RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAF1YBR279W DCW1P36091 449 aa9.74□□□□□ -0.85
PAF1YBR279W DSF2P38213 736 aa9.73□□□□□ -0.85
PAF1YBR279W YBL029C-AQ3E756 94 aa9.72□□□□□ -0.85
PAF1YBR279W VNX1P42839 908 aa9.69□□□□□ -0.86
PAF1YBR279W YGR273CP53329 174 aa9.69□□□□□ -0.86
PAF1YBR279W MAM3Q12296 706 aa9.69□□□□□ -0.86
PAF1YBR279W RPN1P38764 993 aaKnown RBP9.68□□□□□ -0.86
PAF1YBR279W SPP1Q03012 353 aa9.67□□□□□ -0.86
PAF1YBR279W COX6P00427 148 aa9.66□□□□□ -0.86
PAF1YBR279W KIC1P38692 1080 aa9.66□□□□□ -0.86
PAF1YBR279W TIF11P38912 153 aaKnown RBP9.66□□□□□ -0.86
PAF1YBR279W VHR2P40041 505 aa9.66□□□□□ -0.86
PAF1YBR279W ULI1P43604 169 aa9.63□□□□□ -0.87
PAF1YBR279W UBP14P38237 781 aaKnown RBP9.61□□□□□ -0.87
PAF1YBR279W YEL023CP39992 682 aa9.61□□□□□ -0.87
PAF1YBR279W TRP5P00931 707 aaKnown RBP9.6□□□□□ -0.87
PAF1YBR279W YLR326WQ06170 240 aaKnown RBP9.6□□□□□ -0.87
PAF1YBR279W RAD54P32863 898 aa9.59□□□□□ -0.87
PAF1YBR279W SOL3P38858 249 aa9.59□□□□□ -0.87
PAF1YBR279W JIP4Q03361 876 aa9.59□□□□□ -0.87
PAF1YBR279W AI4P03878 556 aa9.58□□□□□ -0.88
PAF1YBR279W KEX1P09620 729 aa9.58□□□□□ -0.88
PAF1YBR279W PTC4P38089 393 aa9.58□□□□□ -0.88
PAF1YBR279W IES2P40154 320 aa9.58□□□□□ -0.88
PAF1YBR279W MPH3P0CE00 602 aa9.56□□□□□ -0.88
PAF1YBR279W YNR021WP53723 404 aaKnown RBP9.56□□□□□ -0.88
PAF1YBR279W YDR090CQ03193 310 aa9.55□□□□□ -0.88
PAF1YBR279W BUD31P25337 157 aaPredicted RBP9.54□□□□□ -0.88
PAF1YBR279W NST1P53935 1240 aa9.53□□□□□ -0.88
PAF1YBR279W RPP1BP10622 106 aaKnown RBP9.52□□□□□ -0.89
PAF1YBR279W YNL035CP53962 389 aaKnown RBP9.52□□□□□ -0.89
PAF1YBR279W DAN4P47179 1161 aa9.51□□□□□ -0.89
PAF1YBR279W IOC2Q12072 812 aa9.51□□□□□ -0.89
PAF1YBR279W PCS60P38137 543 aaKnown RBP RIP-Chip data9.5□□□□□ -0.89not detected
PAF1YBR279W NUP42P49686 430 aaKnown RBP9.49□□□□□ -0.89
PAF1YBR279W TFG1P41895 735 aaPredicted RBP9.48□□□□□ -0.89
PAF1YBR279W LDB19Q12502 818 aa9.48□□□□□ -0.89
PAF1YBR279W DIT2P21595 489 aa9.46□□□□□ -0.9
PAF1YBR279W RTG1P32607 177 aa9.45□□□□□ -0.9
PAF1YBR279W SEC61P32915 480 aa9.45□□□□□ -0.9
PAF1YBR279W ATF2P53296 535 aa9.45□□□□□ -0.9
PAF1YBR279W AIM7Q12156 149 aa9.44□□□□□ -0.9
PAF1YBR279W PSE1P32337 1089 aaKnown RBP9.42□□□□□ -0.9
PAF1YBR279W GLC3P32775 704 aa9.42□□□□□ -0.9
PAF1YBR279W ILV3P39522 585 aaKnown RBP9.42□□□□□ -0.9
PAF1YBR279W SLI15P38283 698 aa9.41□□□□□ -0.9
PAF1YBR279W PML39Q03760 334 aa9.38□□□□□ -0.91
PAF1YBR279W NCR1Q12200 1170 aa9.38□□□□□ -0.91
PAF1YBR279W KIN1P13185 1064 aa9.37□□□□□ -0.91
PAF1YBR279W ORC6P38826 435 aa9.36□□□□□ -0.91
PAF1YBR279W PEX29Q03370 554 aa9.35□□□□□ -0.91
PAF1YBR279W CSC1Q06538 782 aa9.35□□□□□ -0.91
PAF1YBR279W PEX21P50091 288 aa9.33□□□□□ -0.92
PAF1YBR279W YDL129WQ07555 291 aa9.32□□□□□ -0.92
PAF1YBR279W CLB5P30283 435 aa9.31□□□□□ -0.92
PAF1YBR279W DPL1Q05567 589 aa9.31□□□□□ -0.92
PAF1YBR279W FKH1P40466 484 aa9.3□□□□□ -0.92
PAF1YBR279W MID1P41821 548 aa9.3□□□□□ -0.92
PAF1YBR279W TFB4Q12004 338 aa9.3□□□□□ -0.92
PAF1YBR279W TEA1P47988 759 aa9.29□□□□□ -0.92
PAF1YBR279W HGH1P48362 394 aaKnown RBP9.29□□□□□ -0.92
PAF1YBR279W CDC73Q06697 393 aa9.29□□□□□ -0.92
PAF1YBR279W RGR1P19263 1082 aa9.28□□□□□ -0.92
PAF1YBR279W SIS1P25294 352 aaKnown RBP9.28□□□□□ -0.92
PAF1YBR279W MVP1P40959 511 aaKnown RBP9.28□□□□□ -0.92
PAF1YBR279W TAF7Q05021 590 aa9.28□□□□□ -0.92
PAF1YBR279W MPC54Q08550 464 aa9.27□□□□□ -0.93
PAF1YBR279W GAP1P19145 602 aaPredicted RBP9.26□□□□□ -0.93
PAF1YBR279W ISU2Q12056 156 aa9.24□□□□□ -0.93
PAF1YBR279W SAP30P38429 201 aa9.22□□□□□ -0.93
PAF1YBR279W YJL171CP46992 396 aa9.22□□□□□ -0.93
PAF1YBR279W NMA111P53920 997 aa9.21□□□□□ -0.94
PAF1YBR279W YPR109WQ06104 294 aa9.21□□□□□ -0.94
PAF1YBR279W AIR2Q12476 344 aaKnown RBP9.21□□□□□ -0.94
PAF1YBR279W TUM1Q08686 304 aaKnown RBP9.2□□□□□ -0.94
PAF1YBR279W SSA2P10592 639 aaKnown RBP9.18□□□□□ -0.94
PAF1YBR279W DMA2P53924 522 aa9.17□□□□□ -0.94
PAF1YBR279W BMT6Q12291 365 aa9.17□□□□□ -0.94
PAF1YBR279W ARH1P48360 493 aa9.16□□□□□ -0.94
PAF1YBR279W HAP5Q02516 242 aa9.16□□□□□ -0.94
PAF1YBR279W YMR196WQ04336 1088 aa9.16□□□□□ -0.94
PAF1YBR279W YRR1Q12172 810 aa9.16□□□□□ -0.94
PAF1YBR279W GUA1P38625 525 aaKnown RBP9.14□□□□□ -0.95
PAF1YBR279W CSN12P47130 423 aa9.14□□□□□ -0.95
PAF1YBR279W ELP4Q02884 456 aaKnown RBP9.14□□□□□ -0.95
PAF1YBR279W HPC2Q01448 625 aa9.13□□□□□ -0.95
PAF1YBR279W NPL4P33755 580 aa9.09□□□□□ -0.95
PAF1YBR279W BRL1P38770 471 aa9.09□□□□□ -0.95
PAF1YBR279W NIS1P53939 407 aa9.09□□□□□ -0.95
PAF1YBR279W GLN1P32288 370 aaKnown RBP9.08□□□□□ -0.96
PAF1YBR279W SPT23P35210 1082 aa9.07□□□□□ -0.96
PAF1YBR279W FPK1P53739 893 aa9.07□□□□□ -0.96
PAF1YBR279W BNI4P53858 892 aa9.07□□□□□ -0.96
PAF1YBR279W HST2P53686 357 aa9.06□□□□□ -0.96
PAF1YBR279W PRE3P38624 215 aa9.05□□□□□ -0.96
PAF1YBR279W MMP1Q12372 583 aa9.05□□□□□ -0.96
PAF1YBR279W SIT4P20604 311 aa9.04□□□□□ -0.96
PAF1YBR279W NUD1P32336 851 aa9.04□□□□□ -0.96
PAF1YBR279W PTC2P39966 464 aaKnown RBP9.04□□□□□ -0.96
PAF1YBR279W CHL1P22516 861 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms