RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	GRE2	Q12068	342 aa	Known RBP	10.4	□□□□□ -0.74
RPC53	YDL150W	DCW1	P36091	449 aa		10.39	□□□□□ -0.75
RPC53	YDL150W	NOP53	Q12080	455 aa	Known RBP	10.39	□□□□□ -0.75
RPC53	YDL150W	NCR1	Q12200	1170 aa		10.38	□□□□□ -0.75
RPC53	YDL150W	GUT1	P32190	709 aa		10.36	□□□□□ -0.75
RPC53	YDL150W	BMT6	Q12291	365 aa		10.36	□□□□□ -0.75
RPC53	YDL150W	PTC4	P38089	393 aa		10.33	□□□□□ -0.76
RPC53	YDL150W	YEL023C	P39992	682 aa		10.33	□□□□□ -0.76
RPC53	YDL150W	ATH1	P48016	1211 aa		10.32	□□□□□ -0.76
RPC53	YDL150W	NST1	P53935	1240 aa		10.28	□□□□□ -0.76
RPC53	YDL150W	TFG1	P41895	735 aa	Predicted RBP	10.25	□□□□□ -0.77
RPC53	YDL150W	SOL3	P38858	249 aa		10.23	□□□□□ -0.77
RPC53	YDL150W	YDL129W	Q07555	291 aa		10.23	□□□□□ -0.77
RPC53	YDL150W	SET1	P38827	1080 aa	Known RBP	10.17	□□□□□ -0.78
RPC53	YDL150W	MPH3	P0CE00	602 aa		10.16	□□□□□ -0.78
RPC53	YDL150W	AI4	P03878	556 aa		10.15	□□□□□ -0.78
RPC53	YDL150W	SAP30	P38429	201 aa		10.15	□□□□□ -0.78
RPC53	YDL150W	YGR273C	P53329	174 aa		10.13	□□□□□ -0.79
RPC53	YDL150W	PML39	Q03760	334 aa		10.1	□□□□□ -0.79
RPC53	YDL150W	ILV3	P39522	585 aa	Known RBP	10.09	□□□□□ -0.79
RPC53	YDL150W	CHL1	P22516	861 aa	Predicted RBP	10.05	□□□□□ -0.8
RPC53	YDL150W	PRE3	P38624	215 aa		10.04	□□□□□ -0.8
RPC53	YDL150W	IFH1	P39520	1085 aa		10	□□□□□ -0.81
RPC53	YDL150W	MID1	P41821	548 aa		10	□□□□□ -0.81
RPC53	YDL150W	YDR344C	Q05510	147 aa		9.98	□□□□□ -0.81
RPC53	YDL150W	YPR148C	Q06523	435 aa		9.98	□□□□□ -0.81
RPC53	YDL150W	ARH1	P48360	493 aa		9.97	□□□□□ -0.81
RPC53	YDL150W	KEX1	P09620	729 aa		9.95	□□□□□ -0.82
RPC53	YDL150W	UBP14	P38237	781 aa	Known RBP	9.93	□□□□□ -0.82
RPC53	YDL150W	SLI15	P38283	698 aa		9.92	□□□□□ -0.82
RPC53	YDL150W	YLR326W	Q06170	240 aa	Known RBP	9.92	□□□□□ -0.82
RPC53	YDL150W	ELP4	Q02884	456 aa	Known RBP	9.9	□□□□□ -0.82
RPC53	YDL150W	BCK2	P33306	851 aa		9.89	□□□□□ -0.83
RPC53	YDL150W	PEX29	Q03370	554 aa		9.88	□□□□□ -0.83
RPC53	YDL150W	MPC54	Q08550	464 aa		9.88	□□□□□ -0.83
RPC53	YDL150W	VHR2	P40041	505 aa		9.85	□□□□□ -0.83
RPC53	YDL150W	HAP5	Q02516	242 aa		9.85	□□□□□ -0.83
RPC53	YDL150W	SPT23	P35210	1082 aa		9.83	□□□□□ -0.84
RPC53	YDL150W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	9.82	□□□□□ -0.84	not detected
RPC53	YDL150W	DPL1	Q05567	589 aa		9.82	□□□□□ -0.84
RPC53	YDL150W	BNI4	P53858	892 aa		9.81	□□□□□ -0.84
RPC53	YDL150W	YDR090C	Q03193	310 aa		9.81	□□□□□ -0.84
RPC53	YDL150W	RAD54	P32863	898 aa		9.79	□□□□□ -0.84
RPC53	YDL150W	REF2	P42073	533 aa	Predicted RBP	9.79	□□□□□ -0.84
RPC53	YDL150W	NMA111	P53920	997 aa		9.79	□□□□□ -0.84
RPC53	YDL150W	VPS70	P47161	811 aa		9.76	□□□□□ -0.85
RPC53	YDL150W	VRP1	P37370	817 aa		9.75	□□□□□ -0.85
RPC53	YDL150W	YML082W	Q04533	649 aa	Known RBP	9.75	□□□□□ -0.85
RPC53	YDL150W	RQC2	Q12532	1038 aa	Known RBP	9.75	□□□□□ -0.85
RPC53	YDL150W	DMA1	P38823	416 aa		9.74	□□□□□ -0.85
RPC53	YDL150W	CDC73	Q06697	393 aa		9.74	□□□□□ -0.85
RPC53	YDL150W	ISU2	Q12056	156 aa		9.74	□□□□□ -0.85
RPC53	YDL150W	XDJ1	P39102	459 aa		9.73	□□□□□ -0.85
RPC53	YDL150W	PTC2	P39966	464 aa	Known RBP	9.7	□□□□□ -0.86
RPC53	YDL150W	MAK21	Q12176	1025 aa	Known RBP	9.7	□□□□□ -0.86
RPC53	YDL150W	SAS10	Q12136	610 aa	Predicted RBP	9.69	□□□□□ -0.86
RPC53	YDL150W	RPP1B	P10622	106 aa	Known RBP	9.67	□□□□□ -0.86
RPC53	YDL150W	KIC1	P38692	1080 aa		9.67	□□□□□ -0.86
RPC53	YDL150W	COX6	P00427	148 aa		9.66	□□□□□ -0.86
RPC53	YDL150W	GAP1	P19145	602 aa	Predicted RBP	9.66	□□□□□ -0.86
RPC53	YDL150W	CKB1	P43639	278 aa		9.66	□□□□□ -0.86
RPC53	YDL150W	RAM1	P22007	431 aa		9.65	□□□□□ -0.86
RPC53	YDL150W	ORC6	P38826	435 aa		9.6	□□□□□ -0.87
RPC53	YDL150W	YPR015C	Q12531	247 aa		9.6	□□□□□ -0.87
RPC53	YDL150W	CSC1	Q06538	782 aa		9.59	□□□□□ -0.87
RPC53	YDL150W	TFB4	Q12004	338 aa		9.57	□□□□□ -0.88
RPC53	YDL150W	PDR1	P12383	1068 aa		9.55	□□□□□ -0.88
RPC53	YDL150W	PBS2	P08018	668 aa		9.54	□□□□□ -0.88
RPC53	YDL150W	PEX21	P50091	288 aa		9.5	□□□□□ -0.89
RPC53	YDL150W	DSF2	P38213	736 aa		9.48	□□□□□ -0.89
RPC53	YDL150W	YRR1	Q12172	810 aa		9.48	□□□□□ -0.89
RPC53	YDL150W	MVP1	P40959	511 aa	Known RBP	9.47	□□□□□ -0.89
RPC53	YDL150W	DPS1	P04802	557 aa	Known RBP	9.45	□□□□□ -0.9
RPC53	YDL150W	RGR1	P19263	1082 aa		9.45	□□□□□ -0.9
RPC53	YDL150W	TUM1	Q08686	304 aa	Known RBP	9.45	□□□□□ -0.9
RPC53	YDL150W	SAS4	Q04003	481 aa		9.44	□□□□□ -0.9
RPC53	YDL150W	MAM3	Q12296	706 aa		9.42	□□□□□ -0.9
RPC53	YDL150W	PSE1	P32337	1089 aa	Known RBP	9.41	□□□□□ -0.9
RPC53	YDL150W	STR2	P47164	639 aa		9.41	□□□□□ -0.9
RPC53	YDL150W	BUD20	Q08004	166 aa	Predicted RBP	9.41	□□□□□ -0.9
RPC53	YDL150W	NUD1	P32336	851 aa		9.4	□□□□□ -0.9
RPC53	YDL150W	GYP1	Q08484	637 aa		9.4	□□□□□ -0.9
RPC53	YDL150W	ISM1	P48526	1002 aa		9.39	□□□□□ -0.91
RPC53	YDL150W	YPR109W	Q06104	294 aa		9.38	□□□□□ -0.91
RPC53	YDL150W	SDH2	P21801	266 aa		9.36	□□□□□ -0.91
RPC53	YDL150W	PRT1	P06103	763 aa	Known RBP	9.35	□□□□□ -0.91
RPC53	YDL150W	IES2	P40154	320 aa		9.35	□□□□□ -0.91
RPC53	YDL150W	NUP42	P49686	430 aa	Known RBP	9.35	□□□□□ -0.91
RPC53	YDL150W	SPB4	P25808	606 aa	Predicted RBP	9.31	□□□□□ -0.92
RPC53	YDL150W	TY1A-DR4	O74302	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-H	P0C2I4	478 aa	Known RBP	9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-A	P0CX57	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-PR1	P0CX58	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-OR	P0CX59	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-PR2	P0CX60	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-DR5	P0CX65	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-ER2	P0CX66	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-GR3	P0CX67	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-LR1	P0CX68	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-MR2	P0CX69	440 aa		9.3	□□□□□ -0.92

Retrieved 100 of 5,963 RNA–protein pairs in 136.4 ms