 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-PR1P0CX58 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-ORP0CX59 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-PR2P0CX60 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-DR5P0CX65 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-ER2P0CX66 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-GR3P0CX67 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-LR1P0CX68 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-MR2P0CX69 440 aa8.07□□□□□ -1.12
SPR28YDR218C RGR1P19263 1082 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-JR2P47099 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-DR1Q03856 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-ML1Q04706 440 aaKnown RBP8.07□□□□□ -1.12
SPR28YDR218C TY1A-BRQ12217 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-NL2Q12470 440 aa8.07□□□□□ -1.12
SPR28YDR218C TY1A-GR2Q12485 440 aa8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms