RNA–Protein interactions for RNA: ENST00000641991.1

CASC19-272, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,360 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-272ENST00000641991 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
CASC19-272ENST00000641991 VPS8Q8N3P4 1428 aa18.27■□□□□ 0.52
CASC19-272ENST00000641991 RANGAP1P46060 587 aaPredicted RBP18.27■□□□□ 0.51
CASC19-272ENST00000641991 EFCAB5A4FU69 1503 aa18.23■□□□□ 0.51
CASC19-272ENST00000641991 IQGAP2Q13576 1575 aa18.2■□□□□ 0.5
CASC19-272ENST00000641991 NUP160Q12769 1436 aa18.2■□□□□ 0.5
CASC19-272ENST00000641991 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
CASC19-272ENST00000641991 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
CASC19-272ENST00000641991 SAMD9Q5K651 1589 aa18.18■□□□□ 0.5
CASC19-272ENST00000641991 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
CASC19-272ENST00000641991 UGGT2Q9NYU1 1516 aa18.15■□□□□ 0.5
CASC19-272ENST00000641991 FHOD3Q2V2M9 1422 aa18.13■□□□□ 0.49
CASC19-272ENST00000641991 FBLN2P98095 1184 aa18.12■□□□□ 0.49
CASC19-272ENST00000641991 CHD1O14646 1710 aa18.08■□□□□ 0.48
CASC19-272ENST00000641991 P3H3Q8IVL6 736 aa18.06■□□□□ 0.48
CASC19-272ENST00000641991 DISP1Q96F81 1524 aa18.05■□□□□ 0.48
CASC19-272ENST00000641991 FMN1Q68DA7 1419 aa18.05■□□□□ 0.48
CASC19-272ENST00000641991 PCF11O94913 1555 aaKnown RBP18.04■□□□□ 0.48
CASC19-272ENST00000641991 KIAA0556O60303 1618 aa18.03■□□□□ 0.48
CASC19-272ENST00000641991 FYCO1Q9BQS8 1478 aa18.02■□□□□ 0.48
CASC19-272ENST00000641991 CASKIN1Q8WXD9 1431 aa18.01■□□□□ 0.47
CASC19-272ENST00000641991 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
CASC19-272ENST00000641991 MAP3K1Q13233 1512 aa17.99■□□□□ 0.47
CASC19-272ENST00000641991 TRIM26Q12899 539 aaPredicted RBP17.97■□□□□ 0.47
CASC19-272ENST00000641991 JPH4Q96JJ6 628 aa17.97■□□□□ 0.47
CASC19-272ENST00000641991 APLP2Q06481 763 aa17.96■□□□□ 0.47
CASC19-272ENST00000641991 CLASP1Q7Z460 1538 aa17.96■□□□□ 0.46
CASC19-272ENST00000641991 SHROOM2Q13796 1616 aa17.95■□□□□ 0.46
CASC19-272ENST00000641991 TIAM1Q13009 1591 aa17.94■□□□□ 0.46
CASC19-272ENST00000641991 CARMIL2Q6F5E8 1435 aa17.94■□□□□ 0.46
CASC19-272ENST00000641991 CFAP43Q8NDM7 1665 aa17.92■□□□□ 0.46
CASC19-272ENST00000641991 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
CASC19-272ENST00000641991 PRG4Q92954 1404 aaPredicted RBP17.9■□□□□ 0.46
CASC19-272ENST00000641991 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.45
CASC19-272ENST00000641991 KANK4Q5T7N3 995 aaPredicted RBP17.89■□□□□ 0.45
CASC19-272ENST00000641991 HECW1Q76N89 1606 aa17.87■□□□□ 0.45
CASC19-272ENST00000641991 LRRC9Q6ZRR7 1453 aa17.86■□□□□ 0.45
CASC19-272ENST00000641991 CCDC18Q5T9S5 1454 aa17.83■□□□□ 0.45
CASC19-272ENST00000641991 ATP1B4Q9UN42 357 aaPredicted RBP17.82■□□□□ 0.44
CASC19-272ENST00000641991 LRRIQ1Q96JM4 1722 aa17.82■□□□□ 0.44
CASC19-272ENST00000641991 RAPGEF6Q8TEU7 1601 aa17.82■□□□□ 0.44
CASC19-272ENST00000641991 NUP153P49790 1475 aaKnown RBP17.81■□□□□ 0.44
CASC19-272ENST00000641991 EPRSP07814 1512 aaKnown RBP17.81■□□□□ 0.44
CASC19-272ENST00000641991 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
CASC19-272ENST00000641991 PLB1Q6P1J6 1458 aa17.8■□□□□ 0.44
CASC19-272ENST00000641991 ABCA8O94911 1581 aa17.79■□□□□ 0.44
CASC19-272ENST00000641991 PTPRGP23470 1445 aa17.77■□□□□ 0.44
CASC19-272ENST00000641991 CDK13Q14004 1512 aaKnown RBP17.77■□□□□ 0.44
CASC19-272ENST00000641991 MAGI3Q5TCQ9 1506 aa17.75■□□□□ 0.43
CASC19-272ENST00000641991 EHBP1L1Q8N3D4 1523 aa17.75■□□□□ 0.43
CASC19-272ENST00000641991 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
CASC19-272ENST00000641991 MTUS2Q5JR59 1369 aa17.72■□□□□ 0.43
CASC19-272ENST00000641991 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.43
CASC19-272ENST00000641991 PHLDB1Q86UU1 1377 aa17.7■□□□□ 0.42
CASC19-272ENST00000641991 UACAQ9BZF9 1416 aa17.68■□□□□ 0.42
CASC19-272ENST00000641991 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
CASC19-272ENST00000641991 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
CASC19-272ENST00000641991 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
CASC19-272ENST00000641991 ABCC2Q92887 1545 aa17.65■□□□□ 0.42
CASC19-272ENST00000641991 ATP10BO94823 1461 aa17.65■□□□□ 0.42
CASC19-272ENST00000641991 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
CASC19-272ENST00000641991 SUPT6HQ7KZ85 1726 aaKnown RBP17.63■□□□□ 0.41
CASC19-272ENST00000641991 UHRF1BP1LA0JNW5 1464 aa17.63■□□□□ 0.41
CASC19-272ENST00000641991 TROQ12816 1431 aaPredicted RBP17.62■□□□□ 0.41
CASC19-272ENST00000641991 CDK11AQ9UQ88 783 aaPredicted RBP17.6■□□□□ 0.41
CASC19-272ENST00000641991 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
CASC19-272ENST00000641991 FGD6Q6ZV73 1430 aa17.58■□□□□ 0.4
CASC19-272ENST00000641991 ADCY10Q96PN6 1610 aa17.56■□□□□ 0.4
CASC19-272ENST00000641991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
CASC19-272ENST00000641991 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
CASC19-272ENST00000641991 KDM5BQ9UGL1 1544 aa17.55■□□□□ 0.4
CASC19-272ENST00000641991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.55■□□□□ 0.4
CASC19-272ENST00000641991 KIF14Q15058 1648 aa17.52■□□□□ 0.4
CASC19-272ENST00000641991 PLEKHD1A6NEE1 506 aa17.51■□□□□ 0.39
CASC19-272ENST00000641991 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
CASC19-272ENST00000641991 MIA2Q96PC5 1412 aa17.5■□□□□ 0.39
CASC19-272ENST00000641991 ZCCHC11Q5TAX3 1644 aaKnown RBP17.49■□□□□ 0.39
CASC19-272ENST00000641991 ABCC10Q5T3U5 1492 aa17.49■□□□□ 0.39
CASC19-272ENST00000641991 PTPN23Q9H3S7 1636 aa17.47■□□□□ 0.39
CASC19-272ENST00000641991 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
CASC19-272ENST00000641991 GPATCH8Q9UKJ3 1502 aaKnown RBP17.44■□□□□ 0.38
CASC19-272ENST00000641991 ITSN2Q9NZM3 1697 aa17.42■□□□□ 0.38
CASC19-272ENST00000641991 RIMBP3CA6NJZ7 1639 aa17.4■□□□□ 0.38
CASC19-272ENST00000641991 RIMBP3BA6NNM3 1639 aa17.4■□□□□ 0.38
CASC19-272ENST00000641991 RIMBP3Q9UFD9 1639 aa17.4■□□□□ 0.38
CASC19-272ENST00000641991 TTC37Q6PGP7 1564 aa17.38■□□□□ 0.37
CASC19-272ENST00000641991 WDR7Q9Y4E6 1490 aa17.38■□□□□ 0.37
CASC19-272ENST00000641991 ITGAEP38570 1179 aa17.38■□□□□ 0.37
CASC19-272ENST00000641991 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.37■□□□□ 0.37
CASC19-272ENST00000641991 PTPRKQ15262 1439 aa17.37■□□□□ 0.37
CASC19-272ENST00000641991 CDC42BPAQ5VT25 1732 aa17.36■□□□□ 0.37
CASC19-272ENST00000641991 HRCP23327 699 aa17.36■□□□□ 0.37
CASC19-272ENST00000641991 CAMSAP2Q08AD1 1489 aa17.35■□□□□ 0.37
CASC19-272ENST00000641991 CFDP1Q9UEE9 299 aaPredicted RBP17.35■□□□□ 0.37
CASC19-272ENST00000641991 PREX2Q70Z35 1606 aa17.34■□□□□ 0.37
CASC19-272ENST00000641991 ASXL2Q76L83 1435 aa17.34■□□□□ 0.37
CASC19-272ENST00000641991 ZNF644Q9H582 1327 aaPredicted RBP17.34■□□□□ 0.37
CASC19-272ENST00000641991 DNMT1P26358 1616 aaKnown RBP17.32■□□□□ 0.36
CASC19-272ENST00000641991 DAPK1P53355 1430 aa17.31■□□□□ 0.36
CASC19-272ENST00000641991 ABCC5O15440 1437 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms