RNA–Protein interactions for RNA: YBR117C

TKL2, Transcript of Transketolase, yeastyeast

Gene TKL2, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TKL2YBR117C TY1B-NL1Q12112 1755 aa9.15□□□□□ -0.94
TKL2YBR117C TY1B-GR1Q12141 1755 aa9.15□□□□□ -0.94
TKL2YBR117C TY1B-BLQ12490 1755 aa9.15□□□□□ -0.94
TKL2YBR117C TRM732Q03496 1420 aa9.14□□□□□ -0.95
TKL2YBR117C CAB3P36076 571 aa9.14□□□□□ -0.95
TKL2YBR117C RPA190P10964 1664 aaKnown RBP9.12□□□□□ -0.95
TKL2YBR117C EBP2P36049 427 aaKnown RBP9.1□□□□□ -0.95
TKL2YBR117C SNT2P53127 1403 aa9.1□□□□□ -0.95
TKL2YBR117C NTE1Q04958 1679 aa9.09□□□□□ -0.95
TKL2YBR117C GEA1P47102 1408 aaPredicted RBP9.09□□□□□ -0.95
TKL2YBR117C IFH1P39520 1085 aa9.09□□□□□ -0.95
TKL2YBR117C RPO21P04050 1733 aaKnown RBP9.05□□□□□ -0.96
TKL2YBR117C IKI3Q06706 1349 aaKnown RBP9.05□□□□□ -0.96
TKL2YBR117C NUP159P40477 1460 aa9.04□□□□□ -0.96
TKL2YBR117C MET5P47169 1442 aa9.02□□□□□ -0.97
TKL2YBR117C NUP170P38181 1502 aa9.02□□□□□ -0.97
TKL2YBR117C TY3B-GQ99315 1547 aa9.02□□□□□ -0.97
TKL2YBR117C GEA2P39993 1459 aaKnown RBP9.01□□□□□ -0.97
TKL2YBR117C RTT106P40161 455 aa9□□□□□ -0.97
TKL2YBR117C URN1Q06525 465 aaKnown RBP8.99□□□□□ -0.97
TKL2YBR117C IRC20Q06554 1556 aa8.99□□□□□ -0.97
TKL2YBR117C YBT1P32386 1661 aa8.96□□□□□ -0.97
TKL2YBR117C LEO1P38439 464 aa8.96□□□□□ -0.98
TKL2YBR117C FAP1P53971 965 aa8.96□□□□□ -0.98
TKL2YBR117C YRF1-1P0CX20 1796 aa8.95□□□□□ -0.98
TKL2YBR117C YRF1-5P0CX21 1796 aa8.95□□□□□ -0.98
TKL2YBR117C YRF1-8P0CX22 1796 aa8.95□□□□□ -0.98
TKL2YBR117C VPS15P22219 1454 aa8.94□□□□□ -0.98
TKL2YBR117C SSM4P40318 1319 aa8.92□□□□□ -0.98
TKL2YBR117C CAT8P39113 1433 aa8.91□□□□□ -0.98
TKL2YBR117C MET10P39692 1035 aa8.91□□□□□ -0.98
TKL2YBR117C PDR12Q02785 1511 aa8.9□□□□□ -0.99
TKL2YBR117C SPO14P36126 1683 aa8.89□□□□□ -0.99
TKL2YBR117C SIS2P36024 562 aa8.88□□□□□ -0.99
TKL2YBR117C PDR10P51533 1564 aa8.87□□□□□ -0.99
TKL2YBR117C GDB1Q06625 1536 aa8.87□□□□□ -0.99
TKL2YBR117C NUP157P40064 1391 aaKnown RBP8.86□□□□□ -0.99
TKL2YBR117C DMA1P38823 416 aa8.85□□□□□ -0.99
TKL2YBR117C ARO1P08566 1588 aaKnown RBP8.84□□□□□ -0.99
TKL2YBR117C NSR1P27476 414 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
TKL2YBR117C LTE1P07866 1435 aa8.84□□□□□ -0.99
TKL2YBR117C CKB1P43639 278 aa8.8□□□□□ -1
TKL2YBR117C ITT1Q04638 464 aa8.8□□□□□ -1
TKL2YBR117C SRB8P25648 1427 aa8.79□□□□□ -1
TKL2YBR117C BUD3P25558 1636 aa8.76□□□□□ -1.01
TKL2YBR117C IQG1Q12280 1495 aa8.74□□□□□ -1.01
TKL2YBR117C DRS2P39524 1355 aa8.73□□□□□ -1.01
TKL2YBR117C BNI1P41832 1953 aa8.73□□□□□ -1.01
TKL2YBR117C YSP2Q06681 1438 aa8.73□□□□□ -1.01
TKL2YBR117C MMS1Q06211 1407 aa8.68□□□□□ -1.02
TKL2YBR117C NAP1P25293 417 aaKnown RBP8.68□□□□□ -1.02
TKL2YBR117C GCN2P15442 1659 aa8.67□□□□□ -1.02
TKL2YBR117C BUD21Q08492 214 aaPredicted RBP8.66□□□□□ -1.02
TKL2YBR117C DOP1Q03921 1698 aa8.63□□□□□ -1.03
TKL2YBR117C SEC7P11075 2009 aaKnown RBP8.63□□□□□ -1.03
TKL2YBR117C BNR1P40450 1375 aa8.63□□□□□ -1.03
TKL2YBR117C TRM3Q07527 1436 aa8.61□□□□□ -1.03
TKL2YBR117C AVT3P36062 692 aa8.61□□□□□ -1.03
TKL2YBR117C CHC1P22137 1653 aaKnown RBP8.61□□□□□ -1.03
TKL2YBR117C YPR148CQ06523 435 aa8.59□□□□□ -1.03
TKL2YBR117C YOR093CQ12275 1648 aa8.57□□□□□ -1.04
TKL2YBR117C IOC4Q04213 475 aa8.57□□□□□ -1.04
TKL2YBR117C AIM44Q99299 758 aa8.55□□□□□ -1.04
TKL2YBR117C PDR5P33302 1511 aaKnown RBP8.54□□□□□ -1.04
TKL2YBR117C YFR016CP43597 1233 aaKnown RBP8.51□□□□□ -1.05
TKL2YBR117C VMR1P38735 1592 aa8.51□□□□□ -1.05
TKL2YBR117C NOP7P53261 605 aaKnown RBP8.51□□□□□ -1.05
TKL2YBR117C RPS0BP46654 252 aaKnown RBP8.49□□□□□ -1.05
TKL2YBR117C NUP188P52593 1655 aaKnown RBP8.49□□□□□ -1.05
TKL2YBR117C ABP1P15891 592 aaKnown RBP8.47□□□□□ -1.05
TKL2YBR117C PAF1P38351 445 aa8.47□□□□□ -1.05
TKL2YBR117C DNF2Q12675 1612 aa8.47□□□□□ -1.05
TKL2YBR117C POL5P39985 1022 aaKnown RBP8.47□□□□□ -1.05
TKL2YBR117C YRB30P53107 440 aaPredicted RBP8.46□□□□□ -1.05
TKL2YBR117C IML1P47170 1584 aa8.46□□□□□ -1.05
TKL2YBR117C MNN4P36044 1178 aa8.46□□□□□ -1.06
TKL2YBR117C PDR11P40550 1411 aa8.46□□□□□ -1.06
TKL2YBR117C TYS1P36421 394 aaKnown RBP8.44□□□□□ -1.06
TKL2YBR117C RAV1P47104 1357 aa8.44□□□□□ -1.06
TKL2YBR117C PRY3P47033 881 aa8.43□□□□□ -1.06
TKL2YBR117C TCB2P48231 1178 aa8.42□□□□□ -1.06
TKL2YBR117C ENP1P38333 483 aaKnown RBP8.41□□□□□ -1.06
TKL2YBR117C YAP3P38749 330 aa8.41□□□□□ -1.06
TKL2YBR117C RTC1Q08281 1341 aa8.4□□□□□ -1.07
TKL2YBR117C IPL1P38991 367 aa8.39□□□□□ -1.07
TKL2YBR117C NUP192P47054 1683 aa8.35□□□□□ -1.07
TKL2YBR117C TY3B-IQ7LHG5 1498 aaKnown RBP8.34□□□□□ -1.07
TKL2YBR117C QCR6P00127 147 aa8.3□□□□□ -1.08
TKL2YBR117C TAF5P38129 798 aa8.3□□□□□ -1.08
TKL2YBR117C ORC1P54784 914 aaPredicted RBP8.3□□□□□ -1.08
TKL2YBR117C LEU3P08638 886 aa8.29□□□□□ -1.08
TKL2YBR117C ESL2P36168 1195 aa8.29□□□□□ -1.08
TKL2YBR117C MHP1P43638 1398 aa8.28□□□□□ -1.08
TKL2YBR117C SEC3P33332 1336 aaKnown RBP8.28□□□□□ -1.08
TKL2YBR117C DNF3Q12674 1656 aa8.28□□□□□ -1.08
TKL2YBR117C HAP1P0CE41 1502 aa8.28□□□□□ -1.08
TKL2YBR117C YLR419WQ06698 1435 aaKnown RBP8.27□□□□□ -1.09
TKL2YBR117C MAK10Q02197 733 aa8.26□□□□□ -1.09
TKL2YBR117C SPT7P35177 1332 aa8.26□□□□□ -1.09
TKL2YBR117C KIP3P53086 805 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms