RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 JPH4Q96JJ6 628 aa25.54■■□□□ 1.68
PHGDH-231ENST00000641939 KIAA0586Q9BVV6 1533 aa25.53■■□□□ 1.68
PHGDH-231ENST00000641939 PRG4Q92954 1404 aaPredicted RBP25.52■■□□□ 1.68
PHGDH-231ENST00000641939 RAPGEF2Q9Y4G8 1499 aa25.45■■□□□ 1.66
PHGDH-231ENST00000641939 IQGAP2Q13576 1575 aa25.38■■□□□ 1.65
PHGDH-231ENST00000641939 TRHP20396 242 aaPredicted RBP25.31■■□□□ 1.64
PHGDH-231ENST00000641939 PRXQ9BXM0 1461 aa25.31■■□□□ 1.64
PHGDH-231ENST00000641939 CTTNBP2Q8WZ74 1663 aa25.28■■□□□ 1.64
PHGDH-231ENST00000641939 CARMIL2Q6F5E8 1435 aa25.27■■□□□ 1.64
PHGDH-231ENST00000641939 EEA1Q15075 1411 aa25.25■■□□□ 1.63
PHGDH-231ENST00000641939 CSRNP3Q8WYN3 585 aa25.23■■□□□ 1.63
PHGDH-231ENST00000641939 UGGT2Q9NYU1 1516 aa25.22■■□□□ 1.63
PHGDH-231ENST00000641939 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
PHGDH-231ENST00000641939 TNIKQ9UKE5 1360 aa25.19■■□□□ 1.62
PHGDH-231ENST00000641939 DISP1Q96F81 1524 aa25.19■■□□□ 1.62
PHGDH-231ENST00000641939 PTPRGP23470 1445 aa25.19■■□□□ 1.62
PHGDH-231ENST00000641939 ADCY10Q96PN6 1610 aa25.19■■□□□ 1.62
PHGDH-231ENST00000641939 KIAA0556O60303 1618 aa25.13■■□□□ 1.61
PHGDH-231ENST00000641939 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
PHGDH-231ENST00000641939 NPM1P06748 294 aaKnown RBP eCLIP25.12■■□□□ 1.61
PHGDH-231ENST00000641939 FAM9AQ8IZU1 332 aaPredicted RBP25.1■■□□□ 1.61
PHGDH-231ENST00000641939 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
PHGDH-231ENST00000641939 MAPKBP1O60336 1514 aa25.06■■□□□ 1.6
PHGDH-231ENST00000641939 KIF13AQ9H1H9 1805 aa25.03■■□□□ 1.6
PHGDH-231ENST00000641939 KIF21BO75037 1637 aa25.02■■□□□ 1.6
PHGDH-231ENST00000641939 UACAQ9BZF9 1416 aa25.02■■□□□ 1.6
PHGDH-231ENST00000641939 UHRF1BP1LA0JNW5 1464 aa25.01■■□□□ 1.59
PHGDH-231ENST00000641939 ABCC2Q92887 1545 aa25■■□□□ 1.59
PHGDH-231ENST00000641939 ABCC10Q5T3U5 1492 aa24.95■■□□□ 1.58
PHGDH-231ENST00000641939 DIP2BQ9P265 1576 aa24.93■■□□□ 1.58
PHGDH-231ENST00000641939 SAMD9Q5K651 1589 aa24.91■■□□□ 1.58
PHGDH-231ENST00000641939 FAM69CQ0P6D2 419 aa24.9■■□□□ 1.58
PHGDH-231ENST00000641939 KDM5BQ9UGL1 1544 aa24.89■■□□□ 1.57
PHGDH-231ENST00000641939 PLB1Q6P1J6 1458 aa24.89■■□□□ 1.57
PHGDH-231ENST00000641939 ABCA8O94911 1581 aa24.87■■□□□ 1.57
PHGDH-231ENST00000641939 ZCCHC11Q5TAX3 1644 aaKnown RBP24.86■■□□□ 1.57
PHGDH-231ENST00000641939 P3H3Q8IVL6 736 aa24.86■■□□□ 1.57
PHGDH-231ENST00000641939 ASXL2Q76L83 1435 aa24.85■■□□□ 1.57
PHGDH-231ENST00000641939 RANGAP1P46060 587 aaPredicted RBP24.8■■□□□ 1.56
PHGDH-231ENST00000641939 EHMT2Q96KQ7 1210 aa24.79■■□□□ 1.56
PHGDH-231ENST00000641939 UBTFP17480 764 aaKnown RBP24.78■■□□□ 1.56
PHGDH-231ENST00000641939 TSPOAP1O95153 1857 aa24.78■■□□□ 1.56
PHGDH-231ENST00000641939 EFCAB5A4FU69 1503 aa24.76■■□□□ 1.55
PHGDH-231ENST00000641939 GLI2P10070 1586 aa24.75■■□□□ 1.55
PHGDH-231ENST00000641939 FHOD3Q2V2M9 1422 aa24.73■■□□□ 1.55
PHGDH-231ENST00000641939 RAPGEF6Q8TEU7 1601 aa24.72■■□□□ 1.55
PHGDH-231ENST00000641939 EPRSP07814 1512 aaKnown RBP24.71■■□□□ 1.55
PHGDH-231ENST00000641939 WDR7Q9Y4E6 1490 aa24.7■■□□□ 1.54
PHGDH-231ENST00000641939 ATP10BO94823 1461 aa24.65■■□□□ 1.54
PHGDH-231ENST00000641939 MAP3K4Q9Y6R4 1608 aa24.64■■□□□ 1.53
PHGDH-231ENST00000641939 PPRC1Q5VV67 1664 aaKnown RBP24.63■■□□□ 1.53
PHGDH-231ENST00000641939 ARID3CA6NKF2 412 aa24.63■■□□□ 1.53
PHGDH-231ENST00000641939 NUP153P49790 1475 aaKnown RBP24.59■■□□□ 1.53
PHGDH-231ENST00000641939 ARHGAP35Q9NRY4 1499 aa24.59■■□□□ 1.53
PHGDH-231ENST00000641939 KDM6BO15054 1643 aa24.58■■□□□ 1.53
PHGDH-231ENST00000641939 KCNH8Q96L42 1107 aa24.57■■□□□ 1.52
PHGDH-231ENST00000641939 CFAP43Q8NDM7 1665 aa24.56■■□□□ 1.52
PHGDH-231ENST00000641939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.53■■□□□ 1.52
PHGDH-231ENST00000641939 HNRNPUL2Q1KMD3 747 aaKnown RBP24.53■■□□□ 1.52
PHGDH-231ENST00000641939 FMN1Q68DA7 1419 aa24.52■■□□□ 1.52
PHGDH-231ENST00000641939 TEX14Q8IWB6 1497 aa24.52■■□□□ 1.52
PHGDH-231ENST00000641939 CD109Q6YHK3 1445 aa24.49■■□□□ 1.51
PHGDH-231ENST00000641939 MAGI3Q5TCQ9 1506 aa24.46■■□□□ 1.51
PHGDH-231ENST00000641939 HECW1Q76N89 1606 aa24.45■■□□□ 1.5
PHGDH-231ENST00000641939 ABCA9Q8IUA7 1624 aa24.45■■□□□ 1.5
PHGDH-231ENST00000641939 PLEKHD1A6NEE1 506 aa24.42■■□□□ 1.5
PHGDH-231ENST00000641939 CDK13Q14004 1512 aaKnown RBP24.41■■□□□ 1.5
PHGDH-231ENST00000641939 ATP1B4Q9UN42 357 aaPredicted RBP24.39■■□□□ 1.49
PHGDH-231ENST00000641939 CLIP1P30622 1438 aa24.38■■□□□ 1.49
PHGDH-231ENST00000641939 COL17A1Q9UMD9 1497 aaPredicted RBP24.38■■□□□ 1.49
PHGDH-231ENST00000641939 LRRIQ1Q96JM4 1722 aa24.34■■□□□ 1.49
PHGDH-231ENST00000641939 PCF11O94913 1555 aaKnown RBP24.32■■□□□ 1.48
PHGDH-231ENST00000641939 CASKIN1Q8WXD9 1431 aa24.31■■□□□ 1.48
PHGDH-231ENST00000641939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.29■■□□□ 1.48
PHGDH-231ENST00000641939 AEBP2Q6ZN18 517 aaPredicted RBP24.28■■□□□ 1.48
PHGDH-231ENST00000641939 CDK11AQ9UQ88 783 aaPredicted RBP24.28■■□□□ 1.48
PHGDH-231ENST00000641939 TTC37Q6PGP7 1564 aa24.26■■□□□ 1.47
PHGDH-231ENST00000641939 PHLDB1Q86UU1 1377 aa24.26■■□□□ 1.47
PHGDH-231ENST00000641939 ARAP3Q8WWN8 1544 aa24.25■■□□□ 1.47
PHGDH-231ENST00000641939 NEO1Q92859 1461 aa24.25■■□□□ 1.47
PHGDH-231ENST00000641939 FYCO1Q9BQS8 1478 aa24.25■■□□□ 1.47
PHGDH-231ENST00000641939 CCDC18Q5T9S5 1454 aa24.24■■□□□ 1.47
PHGDH-231ENST00000641939 CEP162Q5TB80 1403 aa24.23■■□□□ 1.47
PHGDH-231ENST00000641939 TROQ12816 1431 aaPredicted RBP24.2■■□□□ 1.46
PHGDH-231ENST00000641939 CFAP74Q9C0B2 1584 aa24.2■■□□□ 1.46
PHGDH-231ENST00000641939 KIF14Q15058 1648 aa24.19■■□□□ 1.46
PHGDH-231ENST00000641939 LOC105371045A0A1W2PR82 267 aa24.18■■□□□ 1.46
PHGDH-231ENST00000641939 MYO5CQ9NQX4 1742 aa24.17■■□□□ 1.46
PHGDH-231ENST00000641939 FANCAO15360 1455 aa24.17■■□□□ 1.46
PHGDH-231ENST00000641939 PLCH2O75038 1416 aa24.13■■□□□ 1.45
PHGDH-231ENST00000641939 AKNAQ7Z591 1439 aa24.13■■□□□ 1.45
PHGDH-231ENST00000641939 RAPGEF3O95398 923 aa24.11■■□□□ 1.45
PHGDH-231ENST00000641939 FRMPD1Q5SYB0 1578 aa24.09■■□□□ 1.45
PHGDH-231ENST00000641939 RICTORQ6R327 1708 aa24.08■■□□□ 1.45
PHGDH-231ENST00000641939 DENND4BO75064 1496 aaPredicted RBP24.07■■□□□ 1.44
PHGDH-231ENST00000641939 KDM4FA0A1W2PPD8 638 aa24.06■■□□□ 1.44
PHGDH-231ENST00000641939 EFCAB2Q5VUJ9 269 aa24.04■■□□□ 1.44
PHGDH-231ENST00000641939 ADGRL1O94910 1474 aa24.03■■□□□ 1.44
PHGDH-231ENST00000641939 CDC42BPBQ9Y5S2 1711 aa24.03■■□□□ 1.44
PHGDH-231ENST00000641939 ARHGAP5Q13017 1502 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms