RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 PRXQ9BXM0 1461 aa22.05■■□□□ 1.12
LINC02228-204ENST00000642115 MYT1LQ9UL68 1186 aa22.02■■□□□ 1.11
LINC02228-204ENST00000642115 TOP2BQ02880 1626 aa22■■□□□ 1.11
LINC02228-204ENST00000642115 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
LINC02228-204ENST00000642115 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
LINC02228-204ENST00000642115 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
LINC02228-204ENST00000642115 ANP32CO43423 234 aa21.96■■□□□ 1.11
LINC02228-204ENST00000642115 ARHGAP35Q9NRY4 1499 aa21.94■■□□□ 1.1
LINC02228-204ENST00000642115 ERICH3Q5RHP9 1530 aa21.93■■□□□ 1.1
LINC02228-204ENST00000642115 IRX6P78412 446 aaPredicted RBP21.93■■□□□ 1.1
LINC02228-204ENST00000642115 SETD5Q9C0A6 1442 aa21.91■■□□□ 1.1
LINC02228-204ENST00000642115 WDR97A6NE52 1622 aa21.9■■□□□ 1.1
LINC02228-204ENST00000642115 PPP1R15AO75807 674 aaPredicted RBP21.9■■□□□ 1.1
LINC02228-204ENST00000642115 MAPKBP1O60336 1514 aa21.89■■□□□ 1.1
LINC02228-204ENST00000642115 SALL2Q9Y467 1007 aaPredicted RBP21.89■■□□□ 1.09
LINC02228-204ENST00000642115 CUX2O14529 1486 aa21.86■■□□□ 1.09
LINC02228-204ENST00000642115 PHLDB1Q86UU1 1377 aa21.85■■□□□ 1.09
LINC02228-204ENST00000642115 NBR1Q14596 966 aa21.84■■□□□ 1.09
LINC02228-204ENST00000642115 CUX1P39880 1505 aa21.84■■□□□ 1.09
LINC02228-204ENST00000642115 CCER2I3L3R5 266 aa21.83■■□□□ 1.08
LINC02228-204ENST00000642115 HNRNPUQ00839 825 aaKnown RBP eCLIP21.79■■□□□ 1.08
LINC02228-204ENST00000642115 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.08
LINC02228-204ENST00000642115 CCDC136Q96JN2 1154 aa21.76■■□□□ 1.07
LINC02228-204ENST00000642115 TONSLQ96HA7 1378 aa21.74■■□□□ 1.07
LINC02228-204ENST00000642115 IGF1RP08069 1367 aa21.73■■□□□ 1.07
LINC02228-204ENST00000642115 PAK3O75914 559 aaPredicted RBP21.73■■□□□ 1.07
LINC02228-204ENST00000642115 NOP58Q9Y2X3 529 aaKnown RBP21.72■■□□□ 1.07
LINC02228-204ENST00000642115 ERICH6BQ5W0A0 696 aa21.72■■□□□ 1.07
LINC02228-204ENST00000642115 CARMIL1Q5VZK9 1371 aa21.71■■□□□ 1.07
LINC02228-204ENST00000642115 LRRC9Q6ZRR7 1453 aa21.7■■□□□ 1.06
LINC02228-204ENST00000642115 TIAM1Q13009 1591 aa21.67■■□□□ 1.06
LINC02228-204ENST00000642115 IL27Q8NEV9 243 aa21.66■■□□□ 1.06
LINC02228-204ENST00000642115 PPP4R2Q9NY27 417 aa21.64■■□□□ 1.06
LINC02228-204ENST00000642115 TIMELESSQ9UNS1 1208 aa21.63■■□□□ 1.05
LINC02228-204ENST00000642115 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
LINC02228-204ENST00000642115 CNGB1Q14028 1251 aaPredicted RBP21.63■■□□□ 1.05
LINC02228-204ENST00000642115 RTN4Q9NQC3 1192 aaKnown RBP21.63■■□□□ 1.05
LINC02228-204ENST00000642115 FHOD3Q2V2M9 1422 aa21.61■■□□□ 1.05
LINC02228-204ENST00000642115 B4GALNT3Q6L9W6 998 aa21.6■■□□□ 1.05
LINC02228-204ENST00000642115 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.58■■□□□ 1.05
LINC02228-204ENST00000642115 CHIC2Q9UKJ5 165 aa21.56■■□□□ 1.04
LINC02228-204ENST00000642115 FAM9BQ8IZU0 186 aa21.55■■□□□ 1.04
LINC02228-204ENST00000642115 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
LINC02228-204ENST00000642115 CFTRP13569 1480 aa21.53■■□□□ 1.04
LINC02228-204ENST00000642115 RTL5Q5HYW3 569 aaPredicted RBP21.52■■□□□ 1.04
LINC02228-204ENST00000642115 RRP7BPQ9NSQ0 103 aa21.52■■□□□ 1.04
LINC02228-204ENST00000642115 CCDC184Q52MB2 194 aa21.51■■□□□ 1.03
LINC02228-204ENST00000642115 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
LINC02228-204ENST00000642115 HSPA5P11021 654 aaKnown RBP21.49■■□□□ 1.03
LINC02228-204ENST00000642115 UBE2Q2Q8WVN8 375 aa21.48■■□□□ 1.03
LINC02228-204ENST00000642115 SENP3-EIF4A1A0A087X0R7 540 aa21.48■■□□□ 1.03
LINC02228-204ENST00000642115 MTUS2Q5JR59 1369 aa21.48■■□□□ 1.03
LINC02228-204ENST00000642115 PCF11O94913 1555 aaKnown RBP21.46■■□□□ 1.03
LINC02228-204ENST00000642115 CC2D2AQ9P2K1 1620 aa21.46■■□□□ 1.03
LINC02228-204ENST00000642115 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.03
LINC02228-204ENST00000642115 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.02
LINC02228-204ENST00000642115 MAP3K1Q13233 1512 aa21.45■■□□□ 1.02
LINC02228-204ENST00000642115 CCDC18Q5T9S5 1454 aa21.45■■□□□ 1.02
LINC02228-204ENST00000642115 WASHC2AQ641Q2 1341 aa21.44■■□□□ 1.02
LINC02228-204ENST00000642115 ARID3CA6NKF2 412 aa21.43■■□□□ 1.02
LINC02228-204ENST00000642115 IPO9Q96P70 1041 aaKnown RBP21.43■■□□□ 1.02
LINC02228-204ENST00000642115 FOXD1Q16676 465 aa21.42■■□□□ 1.02
LINC02228-204ENST00000642115 PTPRKQ15262 1439 aa21.41■■□□□ 1.02
LINC02228-204ENST00000642115 MRS2Q9HD23 443 aa21.41■■□□□ 1.02
LINC02228-204ENST00000642115 FGD6Q6ZV73 1430 aa21.4■■□□□ 1.02
LINC02228-204ENST00000642115 POLR3GLQ9BT43 218 aa21.39■■□□□ 1.02
LINC02228-204ENST00000642115 ZBTB47Q9UFB7 747 aaPredicted RBP21.39■■□□□ 1.02
LINC02228-204ENST00000642115 EIF4G2P78344 907 aaKnown RBP eCLIP21.39■■□□□ 1.01
LINC02228-204ENST00000642115 ANP32AP39687 249 aaKnown RBP21.38■■□□□ 1.01
LINC02228-204ENST00000642115 UACAQ9BZF9 1416 aa21.35■■□□□ 1.01
LINC02228-204ENST00000642115 AQRO60306 1485 aaKnown RBP eCLIP21.35■■□□□ 1.01
LINC02228-204ENST00000642115 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
LINC02228-204ENST00000642115 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
LINC02228-204ENST00000642115 C11orf95C9JLR9 678 aaPredicted RBP21.33■■□□□ 1.01
LINC02228-204ENST00000642115 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
LINC02228-204ENST00000642115 L3MBTL2Q969R5 705 aa21.3■■□□□ 1
LINC02228-204ENST00000642115 HFM1A2PYH4 1435 aa21.29■■□□□ 1
LINC02228-204ENST00000642115 NAIPQ13075 1403 aa21.28■■□□□ 1
LINC02228-204ENST00000642115 FYCO1Q9BQS8 1478 aa21.28■■□□□ 1
LINC02228-204ENST00000642115 PRKRIP1Q9H875 184 aaPredicted RBP21.28■■□□□ 1
LINC02228-204ENST00000642115 CFAP43Q8NDM7 1665 aa21.26■□□□□ 0.99
LINC02228-204ENST00000642115 NESP48681 1621 aa21.26■□□□□ 0.99
LINC02228-204ENST00000642115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.25■□□□□ 0.99
LINC02228-204ENST00000642115 FMN1Q68DA7 1419 aa21.23■□□□□ 0.99
LINC02228-204ENST00000642115 ZNF326Q5BKZ1 582 aaKnown RBP21.23■□□□□ 0.99
LINC02228-204ENST00000642115 MPHOSPH9Q99550 1183 aa21.22■□□□□ 0.99
LINC02228-204ENST00000642115 LAS1LQ9Y4W2 734 aaKnown RBP21.22■□□□□ 0.99
LINC02228-204ENST00000642115 NEFMP07197 916 aa21.21■□□□□ 0.99
LINC02228-204ENST00000642115 EIF5BO60841 1220 aaKnown RBP21.21■□□□□ 0.99
LINC02228-204ENST00000642115 PTPN23Q9H3S7 1636 aa21.2■□□□□ 0.99
LINC02228-204ENST00000642115 NCOA2Q15596 1464 aa21.2■□□□□ 0.98
LINC02228-204ENST00000642115 BRPF3Q9ULD4 1205 aa21.18■□□□□ 0.98
LINC02228-204ENST00000642115 MYOM3Q5VTT5 1437 aa21.17■□□□□ 0.98
LINC02228-204ENST00000642115 ZBED9Q6R2W3 1325 aa21.17■□□□□ 0.98
LINC02228-204ENST00000642115 CNTLNQ9NXG0 1405 aa21.17■□□□□ 0.98
LINC02228-204ENST00000642115 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
LINC02228-204ENST00000642115 WASHC2CQ9Y4E1 1318 aa21.17■□□□□ 0.98
LINC02228-204ENST00000642115 NBPF8Q3BBV2 869 aa21.16■□□□□ 0.98
LINC02228-204ENST00000642115 NPM2Q86SE8 214 aaKnown RBP21.16■□□□□ 0.98
LINC02228-204ENST00000642115 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms