RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeastyeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE1YBL031W YDL129WQ07555 291 aa9.25□□□□□ -0.93
SHE1YBL031W YEL023CP39992 682 aa9.22□□□□□ -0.93
SHE1YBL031W BCK2P33306 851 aa9.2□□□□□ -0.94
SHE1YBL031W PTC4P38089 393 aa9.2□□□□□ -0.94
SHE1YBL031W CHL1P22516 861 aaPredicted RBP9.19□□□□□ -0.94
SHE1YBL031W PRE3P38624 215 aa9.15□□□□□ -0.94
SHE1YBL031W GRE2Q12068 342 aaKnown RBP9.11□□□□□ -0.95
SHE1YBL031W MIF2P35201 549 aa9.1□□□□□ -0.95
SHE1YBL031W PML39Q03760 334 aa9.08□□□□□ -0.96
SHE1YBL031W ATH1P48016 1211 aa9.04□□□□□ -0.96
SHE1YBL031W VRP1P37370 817 aa9.03□□□□□ -0.96
SHE1YBL031W ELP4Q02884 456 aaKnown RBP9.03□□□□□ -0.96
SHE1YBL031W YDR344CQ05510 147 aa9.02□□□□□ -0.97
SHE1YBL031W MAK11P20484 414 aaKnown RBP8.97□□□□□ -0.97
SHE1YBL031W GUT1P32190 709 aa8.97□□□□□ -0.97
SHE1YBL031W PTC3P34221 468 aaKnown RBP8.97□□□□□ -0.97
SHE1YBL031W RAM2P29703 316 aa8.95□□□□□ -0.98
SHE1YBL031W EDS1P38073 919 aa8.95□□□□□ -0.98
SHE1YBL031W XDJ1P39102 459 aa8.94□□□□□ -0.98
SHE1YBL031W MID1P41821 548 aa8.94□□□□□ -0.98
SHE1YBL031W PEX29Q03370 554 aa8.9□□□□□ -0.98
SHE1YBL031W COQ8P27697 501 aa8.88□□□□□ -0.99
SHE1YBL031W ARH1P48360 493 aa8.87□□□□□ -0.99
SHE1YBL031W DPS1P04802 557 aaKnown RBP8.83□□□□□ -1
SHE1YBL031W SOL3P38858 249 aa8.82□□□□□ -1
SHE1YBL031W NST1P53935 1240 aa8.82□□□□□ -1
SHE1YBL031W SPT23P35210 1082 aa8.8□□□□□ -1
SHE1YBL031W MPH3P0CE00 602 aa8.78□□□□□ -1
SHE1YBL031W AI4P03878 556 aa8.77□□□□□ -1.01
SHE1YBL031W HAP5Q02516 242 aa8.75□□□□□ -1.01
SHE1YBL031W ILV3P39522 585 aaKnown RBP8.73□□□□□ -1.01
SHE1YBL031W PTC2P39966 464 aaKnown RBP8.7□□□□□ -1.02
SHE1YBL031W YGR273CP53329 174 aa8.68□□□□□ -1.02
SHE1YBL031W MPC54Q08550 464 aa8.68□□□□□ -1.02
SHE1YBL031W BNI4P53858 892 aa8.66□□□□□ -1.02
SHE1YBL031W DMA1P38823 416 aa8.65□□□□□ -1.02
SHE1YBL031W NMA111P53920 997 aa8.63□□□□□ -1.03
SHE1YBL031W YML082WQ04533 649 aaKnown RBP8.62□□□□□ -1.03
SHE1YBL031W SLI15P38283 698 aa8.6□□□□□ -1.03
SHE1YBL031W NOP53Q12080 455 aaKnown RBP8.6□□□□□ -1.03
SHE1YBL031W DPL1Q05567 589 aa8.57□□□□□ -1.04
SHE1YBL031W SRC1Q03707 834 aa8.53□□□□□ -1.04
SHE1YBL031W KEX1P09620 729 aa8.49□□□□□ -1.05
SHE1YBL031W RAS1P01119 309 aa8.47□□□□□ -1.05
SHE1YBL031W ISU2Q12056 156 aa8.47□□□□□ -1.05
SHE1YBL031W YPR015CQ12531 247 aa8.47□□□□□ -1.05
SHE1YBL031W GYP1Q08484 637 aa8.46□□□□□ -1.06
SHE1YBL031W CDC73Q06697 393 aa8.45□□□□□ -1.06
SHE1YBL031W RAM1P22007 431 aa8.4□□□□□ -1.06
SHE1YBL031W VHR2P40041 505 aa8.4□□□□□ -1.06
SHE1YBL031W SET1P38827 1080 aaKnown RBP8.39□□□□□ -1.07
SHE1YBL031W PDR1P12383 1068 aa8.37□□□□□ -1.07
SHE1YBL031W YLR326WQ06170 240 aaKnown RBP8.36□□□□□ -1.07
SHE1YBL031W UBP14P38237 781 aaKnown RBP8.35□□□□□ -1.07
SHE1YBL031W AMS1P22855 1083 aa8.33□□□□□ -1.08
SHE1YBL031W PCS60P38137 543 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
SHE1YBL031W RAD54P32863 898 aa8.32□□□□□ -1.08
SHE1YBL031W RPP1BP10622 106 aaKnown RBP8.3□□□□□ -1.08
SHE1YBL031W TRK1P12685 1235 aa8.28□□□□□ -1.08
SHE1YBL031W SAS4Q04003 481 aa8.28□□□□□ -1.08
SHE1YBL031W RGA1P39083 1007 aa8.25□□□□□ -1.09
SHE1YBL031W SDH2P21801 266 aa8.23□□□□□ -1.09
SHE1YBL031W KIC1P38692 1080 aa8.23□□□□□ -1.09
SHE1YBL031W PEX21P50091 288 aa8.23□□□□□ -1.09
SHE1YBL031W RGA2Q06407 1009 aa8.23□□□□□ -1.09
SHE1YBL031W YEL077CQ3E7X8 1277 aa8.23□□□□□ -1.09
SHE1YBL031W YRR1Q12172 810 aa8.21□□□□□ -1.1
SHE1YBL031W MRF1P30775 413 aaPredicted RBP8.2□□□□□ -1.1
SHE1YBL031W BUD20Q08004 166 aaPredicted RBP8.17□□□□□ -1.1
SHE1YBL031W SAS10Q12136 610 aaPredicted RBP8.17□□□□□ -1.1
SHE1YBL031W PRT1P06103 763 aaKnown RBP8.15□□□□□ -1.1
SHE1YBL031W YDR090CQ03193 310 aa8.15□□□□□ -1.1
SHE1YBL031W TUM1Q08686 304 aaKnown RBP8.13□□□□□ -1.11
SHE1YBL031W ERG12P07277 443 aa8.12□□□□□ -1.11
SHE1YBL031W STR2P47164 639 aa8.11□□□□□ -1.11
SHE1YBL031W ISM1P48526 1002 aa8.11□□□□□ -1.11
SHE1YBL031W NUD1P32336 851 aa8.1□□□□□ -1.11
SHE1YBL031W NPL4P33755 580 aa8.1□□□□□ -1.11
SHE1YBL031W IFH1P39520 1085 aa8.1□□□□□ -1.11
SHE1YBL031W CSC1Q06538 782 aa8.08□□□□□ -1.12
SHE1YBL031W TFB4Q12004 338 aa8.07□□□□□ -1.12
SHE1YBL031W LEO1P38439 464 aa8.06□□□□□ -1.12
SHE1YBL031W LEU3P08638 886 aa8.05□□□□□ -1.12
SHE1YBL031W GCD11P32481 527 aaKnown RBP8.05□□□□□ -1.12
SHE1YBL031W REF2P42073 533 aaPredicted RBP8.05□□□□□ -1.12
SHE1YBL031W GAP1P19145 602 aaPredicted RBP8.04□□□□□ -1.12
SHE1YBL031W SPT16P32558 1035 aaKnown RBP8.03□□□□□ -1.12
SHE1YBL031W AIR1P40507 360 aaKnown RBP8.03□□□□□ -1.12
SHE1YBL031W CST6P40535 587 aa8.02□□□□□ -1.13
SHE1YBL031W GAR1P28007 205 aaKnown RBP8□□□□□ -1.13
SHE1YBL031W CLA4P48562 842 aa8□□□□□ -1.13
SHE1YBL031W GBP2P25555 427 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
SHE1YBL031W BRE2P43132 505 aa7.99□□□□□ -1.13
SHE1YBL031W FRK1Q03002 865 aaPredicted RBP7.99□□□□□ -1.13
SHE1YBL031W GCR2Q01722 534 aa7.98□□□□□ -1.13
SHE1YBL031W ORC6P38826 435 aa7.97□□□□□ -1.13
SHE1YBL031W VPS70P47161 811 aa7.97□□□□□ -1.13
SHE1YBL031W TAF7Q05021 590 aa7.97□□□□□ -1.13
SHE1YBL031W SEC2P17065 759 aa7.96□□□□□ -1.14
SHE1YBL031W TY1A-DR4O74302 440 aa7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms