RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C IFH1P39520 1085 aa7□□□□□ -1.29
AFR1YDR085C YPR148CQ06523 435 aa7□□□□□ -1.29
AFR1YDR085C YEL023CP39992 682 aa7□□□□□ -1.29
AFR1YDR085C FKH1P40466 484 aa7□□□□□ -1.29
AFR1YDR085C SOL3P38858 249 aa6.99□□□□□ -1.29
AFR1YDR085C YNL035CP53962 389 aaKnown RBP6.99□□□□□ -1.29
AFR1YDR085C NST1P53935 1240 aa6.98□□□□□ -1.29
AFR1YDR085C JIP4Q03361 876 aa6.98□□□□□ -1.29
AFR1YDR085C RTG1P32607 177 aa6.98□□□□□ -1.29
AFR1YDR085C PTC4P38089 393 aa6.98□□□□□ -1.29
AFR1YDR085C DAN4P47179 1161 aa6.97□□□□□ -1.29
AFR1YDR085C AIR2Q12476 344 aaKnown RBP6.97□□□□□ -1.29
AFR1YDR085C SAS10Q12136 610 aaPredicted RBP6.96□□□□□ -1.3
AFR1YDR085C SEC61P32915 480 aa6.95□□□□□ -1.3
AFR1YDR085C YGR273CP53329 174 aa6.95□□□□□ -1.3
AFR1YDR085C VPS70P47161 811 aa6.93□□□□□ -1.3
AFR1YDR085C NCR1Q12200 1170 aa6.93□□□□□ -1.3
AFR1YDR085C MPH3P0CE00 602 aa6.91□□□□□ -1.3
AFR1YDR085C AI4P03878 556 aa6.9□□□□□ -1.3
AFR1YDR085C ILV3P39522 585 aaKnown RBP6.88□□□□□ -1.31
AFR1YDR085C UBP14P38237 781 aaKnown RBP6.87□□□□□ -1.31
AFR1YDR085C TFG1P41895 735 aaPredicted RBP6.87□□□□□ -1.31
AFR1YDR085C YLR326WQ06170 240 aaKnown RBP6.86□□□□□ -1.31
AFR1YDR085C VHR2P40041 505 aa6.85□□□□□ -1.31
AFR1YDR085C REF2P42073 533 aaPredicted RBP6.85□□□□□ -1.31
AFR1YDR085C YJL171CP46992 396 aa6.85□□□□□ -1.31
AFR1YDR085C KEX1P09620 729 aa6.85□□□□□ -1.31
AFR1YDR085C CKB1P43639 278 aa6.85□□□□□ -1.31
AFR1YDR085C PML39Q03760 334 aa6.84□□□□□ -1.31
AFR1YDR085C YDL129WQ07555 291 aa6.84□□□□□ -1.31
AFR1YDR085C BMT6Q12291 365 aa6.83□□□□□ -1.32
AFR1YDR085C YDR090CQ03193 310 aa6.81□□□□□ -1.32
AFR1YDR085C SAP30P38429 201 aa6.8□□□□□ -1.32
AFR1YDR085C MID1P41821 548 aa6.8□□□□□ -1.32
AFR1YDR085C PCS60P38137 543 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
AFR1YDR085C SLI15P38283 698 aa6.79□□□□□ -1.32
AFR1YDR085C RAD54P32863 898 aa6.78□□□□□ -1.32
AFR1YDR085C PBS2P08018 668 aa6.77□□□□□ -1.33
AFR1YDR085C MAK21Q12176 1025 aaKnown RBP6.77□□□□□ -1.33
AFR1YDR085C COX6P00427 148 aa6.76□□□□□ -1.33
AFR1YDR085C KIC1P38692 1080 aa6.73□□□□□ -1.33
AFR1YDR085C DSF2P38213 736 aa6.73□□□□□ -1.33
AFR1YDR085C YDR344CQ05510 147 aa6.73□□□□□ -1.33
AFR1YDR085C MPC54Q08550 464 aa6.73□□□□□ -1.33
AFR1YDR085C PEX29Q03370 554 aa6.72□□□□□ -1.33
AFR1YDR085C SPB4P25808 606 aaPredicted RBP6.71□□□□□ -1.34
AFR1YDR085C ARH1P48360 493 aa6.69□□□□□ -1.34
AFR1YDR085C DPL1Q05567 589 aa6.69□□□□□ -1.34
AFR1YDR085C CDC73Q06697 393 aa6.69□□□□□ -1.34
AFR1YDR085C PRE3P38624 215 aa6.68□□□□□ -1.34
AFR1YDR085C MAM3Q12296 706 aa6.67□□□□□ -1.34
AFR1YDR085C CHL1P22516 861 aaPredicted RBP6.66□□□□□ -1.34
AFR1YDR085C NMA111P53920 997 aa6.66□□□□□ -1.34
AFR1YDR085C ELP4Q02884 456 aaKnown RBP6.66□□□□□ -1.34
AFR1YDR085C HAP5Q02516 242 aa6.65□□□□□ -1.34
AFR1YDR085C RPP1BP10622 106 aaKnown RBP6.64□□□□□ -1.35
AFR1YDR085C ORC6P38826 435 aa6.64□□□□□ -1.35
AFR1YDR085C GAP1P19145 602 aaPredicted RBP6.64□□□□□ -1.35
AFR1YDR085C IES2P40154 320 aa6.64□□□□□ -1.35
AFR1YDR085C ISU2Q12056 156 aa6.64□□□□□ -1.35
AFR1YDR085C NUP42P49686 430 aaKnown RBP6.62□□□□□ -1.35
AFR1YDR085C SPT23P35210 1082 aa6.6□□□□□ -1.35
AFR1YDR085C BNI4P53858 892 aa6.6□□□□□ -1.35
AFR1YDR085C CSC1Q06538 782 aa6.6□□□□□ -1.35
AFR1YDR085C DIT2P21595 489 aa6.58□□□□□ -1.36
AFR1YDR085C MVP1P40959 511 aaKnown RBP6.58□□□□□ -1.36
AFR1YDR085C TFB4Q12004 338 aa6.58□□□□□ -1.36
AFR1YDR085C RGR1P19263 1082 aa6.57□□□□□ -1.36
AFR1YDR085C PSE1P32337 1089 aaKnown RBP6.57□□□□□ -1.36
AFR1YDR085C PEX21P50091 288 aa6.56□□□□□ -1.36
AFR1YDR085C LEU3P08638 886 aa6.56□□□□□ -1.36
AFR1YDR085C PTC2P39966 464 aaKnown RBP6.55□□□□□ -1.36
AFR1YDR085C YML082WQ04533 649 aaKnown RBP6.54□□□□□ -1.36
AFR1YDR085C TUM1Q08686 304 aaKnown RBP6.54□□□□□ -1.36
AFR1YDR085C YRR1Q12172 810 aa6.53□□□□□ -1.36
AFR1YDR085C PDR1P12383 1068 aa6.53□□□□□ -1.36
AFR1YDR085C RAM1P22007 431 aa6.53□□□□□ -1.36
AFR1YDR085C YPR109WQ06104 294 aa6.52□□□□□ -1.37
AFR1YDR085C BCK2P33306 851 aa6.51□□□□□ -1.37
AFR1YDR085C YNR021WP53723 404 aaKnown RBP6.51□□□□□ -1.37
AFR1YDR085C VRP1P37370 817 aa6.5□□□□□ -1.37
AFR1YDR085C YPR015CQ12531 247 aa6.5□□□□□ -1.37
AFR1YDR085C CLB5P30283 435 aa6.47□□□□□ -1.37
AFR1YDR085C NUD1P32336 851 aa6.46□□□□□ -1.38
AFR1YDR085C GLC3P32775 704 aa6.46□□□□□ -1.38
AFR1YDR085C TEA1P47988 759 aa6.45□□□□□ -1.38
AFR1YDR085C STR2P47164 639 aa6.44□□□□□ -1.38
AFR1YDR085C ISM1P48526 1002 aa6.43□□□□□ -1.38
AFR1YDR085C ATF2P53296 535 aa6.43□□□□□ -1.38
AFR1YDR085C BUD20Q08004 166 aaPredicted RBP6.43□□□□□ -1.38
AFR1YDR085C XDJ1P39102 459 aa6.42□□□□□ -1.38
AFR1YDR085C AIM7Q12156 149 aa6.42□□□□□ -1.38
AFR1YDR085C RPN1P38764 993 aaKnown RBP6.41□□□□□ -1.38
AFR1YDR085C NPL4P33755 580 aa6.41□□□□□ -1.38
AFR1YDR085C NIS1P53939 407 aa6.39□□□□□ -1.39
AFR1YDR085C SIT4P20604 311 aa6.38□□□□□ -1.39
AFR1YDR085C TY1A-DR4O74302 440 aa6.37□□□□□ -1.39
AFR1YDR085C PRT1P06103 763 aaKnown RBP6.37□□□□□ -1.39
AFR1YDR085C TY1A-HP0C2I4 478 aaKnown RBP6.37□□□□□ -1.39
AFR1YDR085C TY1A-AP0CX57 440 aa6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms