RNA–Protein interactions for RNA: YBR173C

UMP1, Transcript of Chaperone required for correct maturation of the 20S proteasome, yeastyeast

Gene UMP1, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UMP1YBR173C JIP4Q03361 876 aa8.66□□□□□ -1.02
UMP1YBR173C LDB19Q12502 818 aa8.66□□□□□ -1.02
UMP1YBR173C DMA1P38823 416 aa8.64□□□□□ -1.03
UMP1YBR173C DCW1P36091 449 aa8.63□□□□□ -1.03
UMP1YBR173C YNL035CP53962 389 aaKnown RBP8.63□□□□□ -1.03
UMP1YBR173C FKH1P40466 484 aa8.62□□□□□ -1.03
UMP1YBR173C SEC61P32915 480 aa8.61□□□□□ -1.03
UMP1YBR173C SGS1P35187 1447 aa8.61□□□□□ -1.03
UMP1YBR173C PTC4P38089 393 aa8.59□□□□□ -1.03
UMP1YBR173C YEL023CP39992 682 aa8.58□□□□□ -1.04
UMP1YBR173C RTG1P32607 177 aa8.57□□□□□ -1.04
UMP1YBR173C TFG1P41895 735 aaPredicted RBP8.56□□□□□ -1.04
UMP1YBR173C AIR2Q12476 344 aaKnown RBP8.55□□□□□ -1.04
UMP1YBR173C YPR148CQ06523 435 aa8.54□□□□□ -1.04
UMP1YBR173C NCR1Q12200 1170 aa8.54□□□□□ -1.04
UMP1YBR173C YJL171CP46992 396 aa8.53□□□□□ -1.04
UMP1YBR173C DAN4P47179 1161 aa8.53□□□□□ -1.04
UMP1YBR173C TCB3Q03640 1545 aaKnown RBP8.52□□□□□ -1.05
UMP1YBR173C TY1B-DR4Q07793 1604 aa8.5□□□□□ -1.05
UMP1YBR173C AI4P03878 556 aa8.49□□□□□ -1.05
UMP1YBR173C YGR273CP53329 174 aa8.49□□□□□ -1.05
UMP1YBR173C MPH3P0CE00 602 aa8.47□□□□□ -1.05
UMP1YBR173C NST1P53935 1240 aa8.46□□□□□ -1.06
UMP1YBR173C BMT6Q12291 365 aa8.46□□□□□ -1.06
UMP1YBR173C SOL3P38858 249 aa8.45□□□□□ -1.06
UMP1YBR173C YDL129WQ07555 291 aa8.45□□□□□ -1.06
UMP1YBR173C SAS10Q12136 610 aaPredicted RBP8.45□□□□□ -1.06
UMP1YBR173C CKB1P43639 278 aa8.44□□□□□ -1.06
UMP1YBR173C SWR1Q05471 1514 aa8.44□□□□□ -1.06
UMP1YBR173C VPS70P47161 811 aa8.41□□□□□ -1.06
UMP1YBR173C REF2P42073 533 aaPredicted RBP8.39□□□□□ -1.07
UMP1YBR173C PML39Q03760 334 aa8.37□□□□□ -1.07
UMP1YBR173C MAK21Q12176 1025 aaKnown RBP8.37□□□□□ -1.07
UMP1YBR173C KEX1P09620 729 aa8.35□□□□□ -1.07
UMP1YBR173C UBP14P38237 781 aaKnown RBP8.34□□□□□ -1.07
UMP1YBR173C SAP30P38429 201 aa8.34□□□□□ -1.07
UMP1YBR173C YLR326WQ06170 240 aaKnown RBP8.33□□□□□ -1.08
UMP1YBR173C RPP1BP10622 106 aaKnown RBP8.32□□□□□ -1.08
UMP1YBR173C KIC1P38692 1080 aa8.32□□□□□ -1.08
UMP1YBR173C VHR2P40041 505 aa8.32□□□□□ -1.08
UMP1YBR173C DNA2P38859 1522 aa8.31□□□□□ -1.08
UMP1YBR173C RAD54P32863 898 aa8.31□□□□□ -1.08
UMP1YBR173C ILV3P39522 585 aaKnown RBP8.31□□□□□ -1.08
UMP1YBR173C PEX29Q03370 554 aa8.3□□□□□ -1.08
UMP1YBR173C HSL1P34244 1518 aa8.28□□□□□ -1.08
UMP1YBR173C SLI15P38283 698 aa8.27□□□□□ -1.09
UMP1YBR173C COX6P00427 148 aa8.26□□□□□ -1.09
UMP1YBR173C CHL1P22516 861 aaPredicted RBP8.26□□□□□ -1.09
UMP1YBR173C PRE3P38624 215 aa8.25□□□□□ -1.09
UMP1YBR173C ARH1P48360 493 aa8.25□□□□□ -1.09
UMP1YBR173C SPT6P23615 1451 aaKnown RBP8.25□□□□□ -1.09
UMP1YBR173C PBS2P08018 668 aa8.24□□□□□ -1.09
UMP1YBR173C PCS60P38137 543 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
UMP1YBR173C MID1P41821 548 aa8.24□□□□□ -1.09
UMP1YBR173C YDR090CQ03193 310 aa8.24□□□□□ -1.09
UMP1YBR173C DPL1Q05567 589 aa8.23□□□□□ -1.09
UMP1YBR173C KOG1P38873 1557 aa8.22□□□□□ -1.09
UMP1YBR173C MPC54Q08550 464 aa8.22□□□□□ -1.09
UMP1YBR173C ELP4Q02884 456 aaKnown RBP8.21□□□□□ -1.1
UMP1YBR173C HAP5Q02516 242 aa8.2□□□□□ -1.1
UMP1YBR173C SPA2P23201 1466 aaKnown RBP8.19□□□□□ -1.1
UMP1YBR173C DSF2P38213 736 aa8.19□□□□□ -1.1
UMP1YBR173C SPB4P25808 606 aaPredicted RBP8.18□□□□□ -1.1
UMP1YBR173C SPT23P35210 1082 aa8.17□□□□□ -1.1
UMP1YBR173C ISU2Q12056 156 aa8.17□□□□□ -1.1
UMP1YBR173C MAM3Q12296 706 aa8.17□□□□□ -1.1
UMP1YBR173C BNI4P53858 892 aa8.15□□□□□ -1.1
UMP1YBR173C NMA111P53920 997 aa8.15□□□□□ -1.1
UMP1YBR173C CSC1Q06538 782 aa8.15□□□□□ -1.1
UMP1YBR173C CDC73Q06697 393 aa8.12□□□□□ -1.11
UMP1YBR173C TFB4Q12004 338 aa8.12□□□□□ -1.11
UMP1YBR173C HIR3P47171 1648 aa8.11□□□□□ -1.11
UMP1YBR173C ORC6P38826 435 aa8.11□□□□□ -1.11
UMP1YBR173C PEX21P50091 288 aa8.11□□□□□ -1.11
UMP1YBR173C GAP1P19145 602 aaPredicted RBP8.09□□□□□ -1.11
UMP1YBR173C BCK2P33306 851 aa8.09□□□□□ -1.11
UMP1YBR173C PTC2P39966 464 aaKnown RBP8.09□□□□□ -1.11
UMP1YBR173C SSN2P38931 1420 aa8.09□□□□□ -1.11
UMP1YBR173C PSE1P32337 1089 aaKnown RBP8.07□□□□□ -1.12
UMP1YBR173C YML082WQ04533 649 aaKnown RBP8.07□□□□□ -1.12
UMP1YBR173C YDR344CQ05510 147 aa8.06□□□□□ -1.12
UMP1YBR173C IES2P40154 320 aa8.05□□□□□ -1.12
UMP1YBR173C CLB5P30283 435 aa8.03□□□□□ -1.12
UMP1YBR173C MVP1P40959 511 aaKnown RBP8.02□□□□□ -1.13
UMP1YBR173C LEU3P08638 886 aa8.01□□□□□ -1.13
UMP1YBR173C NUP42P49686 430 aaKnown RBP8.01□□□□□ -1.13
UMP1YBR173C XRN1P22147 1528 aaKnown RBP8.01□□□□□ -1.13
UMP1YBR173C RGR1P19263 1082 aa8□□□□□ -1.13
UMP1YBR173C VRP1P37370 817 aa8□□□□□ -1.13
UMP1YBR173C TUM1Q08686 304 aaKnown RBP7.98□□□□□ -1.13
UMP1YBR173C YRR1Q12172 810 aa7.98□□□□□ -1.13
UMP1YBR173C XDJ1P39102 459 aa7.97□□□□□ -1.13
UMP1YBR173C YNR021WP53723 404 aaKnown RBP7.96□□□□□ -1.14
UMP1YBR173C RAM1P22007 431 aa7.94□□□□□ -1.14
UMP1YBR173C YPR109WQ06104 294 aa7.94□□□□□ -1.14
UMP1YBR173C NPL4P33755 580 aa7.93□□□□□ -1.14
UMP1YBR173C ECM5Q03214 1411 aa7.93□□□□□ -1.14
UMP1YBR173C THO2P53552 1597 aaKnown RBP7.93□□□□□ -1.14
UMP1YBR173C DIT2P21595 489 aa7.92□□□□□ -1.14
UMP1YBR173C SAS4Q04003 481 aa7.92□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms