RNA–Protein interactions for RNA: YCL025C

AGP1, Transcript of Low-affinity amino acid permease with broad substrate range, yeastyeast

Gene AGP1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AGP1YCL025C IFH1P39520 1085 aa15.39■□□□□ 0.05
AGP1YCL025C IKI3Q06706 1349 aaKnown RBP15.39■□□□□ 0.05
AGP1YCL025C DNF1P32660 1571 aa15.37■□□□□ 0.05
AGP1YCL025C SNT2P53127 1403 aa15.36■□□□□ 0.05
AGP1YCL025C NUP170P38181 1502 aa15.33■□□□□ 0.05
AGP1YCL025C RPA190P10964 1664 aaKnown RBP15.33■□□□□ 0.04
AGP1YCL025C TY3B-GQ99315 1547 aa15.32■□□□□ 0.04
AGP1YCL025C NTE1Q04958 1679 aa15.27■□□□□ 0.04
AGP1YCL025C SSM4P40318 1319 aa15.26■□□□□ 0.03
AGP1YCL025C MTC1P47018 478 aaKnown RBP15.25■□□□□ 0.03
AGP1YCL025C RPO21P04050 1733 aaKnown RBP15.23■□□□□ 0.03
AGP1YCL025C YBT1P32386 1661 aa15.18■□□□□ 0.02
AGP1YCL025C IRC20Q06554 1556 aa15.17■□□□□ 0.02
AGP1YCL025C GEA2P39993 1459 aaKnown RBP15.15■□□□□ 0.02
AGP1YCL025C NUP159P40477 1460 aa15.1■□□□□ 0.01
AGP1YCL025C RTT106P40161 455 aa15.09■□□□□ 0.01
AGP1YCL025C VPS15P22219 1454 aa15.09■□□□□ 0.01
AGP1YCL025C YRF1-1P0CX20 1796 aa15.03■□□□□ -0
AGP1YCL025C YRF1-5P0CX21 1796 aa15.03■□□□□ -0
AGP1YCL025C YRF1-8P0CX22 1796 aa15.03■□□□□ -0
AGP1YCL025C GDB1Q06625 1536 aa15.01□□□□□ -0.01
AGP1YCL025C CAT8P39113 1433 aa15.01□□□□□ -0.01
AGP1YCL025C SPO14P36126 1683 aa14.98□□□□□ -0.01
AGP1YCL025C PDR10P51533 1564 aa14.96□□□□□ -0.01
AGP1YCL025C ARO1P08566 1588 aaKnown RBP14.95□□□□□ -0.02
AGP1YCL025C PDR12Q02785 1511 aa14.95□□□□□ -0.02
AGP1YCL025C MET5P47169 1442 aa14.9□□□□□ -0.02
AGP1YCL025C MET10P39692 1035 aa14.88□□□□□ -0.03
AGP1YCL025C NUP157P40064 1391 aaKnown RBP14.87□□□□□ -0.03
AGP1YCL025C BUD3P25558 1636 aa14.85□□□□□ -0.03
AGP1YCL025C SRB8P25648 1427 aa14.85□□□□□ -0.03
AGP1YCL025C CKB1P43639 278 aa14.83□□□□□ -0.04
AGP1YCL025C YSP2Q06681 1438 aa14.75□□□□□ -0.05
AGP1YCL025C GCN2P15442 1659 aa14.69□□□□□ -0.06
AGP1YCL025C IQG1Q12280 1495 aa14.67□□□□□ -0.06
AGP1YCL025C BUD21Q08492 214 aaPredicted RBP14.62□□□□□ -0.07
AGP1YCL025C MMS1Q06211 1407 aa14.6□□□□□ -0.07
AGP1YCL025C SEC7P11075 2009 aaKnown RBP14.55□□□□□ -0.08
AGP1YCL025C BNR1P40450 1375 aa14.53□□□□□ -0.08
AGP1YCL025C YOR093CQ12275 1648 aa14.51□□□□□ -0.09
AGP1YCL025C LTE1P07866 1435 aa14.51□□□□□ -0.09
AGP1YCL025C POL5P39985 1022 aaKnown RBP14.49□□□□□ -0.09
AGP1YCL025C CHC1P22137 1653 aaKnown RBP14.46□□□□□ -0.09
AGP1YCL025C DOP1Q03921 1698 aa14.45□□□□□ -0.1
AGP1YCL025C PDR5P33302 1511 aaKnown RBP14.44□□□□□ -0.1
AGP1YCL025C NOP7P53261 605 aaKnown RBP14.41□□□□□ -0.1
AGP1YCL025C VMR1P38735 1592 aa14.41□□□□□ -0.1
AGP1YCL025C NSR1P27476 414 aaKnown RBP RIP-Chip data14.39□□□□□ -0.11not detected
AGP1YCL025C DRS2P39524 1355 aa14.38□□□□□ -0.11
AGP1YCL025C PDR11P40550 1411 aa14.38□□□□□ -0.11
AGP1YCL025C TRM3Q07527 1436 aa14.38□□□□□ -0.11
AGP1YCL025C BNI1P41832 1953 aa14.34□□□□□ -0.11
AGP1YCL025C BFR2Q06631 534 aaKnown RBP14.31□□□□□ -0.12
AGP1YCL025C NUP188P52593 1655 aaKnown RBP14.31□□□□□ -0.12
AGP1YCL025C PAF1P38351 445 aa14.3□□□□□ -0.12
AGP1YCL025C ITT1Q04638 464 aa14.29□□□□□ -0.12
AGP1YCL025C IML1P47170 1584 aa14.27□□□□□ -0.13
AGP1YCL025C RAV1P47104 1357 aa14.27□□□□□ -0.13
AGP1YCL025C DNF2Q12675 1612 aa14.25□□□□□ -0.13
AGP1YCL025C ORC1P54784 914 aaPredicted RBP14.23□□□□□ -0.13
AGP1YCL025C SPT7P35177 1332 aa14.23□□□□□ -0.13
AGP1YCL025C RTC1Q08281 1341 aa14.21□□□□□ -0.14
AGP1YCL025C NUP192P47054 1683 aa14.19□□□□□ -0.14
AGP1YCL025C TY3B-IQ7LHG5 1498 aaKnown RBP14.19□□□□□ -0.14
AGP1YCL025C SEC3P33332 1336 aaKnown RBP14.14□□□□□ -0.15
AGP1YCL025C TAF5P38129 798 aa14.13□□□□□ -0.15
AGP1YCL025C TYS1P36421 394 aaKnown RBP14.12□□□□□ -0.15
AGP1YCL025C MHP1P43638 1398 aa14.11□□□□□ -0.15
AGP1YCL025C ENP1P38333 483 aaKnown RBP14.11□□□□□ -0.15
AGP1YCL025C YLR419WQ06698 1435 aaKnown RBP14.06□□□□□ -0.16
AGP1YCL025C IPL1P38991 367 aa14.05□□□□□ -0.16
AGP1YCL025C PSD2P53037 1138 aaKnown RBP14.05□□□□□ -0.16
AGP1YCL025C LEU3P08638 886 aa14.04□□□□□ -0.16
AGP1YCL025C KIP3P53086 805 aaKnown RBP14.03□□□□□ -0.16
AGP1YCL025C ESL2P36168 1195 aa14.01□□□□□ -0.17
AGP1YCL025C RAD9P14737 1309 aa13.95□□□□□ -0.18
AGP1YCL025C NST1P53935 1240 aa13.94□□□□□ -0.18
AGP1YCL025C PDS5Q04264 1277 aa13.94□□□□□ -0.18
AGP1YCL025C URN1Q06525 465 aaKnown RBP13.94□□□□□ -0.18
AGP1YCL025C YAP3P38749 330 aa13.93□□□□□ -0.18
AGP1YCL025C BCK1Q01389 1478 aa13.91□□□□□ -0.18
AGP1YCL025C SPE2P21182 396 aa13.9□□□□□ -0.18
AGP1YCL025C ALD4P46367 519 aaKnown RBP13.87□□□□□ -0.19
AGP1YCL025C TAF8Q03750 510 aa13.87□□□□□ -0.19
AGP1YCL025C PRS1P32895 427 aaKnown RBP13.85□□□□□ -0.19
AGP1YCL025C NOP2P40991 618 aaKnown RBP13.85□□□□□ -0.19
AGP1YCL025C CAB1Q04430 367 aa13.85□□□□□ -0.19
AGP1YCL025C DNF3Q12674 1656 aa13.85□□□□□ -0.19
AGP1YCL025C HAP1P0CE41 1502 aa13.81□□□□□ -0.2
AGP1YCL025C RTG3P38165 486 aa13.77□□□□□ -0.21
AGP1YCL025C MLP1Q02455 1875 aaKnown RBP13.77□□□□□ -0.21
AGP1YCL025C KRE5P22023 1365 aa13.76□□□□□ -0.21
AGP1YCL025C CHZ1P40019 153 aaPredicted RBP13.74□□□□□ -0.21
AGP1YCL025C YML133CQ03099 1374 aa13.71□□□□□ -0.21
AGP1YCL025C YLL067CQ07888 1374 aa13.71□□□□□ -0.21
AGP1YCL025C YLL066CQ99208 1374 aa13.71□□□□□ -0.21
AGP1YCL025C FKH1P40466 484 aa13.7□□□□□ -0.22
AGP1YCL025C MRX12P47084 519 aa13.65□□□□□ -0.22
AGP1YCL025C RIA1P53893 1110 aa13.65□□□□□ -0.22
AGP1YCL025C CFT1Q06632 1357 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms