RNA–Protein interactions for RNA: YBL005W-A

YBL005W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBL005W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBL005W-AYBL005W-A DCW1P36091 449 aa8.28□□□□□ -1.08
YBL005W-AYBL005W-A YEL023CP39992 682 aa8.27□□□□□ -1.09
YBL005W-AYBL005W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data8.26□□□□□ -1.09not detected
YBL005W-AYBL005W-A DPS1P04802 557 aaKnown RBP8.25□□□□□ -1.09
YBL005W-AYBL005W-A CST9Q06032 482 aa8.25□□□□□ -1.09
YBL005W-AYBL005W-A RGA2Q06407 1009 aa8.25□□□□□ -1.09
YBL005W-AYBL005W-A SSP1P38871 571 aa8.2□□□□□ -1.1
YBL005W-AYBL005W-A ELP4Q02884 456 aaKnown RBP8.2□□□□□ -1.1
YBL005W-AYBL005W-A YDR344CQ05510 147 aa8.18□□□□□ -1.1
YBL005W-AYBL005W-A RCR1P38212 213 aa8.16□□□□□ -1.1
YBL005W-AYBL005W-A PML39Q03760 334 aa8.14□□□□□ -1.11
YBL005W-AYBL005W-A MGA2P40578 1113 aa8.09□□□□□ -1.11
YBL005W-AYBL005W-A RGA1P39083 1007 aa8.05□□□□□ -1.12
YBL005W-AYBL005W-A ARH1P48360 493 aa8.03□□□□□ -1.12
YBL005W-AYBL005W-A SRC1Q03707 834 aa8.01□□□□□ -1.13
YBL005W-AYBL005W-A GRE2Q12068 342 aaKnown RBP8.01□□□□□ -1.13
YBL005W-AYBL005W-A MID1P41821 548 aa7.97□□□□□ -1.13
YBL005W-AYBL005W-A SPT23P35210 1082 aa7.96□□□□□ -1.14
YBL005W-AYBL005W-A PEX29Q03370 554 aa7.91□□□□□ -1.14
YBL005W-AYBL005W-A ATH1P48016 1211 aa7.9□□□□□ -1.14
YBL005W-AYBL005W-A GUT1P32190 709 aa7.86□□□□□ -1.15
YBL005W-AYBL005W-A MIF2P35201 549 aa7.85□□□□□ -1.15
YBL005W-AYBL005W-A HAP5Q02516 242 aa7.85□□□□□ -1.15
YBL005W-AYBL005W-A PTC2P39966 464 aaKnown RBP7.81□□□□□ -1.16
YBL005W-AYBL005W-A BNI4P53858 892 aa7.81□□□□□ -1.16
YBL005W-AYBL005W-A NST1P53935 1240 aa7.8□□□□□ -1.16
YBL005W-AYBL005W-A YML082WQ04533 649 aaKnown RBP7.8□□□□□ -1.16
YBL005W-AYBL005W-A PTC3P34221 468 aaKnown RBP7.79□□□□□ -1.16
YBL005W-AYBL005W-A EDS1P38073 919 aa7.78□□□□□ -1.16
YBL005W-AYBL005W-A RAS1P01119 309 aa7.76□□□□□ -1.17
YBL005W-AYBL005W-A MPH3P0CE00 602 aa7.75□□□□□ -1.17
YBL005W-AYBL005W-A AI4P03878 556 aa7.74□□□□□ -1.17
YBL005W-AYBL005W-A SOL3P38858 249 aa7.74□□□□□ -1.17
YBL005W-AYBL005W-A RAM2P29703 316 aa7.71□□□□□ -1.18
YBL005W-AYBL005W-A MAK11P20484 414 aaKnown RBP7.7□□□□□ -1.18
YBL005W-AYBL005W-A MPC54Q08550 464 aa7.69□□□□□ -1.18
YBL005W-AYBL005W-A RQC2Q12532 1038 aaKnown RBP7.69□□□□□ -1.18
YBL005W-AYBL005W-A ILV3P39522 585 aaKnown RBP7.67□□□□□ -1.18
YBL005W-AYBL005W-A NMA111P53920 997 aa7.66□□□□□ -1.18
YBL005W-AYBL005W-A TRK1P12685 1235 aa7.64□□□□□ -1.19
YBL005W-AYBL005W-A COQ8P27697 501 aa7.6□□□□□ -1.19
YBL005W-AYBL005W-A AMS1P22855 1083 aa7.56□□□□□ -1.2
YBL005W-AYBL005W-A DPL1Q05567 589 aa7.56□□□□□ -1.2
YBL005W-AYBL005W-A YPR015CQ12531 247 aa7.56□□□□□ -1.2
YBL005W-AYBL005W-A GYP1Q08484 637 aa7.55□□□□□ -1.2
YBL005W-AYBL005W-A YGR273CP53329 174 aa7.54□□□□□ -1.2
YBL005W-AYBL005W-A YPL062WQ02781 134 aa7.53□□□□□ -1.2
YBL005W-AYBL005W-A SLI15P38283 698 aa7.52□□□□□ -1.2
YBL005W-AYBL005W-A RAM1P22007 431 aa7.49□□□□□ -1.21
YBL005W-AYBL005W-A DMA1P38823 416 aa7.48□□□□□ -1.21
YBL005W-AYBL005W-A ISU2Q12056 156 aa7.47□□□□□ -1.21
YBL005W-AYBL005W-A SAS4Q04003 481 aa7.42□□□□□ -1.22
YBL005W-AYBL005W-A YEL077CQ3E7X8 1277 aa7.4□□□□□ -1.22
YBL005W-AYBL005W-A SDH2P21801 266 aa7.39□□□□□ -1.23
YBL005W-AYBL005W-A NOP53Q12080 455 aaKnown RBP7.39□□□□□ -1.23
YBL005W-AYBL005W-A GBP2P25555 427 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
YBL005W-AYBL005W-A PDR1P12383 1068 aa7.35□□□□□ -1.23
YBL005W-AYBL005W-A GAR1P28007 205 aaKnown RBP7.35□□□□□ -1.23
YBL005W-AYBL005W-A CDC73Q06697 393 aa7.35□□□□□ -1.23
YBL005W-AYBL005W-A MRF1P30775 413 aaPredicted RBP7.32□□□□□ -1.24
YBL005W-AYBL005W-A KEX1P09620 729 aa7.31□□□□□ -1.24
YBL005W-AYBL005W-A BRE2P43132 505 aa7.29□□□□□ -1.24
YBL005W-AYBL005W-A GCR2Q01722 534 aa7.29□□□□□ -1.24
YBL005W-AYBL005W-A AIR1P40507 360 aaKnown RBP7.22□□□□□ -1.25
YBL005W-AYBL005W-A YLR326WQ06170 240 aaKnown RBP7.21□□□□□ -1.26
YBL005W-AYBL005W-A ERG12P07277 443 aa7.2□□□□□ -1.26
YBL005W-AYBL005W-A UBP14P38237 781 aaKnown RBP7.2□□□□□ -1.26
YBL005W-AYBL005W-A PRT1P06103 763 aaKnown RBP7.19□□□□□ -1.26
YBL005W-AYBL005W-A BUD20Q08004 166 aaPredicted RBP7.19□□□□□ -1.26
YBL005W-AYBL005W-A RPP1BP10622 106 aaKnown RBP7.17□□□□□ -1.26
YBL005W-AYBL005W-A PCS60P38137 543 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
YBL005W-AYBL005W-A SET1P38827 1080 aaKnown RBP7.16□□□□□ -1.26
YBL005W-AYBL005W-A CLA4P48562 842 aa7.15□□□□□ -1.26
YBL005W-AYBL005W-A VHR2P40041 505 aa7.14□□□□□ -1.27
YBL005W-AYBL005W-A CST6P40535 587 aa7.12□□□□□ -1.27
YBL005W-AYBL005W-A SAS10Q12136 610 aaPredicted RBP7.12□□□□□ -1.27
YBL005W-AYBL005W-A RAD54P32863 898 aa7.1□□□□□ -1.27
YBL005W-AYBL005W-A IFH1P39520 1085 aa7.1□□□□□ -1.27
YBL005W-AYBL005W-A YRR1Q12172 810 aa7.1□□□□□ -1.27
YBL005W-AYBL005W-A MET22P32179 357 aa7.09□□□□□ -1.27
YBL005W-AYBL005W-A STR2P47164 639 aa7.07□□□□□ -1.28
YBL005W-AYBL005W-A PEX21P50091 288 aa7.07□□□□□ -1.28
YBL005W-AYBL005W-A ISM1P48526 1002 aa7.06□□□□□ -1.28
YBL005W-AYBL005W-A YPR148CQ06523 435 aa7.04□□□□□ -1.28
YBL005W-AYBL005W-A LAM6Q08001 693 aa7.04□□□□□ -1.28
YBL005W-AYBL005W-A ENV9Q08651 330 aa7.04□□□□□ -1.28
YBL005W-AYBL005W-A CDC4P07834 779 aa7.03□□□□□ -1.28
YBL005W-AYBL005W-A FRK1Q03002 865 aaPredicted RBP7.03□□□□□ -1.28
YBL005W-AYBL005W-A YDR090CQ03193 310 aa7.03□□□□□ -1.28
YBL005W-AYBL005W-A SPT16P32558 1035 aaKnown RBP7.02□□□□□ -1.28
YBL005W-AYBL005W-A GAP1P19145 602 aaPredicted RBP7.01□□□□□ -1.29
YBL005W-AYBL005W-A NUD1P32336 851 aa7.01□□□□□ -1.29
YBL005W-AYBL005W-A NPL4P33755 580 aa7.01□□□□□ -1.29
YBL005W-AYBL005W-A YDR444WQ04093 687 aa7.01□□□□□ -1.29
YBL005W-AYBL005W-A GCD11P32481 527 aaKnown RBP6.99□□□□□ -1.29
YBL005W-AYBL005W-A CKB1P43639 278 aa6.99□□□□□ -1.29
YBL005W-AYBL005W-A TUM1Q08686 304 aaKnown RBP6.99□□□□□ -1.29
YBL005W-AYBL005W-A VPS70P47161 811 aa6.98□□□□□ -1.29
YBL005W-AYBL005W-A BDP1P46678 594 aa6.95□□□□□ -1.3
YBL005W-AYBL005W-A TFB4Q12004 338 aa6.95□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms