RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W TY1B-GR1Q12141 1755 aa7.52□□□□□ -1.2
SIF2YBR103W TY1B-BLQ12490 1755 aa7.52□□□□□ -1.2
SIF2YBR103W TRM732Q03496 1420 aa7.51□□□□□ -1.21
SIF2YBR103W REB1P21538 810 aa7.5□□□□□ -1.21
SIF2YBR103W MYO4P32492 1471 aa7.49□□□□□ -1.21
SIF2YBR103W LTE1P07866 1435 aa7.49□□□□□ -1.21
SIF2YBR103W TSC11P40061 1430 aa7.49□□□□□ -1.21
SIF2YBR103W YTA7P40340 1379 aa7.49□□□□□ -1.21
SIF2YBR103W VTH1P40438 1549 aa7.48□□□□□ -1.21
SIF2YBR103W VTH2P40890 1549 aa7.48□□□□□ -1.21
SIF2YBR103W NTE1Q04958 1679 aa7.47□□□□□ -1.21
SIF2YBR103W YRF1-1P0CX20 1796 aa7.46□□□□□ -1.21
SIF2YBR103W YRF1-5P0CX21 1796 aa7.46□□□□□ -1.21
SIF2YBR103W YRF1-8P0CX22 1796 aa7.46□□□□□ -1.21
SIF2YBR103W SSP1P38871 571 aa7.46□□□□□ -1.21
SIF2YBR103W RPO21P04050 1733 aaKnown RBP7.45□□□□□ -1.22
SIF2YBR103W NUP159P40477 1460 aa7.45□□□□□ -1.22
SIF2YBR103W RIM101P33400 625 aa7.43□□□□□ -1.22
SIF2YBR103W BNI1P41832 1953 aa7.42□□□□□ -1.22
SIF2YBR103W GEA2P39993 1459 aaKnown RBP7.41□□□□□ -1.22
SIF2YBR103W SNQ2P32568 1501 aaKnown RBP7.4□□□□□ -1.22
SIF2YBR103W VPS15P22219 1454 aa7.39□□□□□ -1.23
SIF2YBR103W SNT2P53127 1403 aa7.39□□□□□ -1.23
SIF2YBR103W SPT21P35209 758 aa7.38□□□□□ -1.23
SIF2YBR103W STH1P32597 1359 aa7.36□□□□□ -1.23
SIF2YBR103W LEU3P08638 886 aa7.35□□□□□ -1.23
SIF2YBR103W PRI1P10363 409 aa7.34□□□□□ -1.23
SIF2YBR103W MLP2P40457 1679 aa7.33□□□□□ -1.24
SIF2YBR103W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
SIF2YBR103W PDR12Q02785 1511 aa7.31□□□□□ -1.24
SIF2YBR103W ITT1Q04638 464 aa7.3□□□□□ -1.24
SIF2YBR103W ULS1Q08562 1619 aa7.3□□□□□ -1.24
SIF2YBR103W DRS2P39524 1355 aa7.29□□□□□ -1.24
SIF2YBR103W SAS10Q12136 610 aaPredicted RBP7.28□□□□□ -1.24
SIF2YBR103W SPO14P36126 1683 aa7.28□□□□□ -1.24
SIF2YBR103W IRC20Q06554 1556 aa7.27□□□□□ -1.25
SIF2YBR103W MET10P39692 1035 aa7.27□□□□□ -1.25
SIF2YBR103W YAH1Q12184 172 aaKnown RBP7.27□□□□□ -1.25
SIF2YBR103W PDR15Q04182 1529 aaKnown RBP7.26□□□□□ -1.25
SIF2YBR103W NUP170P38181 1502 aa7.26□□□□□ -1.25
SIF2YBR103W GDB1Q06625 1536 aa7.24□□□□□ -1.25
SIF2YBR103W MMS1Q06211 1407 aa7.24□□□□□ -1.25
SIF2YBR103W OXP1P28273 1286 aa7.22□□□□□ -1.25
SIF2YBR103W RTT106P40161 455 aa7.21□□□□□ -1.26
SIF2YBR103W IQG1Q12280 1495 aa7.19□□□□□ -1.26
SIF2YBR103W DOP1Q03921 1698 aa7.18□□□□□ -1.26
SIF2YBR103W TRM3Q07527 1436 aa7.18□□□□□ -1.26
SIF2YBR103W YIL055CP40523 627 aaKnown RBP7.18□□□□□ -1.26
SIF2YBR103W BUD3P25558 1636 aa7.18□□□□□ -1.26
SIF2YBR103W DNF2Q12675 1612 aa7.18□□□□□ -1.26
SIF2YBR103W NUP157P40064 1391 aaKnown RBP7.17□□□□□ -1.26
SIF2YBR103W PDR10P51533 1564 aa7.17□□□□□ -1.26
SIF2YBR103W MIF2P35201 549 aa7.16□□□□□ -1.26
SIF2YBR103W YLR271WQ06152 274 aa7.16□□□□□ -1.26
SIF2YBR103W FAP1P53971 965 aa7.15□□□□□ -1.27
SIF2YBR103W CAT8P39113 1433 aa7.14□□□□□ -1.27
SIF2YBR103W GEA1P47102 1408 aaPredicted RBP7.14□□□□□ -1.27
SIF2YBR103W YBT1P32386 1661 aa7.13□□□□□ -1.27
SIF2YBR103W TY3B-GQ99315 1547 aa7.13□□□□□ -1.27
SIF2YBR103W MGA2P40578 1113 aa7.12□□□□□ -1.27
SIF2YBR103W AAD16Q02895 342 aa7.12□□□□□ -1.27
SIF2YBR103W SEC7P11075 2009 aaKnown RBP7.11□□□□□ -1.27
SIF2YBR103W ABP1P15891 592 aaKnown RBP7.11□□□□□ -1.27
SIF2YBR103W CHC1P22137 1653 aaKnown RBP7.1□□□□□ -1.27
SIF2YBR103W RPN1P38764 993 aaKnown RBP7.1□□□□□ -1.27
SIF2YBR103W ARO1P08566 1588 aaKnown RBP7.09□□□□□ -1.27
SIF2YBR103W IFH1P39520 1085 aa7.08□□□□□ -1.28
SIF2YBR103W DMA2P53924 522 aa7.06□□□□□ -1.28
SIF2YBR103W YSP2Q06681 1438 aa7.04□□□□□ -1.28
SIF2YBR103W RSM7P47150 247 aa7.03□□□□□ -1.28
SIF2YBR103W TSR3Q12094 313 aaKnown RBP7.03□□□□□ -1.28
SIF2YBR103W YOR093CQ12275 1648 aa7.02□□□□□ -1.29
SIF2YBR103W CST9Q06032 482 aa6.98□□□□□ -1.29
SIF2YBR103W BNR1P40450 1375 aa6.97□□□□□ -1.29
SIF2YBR103W YKR023WP36119 530 aaKnown RBP6.97□□□□□ -1.29
SIF2YBR103W DNF3Q12674 1656 aa6.96□□□□□ -1.3
SIF2YBR103W SRB8P25648 1427 aa6.96□□□□□ -1.3
SIF2YBR103W NOP2P40991 618 aaKnown RBP6.95□□□□□ -1.3
SIF2YBR103W CKB1P43639 278 aa6.95□□□□□ -1.3
SIF2YBR103W SPB4P25808 606 aaPredicted RBP6.94□□□□□ -1.3
SIF2YBR103W RLF2Q12495 606 aa6.94□□□□□ -1.3
SIF2YBR103W YFR006WP43590 535 aa6.92□□□□□ -1.3
SIF2YBR103W YAP3P38749 330 aa6.9□□□□□ -1.3
SIF2YBR103W PSD2P53037 1138 aaKnown RBP6.89□□□□□ -1.31
SIF2YBR103W HAP1P0CE41 1502 aa6.89□□□□□ -1.31
SIF2YBR103W IKI3Q06706 1349 aaKnown RBP6.88□□□□□ -1.31
SIF2YBR103W SET1P38827 1080 aaKnown RBP6.87□□□□□ -1.31
SIF2YBR103W URN1Q06525 465 aaKnown RBP6.87□□□□□ -1.31
SIF2YBR103W NUP188P52593 1655 aaKnown RBP6.86□□□□□ -1.31
SIF2YBR103W AI2P03876 854 aa6.86□□□□□ -1.31
SIF2YBR103W VPS70P47161 811 aa6.86□□□□□ -1.31
SIF2YBR103W HOP09932 586 aa6.85□□□□□ -1.31
SIF2YBR103W TFC8Q12308 588 aa6.84□□□□□ -1.31
SIF2YBR103W YPR148CQ06523 435 aa6.83□□□□□ -1.32
SIF2YBR103W BUD21Q08492 214 aaPredicted RBP6.83□□□□□ -1.32
SIF2YBR103W VMR1P38735 1592 aa6.82□□□□□ -1.32
SIF2YBR103W RAM2P29703 316 aa6.82□□□□□ -1.32
SIF2YBR103W CAB3P36076 571 aa6.82□□□□□ -1.32
SIF2YBR103W MAK10Q02197 733 aa6.8□□□□□ -1.32
SIF2YBR103W IML1P47170 1584 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms