RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C ABP1P15891 592 aaKnown RBP3.51□□□□□ -1.85
SEC1YDR164C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
SEC1YDR164C DPS1P04802 557 aaKnown RBP3.5□□□□□ -1.85
SEC1YDR164C PTC4P38089 393 aa3.5□□□□□ -1.85
SEC1YDR164C YEL023CP39992 682 aa3.5□□□□□ -1.85
SEC1YDR164C CST9Q06032 482 aa3.49□□□□□ -1.85
SEC1YDR164C ELP4Q02884 456 aaKnown RBP3.48□□□□□ -1.85
SEC1YDR164C YDR344CQ05510 147 aa3.48□□□□□ -1.85
SEC1YDR164C RCR1P38212 213 aa3.46□□□□□ -1.86
SEC1YDR164C SSP1P38871 571 aa3.46□□□□□ -1.86
SEC1YDR164C PML39Q03760 334 aa3.45□□□□□ -1.86
SEC1YDR164C MGA2P40578 1113 aa3.43□□□□□ -1.86
SEC1YDR164C TFA1P36100 482 aa3.4□□□□□ -1.87
SEC1YDR164C ARH1P48360 493 aa3.39□□□□□ -1.87
SEC1YDR164C GRE2Q12068 342 aaKnown RBP3.39□□□□□ -1.87
SEC1YDR164C SRC1Q03707 834 aa3.39□□□□□ -1.87
SEC1YDR164C MID1P41821 548 aa3.38□□□□□ -1.87
SEC1YDR164C PEX29Q03370 554 aa3.37□□□□□ -1.87
SEC1YDR164C SPT23P35210 1082 aa3.36□□□□□ -1.87
SEC1YDR164C ATH1P48016 1211 aa3.35□□□□□ -1.87
SEC1YDR164C MIF2P35201 549 aa3.34□□□□□ -1.87
SEC1YDR164C GUT1P32190 709 aa3.32□□□□□ -1.88
SEC1YDR164C HAP5Q02516 242 aa3.32□□□□□ -1.88
SEC1YDR164C PTC2P39966 464 aaKnown RBP3.31□□□□□ -1.88
SEC1YDR164C PTC3P34221 468 aaKnown RBP3.31□□□□□ -1.88
SEC1YDR164C BNI4P53858 892 aa3.3□□□□□ -1.88
SEC1YDR164C RAS1P01119 309 aa3.29□□□□□ -1.88
SEC1YDR164C NST1P53935 1240 aa3.29□□□□□ -1.88
SEC1YDR164C EDS1P38073 919 aa3.29□□□□□ -1.88
SEC1YDR164C YML082WQ04533 649 aaKnown RBP3.29□□□□□ -1.88
SEC1YDR164C MPH3P0CE00 602 aa3.28□□□□□ -1.88
SEC1YDR164C SOL3P38858 249 aa3.28□□□□□ -1.88
SEC1YDR164C AI4P03878 556 aa3.27□□□□□ -1.89
SEC1YDR164C ILV3P39522 585 aaKnown RBP3.26□□□□□ -1.89
SEC1YDR164C MPC54Q08550 464 aa3.26□□□□□ -1.89
SEC1YDR164C MAK11P20484 414 aaKnown RBP3.25□□□□□ -1.89
SEC1YDR164C NMA111P53920 997 aa3.24□□□□□ -1.89
SEC1YDR164C TRK1P12685 1235 aa3.24□□□□□ -1.89
SEC1YDR164C COQ8P27697 501 aa3.22□□□□□ -1.89
SEC1YDR164C RAM2P29703 316 aa3.22□□□□□ -1.89
SEC1YDR164C GYP1Q08484 637 aa3.21□□□□□ -1.9
SEC1YDR164C YPR015CQ12531 247 aa3.21□□□□□ -1.9
SEC1YDR164C AMS1P22855 1083 aa3.21□□□□□ -1.9
SEC1YDR164C YGR273CP53329 174 aa3.19□□□□□ -1.9
SEC1YDR164C DPL1Q05567 589 aa3.19□□□□□ -1.9
SEC1YDR164C SLI15P38283 698 aa3.19□□□□□ -1.9
SEC1YDR164C YPL062WQ02781 134 aa3.19□□□□□ -1.9
SEC1YDR164C RAM1P22007 431 aa3.17□□□□□ -1.9
SEC1YDR164C ISU2Q12056 156 aa3.15□□□□□ -1.9
SEC1YDR164C SDH2P21801 266 aa3.14□□□□□ -1.91
SEC1YDR164C GBP2P25555 427 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
SEC1YDR164C YEL077CQ3E7X8 1277 aa3.14□□□□□ -1.91
SEC1YDR164C PDR1P12383 1068 aa3.13□□□□□ -1.91
SEC1YDR164C GAR1P28007 205 aaKnown RBP3.13□□□□□ -1.91
SEC1YDR164C SAS4Q04003 481 aa3.12□□□□□ -1.91
SEC1YDR164C CDC73Q06697 393 aa3.12□□□□□ -1.91
SEC1YDR164C KEX1P09620 729 aa3.1□□□□□ -1.91
SEC1YDR164C NOP53Q12080 455 aaKnown RBP3.1□□□□□ -1.91
SEC1YDR164C BRE2P43132 505 aa3.1□□□□□ -1.91
SEC1YDR164C MRF1P30775 413 aaPredicted RBP3.08□□□□□ -1.92
SEC1YDR164C GCR2Q01722 534 aa3.08□□□□□ -1.92
SEC1YDR164C AIR1P40507 360 aaKnown RBP3.07□□□□□ -1.92
SEC1YDR164C ERG12P07277 443 aa3.05□□□□□ -1.92
SEC1YDR164C PRT1P06103 763 aaKnown RBP3.04□□□□□ -1.92
SEC1YDR164C CLA4P48562 842 aa3.04□□□□□ -1.92
SEC1YDR164C BUD20Q08004 166 aaPredicted RBP3.04□□□□□ -1.92
SEC1YDR164C RPP1BP10622 106 aaKnown RBP3.03□□□□□ -1.92
SEC1YDR164C VHR2P40041 505 aa3.03□□□□□ -1.92
SEC1YDR164C YLR326WQ06170 240 aaKnown RBP3.03□□□□□ -1.92
SEC1YDR164C CST6P40535 587 aa3.02□□□□□ -1.93
SEC1YDR164C YRR1Q12172 810 aa3.02□□□□□ -1.93
SEC1YDR164C RAD54P32863 898 aa3.01□□□□□ -1.93
SEC1YDR164C PCS60P38137 543 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
SEC1YDR164C UBP14P38237 781 aaKnown RBP3.01□□□□□ -1.93
SEC1YDR164C PEX21P50091 288 aa3.01□□□□□ -1.93
SEC1YDR164C STR2P47164 639 aa3□□□□□ -1.93
SEC1YDR164C MET22P32179 357 aa3□□□□□ -1.93
SEC1YDR164C ISM1P48526 1002 aa3□□□□□ -1.93
SEC1YDR164C FRK1Q03002 865 aaPredicted RBP3□□□□□ -1.93
SEC1YDR164C LAM6Q08001 693 aa2.98□□□□□ -1.93
SEC1YDR164C CDC4P07834 779 aa2.98□□□□□ -1.93
SEC1YDR164C SPT16P32558 1035 aaKnown RBP2.98□□□□□ -1.93
SEC1YDR164C NUD1P32336 851 aa2.97□□□□□ -1.93
SEC1YDR164C NPL4P33755 580 aa2.97□□□□□ -1.93
SEC1YDR164C ENV9Q08651 330 aa2.97□□□□□ -1.93
SEC1YDR164C GCD11P32481 527 aaKnown RBP2.97□□□□□ -1.93
SEC1YDR164C YDR444WQ04093 687 aa2.96□□□□□ -1.94
SEC1YDR164C TUM1Q08686 304 aaKnown RBP2.96□□□□□ -1.94
SEC1YDR164C KIC1P38692 1080 aa2.95□□□□□ -1.94
SEC1YDR164C BDP1P46678 594 aa2.94□□□□□ -1.94
SEC1YDR164C SET1P38827 1080 aaKnown RBP2.94□□□□□ -1.94
SEC1YDR164C TFB4Q12004 338 aa2.94□□□□□ -1.94
SEC1YDR164C TY1A-DR4O74302 440 aa2.93□□□□□ -1.94
SEC1YDR164C TY1A-HP0C2I4 478 aaKnown RBP2.93□□□□□ -1.94
SEC1YDR164C TY1A-AP0CX57 440 aa2.93□□□□□ -1.94
SEC1YDR164C TY1A-PR1P0CX58 440 aa2.93□□□□□ -1.94
SEC1YDR164C TY1A-ORP0CX59 440 aa2.93□□□□□ -1.94
SEC1YDR164C TY1A-PR2P0CX60 440 aa2.93□□□□□ -1.94
SEC1YDR164C TY1A-DR5P0CX65 440 aa2.93□□□□□ -1.94
SEC1YDR164C TY1A-ER2P0CX66 440 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms