RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C YNL035CP53962 389 aaKnown RBP10.74□□□□□ -0.69
RTG3YBL103C NOP53Q12080 455 aaKnown RBP10.74□□□□□ -0.69
RTG3YBL103C DMA1P38823 416 aa10.71□□□□□ -0.69
RTG3YBL103C YEL023CP39992 682 aa10.71□□□□□ -0.69
RTG3YBL103C JIP4Q03361 876 aa10.68□□□□□ -0.7
RTG3YBL103C DAN4P47179 1161 aa10.67□□□□□ -0.7
RTG3YBL103C NCR1Q12200 1170 aa10.67□□□□□ -0.7
RTG3YBL103C PTC4P38089 393 aa10.66□□□□□ -0.7
RTG3YBL103C SEC61P32915 480 aa10.65□□□□□ -0.7
RTG3YBL103C YJL171CP46992 396 aa10.65□□□□□ -0.7
RTG3YBL103C SOL3P38858 249 aa10.64□□□□□ -0.71
RTG3YBL103C NST1P53935 1240 aa10.61□□□□□ -0.71
RTG3YBL103C TFG1P41895 735 aaPredicted RBP10.57□□□□□ -0.72
RTG3YBL103C BMT6Q12291 365 aa10.57□□□□□ -0.72
RTG3YBL103C YGR273CP53329 174 aa10.55□□□□□ -0.72
RTG3YBL103C IFH1P39520 1085 aa10.51□□□□□ -0.73
RTG3YBL103C MPH3P0CE00 602 aa10.5□□□□□ -0.73
RTG3YBL103C AI4P03878 556 aa10.49□□□□□ -0.73
RTG3YBL103C ILV3P39522 585 aaKnown RBP10.49□□□□□ -0.73
RTG3YBL103C PML39Q03760 334 aa10.49□□□□□ -0.73
RTG3YBL103C YDL129WQ07555 291 aa10.49□□□□□ -0.73
RTG3YBL103C SAP30P38429 201 aa10.49□□□□□ -0.73
RTG3YBL103C YPR148CQ06523 435 aa10.49□□□□□ -0.73
RTG3YBL103C VPS70P47161 811 aa10.45□□□□□ -0.74
RTG3YBL103C MID1P41821 548 aa10.42□□□□□ -0.74
RTG3YBL103C VHR2P40041 505 aa10.42□□□□□ -0.74
RTG3YBL103C KEX1P09620 729 aa10.41□□□□□ -0.74
RTG3YBL103C UBP14P38237 781 aaKnown RBP10.4□□□□□ -0.74
RTG3YBL103C YLR326WQ06170 240 aaKnown RBP10.39□□□□□ -0.75
RTG3YBL103C RQC2Q12532 1038 aaKnown RBP10.39□□□□□ -0.75
RTG3YBL103C YDR344CQ05510 147 aa10.35□□□□□ -0.75
RTG3YBL103C SLI15P38283 698 aa10.34□□□□□ -0.75
RTG3YBL103C REF2P42073 533 aaPredicted RBP10.33□□□□□ -0.76
RTG3YBL103C SAS10Q12136 610 aaPredicted RBP10.33□□□□□ -0.76
RTG3YBL103C PEX29Q03370 554 aa10.3□□□□□ -0.76
RTG3YBL103C PCS60P38137 543 aaKnown RBP RIP-Chip data10.3□□□□□ -0.76 RIP-Chip
RTG3YBL103C RAD54P32863 898 aa10.29□□□□□ -0.76
RTG3YBL103C YDR090CQ03193 310 aa10.29□□□□□ -0.76
RTG3YBL103C PRE3P38624 215 aa10.27□□□□□ -0.77
RTG3YBL103C MPC54Q08550 464 aa10.26□□□□□ -0.77
RTG3YBL103C ELP4Q02884 456 aaKnown RBP10.25□□□□□ -0.77
RTG3YBL103C CHL1P22516 861 aaPredicted RBP10.24□□□□□ -0.77
RTG3YBL103C CKB1P43639 278 aa10.24□□□□□ -0.77
RTG3YBL103C ARH1P48360 493 aa10.23□□□□□ -0.77
RTG3YBL103C KIC1P38692 1080 aa10.22□□□□□ -0.77
RTG3YBL103C CDC73Q06697 393 aa10.21□□□□□ -0.78
RTG3YBL103C DPL1Q05567 589 aa10.2□□□□□ -0.78
RTG3YBL103C NMA111P53920 997 aa10.17□□□□□ -0.78
RTG3YBL103C HAP5Q02516 242 aa10.17□□□□□ -0.78
RTG3YBL103C COX6P00427 148 aa10.17□□□□□ -0.78
RTG3YBL103C PBS2P08018 668 aa10.17□□□□□ -0.78
RTG3YBL103C MAK21Q12176 1025 aaKnown RBP10.16□□□□□ -0.78
RTG3YBL103C SPT23P35210 1082 aa10.1□□□□□ -0.79
RTG3YBL103C ISU2Q12056 156 aa10.1□□□□□ -0.79
RTG3YBL103C RPP1BP10622 106 aaKnown RBP10.08□□□□□ -0.8
RTG3YBL103C SPB4P25808 606 aaPredicted RBP10.08□□□□□ -0.8
RTG3YBL103C BNI4P53858 892 aa10.07□□□□□ -0.8
RTG3YBL103C BCK2P33306 851 aa10.05□□□□□ -0.8
RTG3YBL103C DSF2P38213 736 aa10.04□□□□□ -0.8
RTG3YBL103C ORC6P38826 435 aa10.04□□□□□ -0.8
RTG3YBL103C PTC2P39966 464 aaKnown RBP10.04□□□□□ -0.8
RTG3YBL103C VRP1P37370 817 aa10.03□□□□□ -0.8
RTG3YBL103C MAM3Q12296 706 aa10.03□□□□□ -0.8
RTG3YBL103C GAP1P19145 602 aaPredicted RBP10.02□□□□□ -0.81
RTG3YBL103C PEX21P50091 288 aa9.99□□□□□ -0.81
RTG3YBL103C CSC1Q06538 782 aa9.99□□□□□ -0.81
RTG3YBL103C PDR1P12383 1068 aa9.98□□□□□ -0.81
RTG3YBL103C IES2P40154 320 aa9.98□□□□□ -0.81
RTG3YBL103C YML082WQ04533 649 aaKnown RBP9.98□□□□□ -0.81
RTG3YBL103C YRR1Q12172 810 aa9.96□□□□□ -0.82
RTG3YBL103C RAM1P22007 431 aa9.95□□□□□ -0.82
RTG3YBL103C TFB4Q12004 338 aa9.95□□□□□ -0.82
RTG3YBL103C MVP1P40959 511 aaKnown RBP9.94□□□□□ -0.82
RTG3YBL103C TUM1Q08686 304 aaKnown RBP9.94□□□□□ -0.82
RTG3YBL103C YPR015CQ12531 247 aa9.94□□□□□ -0.82
RTG3YBL103C RGR1P19263 1082 aa9.92□□□□□ -0.82
RTG3YBL103C NUP42P49686 430 aaKnown RBP9.91□□□□□ -0.82
RTG3YBL103C DIT2P21595 489 aa9.88□□□□□ -0.83
RTG3YBL103C YPR109WQ06104 294 aa9.88□□□□□ -0.83
RTG3YBL103C PSE1P32337 1089 aaKnown RBP9.87□□□□□ -0.83
RTG3YBL103C XDJ1P39102 459 aa9.87□□□□□ -0.83
RTG3YBL103C NUD1P32336 851 aa9.83□□□□□ -0.84
RTG3YBL103C STR2P47164 639 aa9.8□□□□□ -0.84
RTG3YBL103C ISM1P48526 1002 aa9.79□□□□□ -0.84
RTG3YBL103C BUD20Q08004 166 aaPredicted RBP9.78□□□□□ -0.84
RTG3YBL103C GYP1Q08484 637 aa9.78□□□□□ -0.84
RTG3YBL103C NPL4P33755 580 aa9.76□□□□□ -0.85
RTG3YBL103C CLB5P30283 435 aa9.72□□□□□ -0.85
RTG3YBL103C TEA1P47988 759 aa9.72□□□□□ -0.85
RTG3YBL103C PRT1P06103 763 aaKnown RBP9.72□□□□□ -0.85
RTG3YBL103C GCD11P32481 527 aaKnown RBP9.71□□□□□ -0.86
RTG3YBL103C YNR021WP53723 404 aaKnown RBP9.7□□□□□ -0.86
RTG3YBL103C GLC3P32775 704 aa9.69□□□□□ -0.86
RTG3YBL103C TY1A-DR4O74302 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-HP0C2I4 478 aaKnown RBP9.68□□□□□ -0.86
RTG3YBL103C TY1A-AP0CX57 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-PR1P0CX58 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-ORP0CX59 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-PR2P0CX60 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-DR5P0CX65 440 aa9.68□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms