RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PCF11O94913 1555 aaKnown RBP25.43■■□□□ 1.66
PHGDH-229ENST00000641891 FHOD3Q2V2M9 1422 aa25.43■■□□□ 1.66
PHGDH-229ENST00000641891 MAP3K1Q13233 1512 aa25.41■■□□□ 1.66
PHGDH-229ENST00000641891 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
PHGDH-229ENST00000641891 FHAD1B1AJZ9 1412 aa25.4■■□□□ 1.66
PHGDH-229ENST00000641891 EFCAB5A4FU69 1503 aa25.38■■□□□ 1.65
PHGDH-229ENST00000641891 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
PHGDH-229ENST00000641891 LRRC9Q6ZRR7 1453 aa25.35■■□□□ 1.65
PHGDH-229ENST00000641891 CFAP43Q8NDM7 1665 aa25.35■■□□□ 1.65
PHGDH-229ENST00000641891 ATP1B4Q9UN42 357 aaPredicted RBP25.31■■□□□ 1.64
PHGDH-229ENST00000641891 MRC2Q9UBG0 1479 aa25.3■■□□□ 1.64
PHGDH-229ENST00000641891 FYCO1Q9BQS8 1478 aa25.28■■□□□ 1.64
PHGDH-229ENST00000641891 ITGAEP38570 1179 aa25.26■■□□□ 1.63
PHGDH-229ENST00000641891 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
PHGDH-229ENST00000641891 CASKIN1Q8WXD9 1431 aa25.25■■□□□ 1.63
PHGDH-229ENST00000641891 DHX57Q6P158 1386 aaKnown RBP25.25■■□□□ 1.63
PHGDH-229ENST00000641891 PHLDB1Q86UU1 1377 aa25.25■■□□□ 1.63
PHGDH-229ENST00000641891 AQRO60306 1485 aaKnown RBP eCLIP25.23■■□□□ 1.631e-6■■□□□ 14.4
PHGDH-229ENST00000641891 SAMD9Q5K651 1589 aa25.23■■□□□ 1.63
PHGDH-229ENST00000641891 DIEXFQ68CQ4 756 aaKnown RBP25.2■■□□□ 1.62
PHGDH-229ENST00000641891 SNAPC4Q5SXM2 1469 aa25.19■■□□□ 1.62
PHGDH-229ENST00000641891 FMN1Q68DA7 1419 aa25.19■■□□□ 1.62
PHGDH-229ENST00000641891 ZNF316A6NFI3 1004 aaPredicted RBP25.16■■□□□ 1.62
PHGDH-229ENST00000641891 ADAMTS12P58397 1594 aa25.14■■□□□ 1.62
PHGDH-229ENST00000641891 WDR62O43379 1518 aa25.12■■□□□ 1.61
PHGDH-229ENST00000641891 ZNF608Q9ULD9 1512 aaPredicted RBP25.11■■□□□ 1.61
PHGDH-229ENST00000641891 LRRIQ1Q96JM4 1722 aa25.11■■□□□ 1.61
PHGDH-229ENST00000641891 CLSPNQ9HAW4 1339 aa25.1■■□□□ 1.61
PHGDH-229ENST00000641891 FAM50AQ14320 339 aaKnown RBP25.1■■□□□ 1.61
PHGDH-229ENST00000641891 GRIN2BQ13224 1484 aa25.08■■□□□ 1.61
PHGDH-229ENST00000641891 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
PHGDH-229ENST00000641891 RAB3GAP2Q9H2M9 1393 aa25.06■■□□□ 1.6
PHGDH-229ENST00000641891 IQGAP2Q13576 1575 aa25.03■■□□□ 1.6
PHGDH-229ENST00000641891 MTUS2Q5JR59 1369 aa24.99■■□□□ 1.59
PHGDH-229ENST00000641891 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
PHGDH-229ENST00000641891 SETD5Q9C0A6 1442 aa24.99■■□□□ 1.59
PHGDH-229ENST00000641891 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
PHGDH-229ENST00000641891 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.58
PHGDH-229ENST00000641891 FGD6Q6ZV73 1430 aa24.94■■□□□ 1.58
PHGDH-229ENST00000641891 MAPKBP1O60336 1514 aa24.92■■□□□ 1.58
PHGDH-229ENST00000641891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.9■■□□□ 1.58
PHGDH-229ENST00000641891 NCOA2Q15596 1464 aa24.9■■□□□ 1.58
PHGDH-229ENST00000641891 MAGI3Q5TCQ9 1506 aa24.9■■□□□ 1.58
PHGDH-229ENST00000641891 EHBP1L1Q8N3D4 1523 aa24.88■■□□□ 1.57
PHGDH-229ENST00000641891 SUPT6HQ7KZ85 1726 aaKnown RBP24.87■■□□□ 1.57
PHGDH-229ENST00000641891 UGGT2Q9NYU1 1516 aa24.87■■□□□ 1.57
PHGDH-229ENST00000641891 HECW1Q76N89 1606 aa24.86■■□□□ 1.57
PHGDH-229ENST00000641891 CCDC18Q5T9S5 1454 aa24.84■■□□□ 1.57
PHGDH-229ENST00000641891 MYOM3Q5VTT5 1437 aa24.83■■□□□ 1.57
PHGDH-229ENST00000641891 GRIN2AQ12879 1464 aa24.83■■□□□ 1.57
PHGDH-229ENST00000641891 KIAA0586Q9BVV6 1533 aa24.81■■□□□ 1.56
PHGDH-229ENST00000641891 EPRSP07814 1512 aaKnown RBP24.8■■□□□ 1.56
PHGDH-229ENST00000641891 CDK13Q14004 1512 aaKnown RBP24.8■■□□□ 1.56
PHGDH-229ENST00000641891 PTPRKQ15262 1439 aa24.8■■□□□ 1.56
PHGDH-229ENST00000641891 ARHGEF11O15085 1522 aa24.79■■□□□ 1.56
PHGDH-229ENST00000641891 ARID3CA6NKF2 412 aa24.78■■□□□ 1.56
PHGDH-229ENST00000641891 KIAA0556O60303 1618 aa24.78■■□□□ 1.56
PHGDH-229ENST00000641891 DISP1Q96F81 1524 aa24.78■■□□□ 1.56
PHGDH-229ENST00000641891 PTPN23Q9H3S7 1636 aa24.75■■□□□ 1.55
PHGDH-229ENST00000641891 MIER1Q8N108 512 aa24.74■■□□□ 1.55
PHGDH-229ENST00000641891 MAGI1Q96QZ7 1491 aaPredicted RBP24.74■■□□□ 1.55
PHGDH-229ENST00000641891 SCAF1Q9H7N4 1312 aaKnown RBP24.73■■□□□ 1.55
PHGDH-229ENST00000641891 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
PHGDH-229ENST00000641891 SIN3AQ96ST3 1273 aa24.7■■□□□ 1.55
PHGDH-229ENST00000641891 SYNJ2O15056 1496 aa24.69■■□□□ 1.54
PHGDH-229ENST00000641891 NEUROD1Q13562 356 aa24.69■■□□□ 1.54
PHGDH-229ENST00000641891 CHMP7Q8WUX9 453 aaPredicted RBP24.69■■□□□ 1.54
PHGDH-229ENST00000641891 HFM1A2PYH4 1435 aa24.68■■□□□ 1.54
PHGDH-229ENST00000641891 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
PHGDH-229ENST00000641891 FBLN2P98095 1184 aa24.66■■□□□ 1.54
PHGDH-229ENST00000641891 NUP153P49790 1475 aaKnown RBP24.64■■□□□ 1.53
PHGDH-229ENST00000641891 TCOF1Q13428 1488 aaKnown RBP24.64■■□□□ 1.53
PHGDH-229ENST00000641891 NAIPQ13075 1403 aa24.64■■□□□ 1.53
PHGDH-229ENST00000641891 RAPGEF6Q8TEU7 1601 aa24.63■■□□□ 1.53
PHGDH-229ENST00000641891 CENPBP07199 599 aaPredicted RBP24.58■■□□□ 1.53
PHGDH-229ENST00000641891 NUP160Q12769 1436 aa24.56■■□□□ 1.52
PHGDH-229ENST00000641891 YTHDC1Q96MU7 727 aaKnown RBP24.56■■□□□ 1.52
PHGDH-229ENST00000641891 UACAQ9BZF9 1416 aa24.56■■□□□ 1.52
PHGDH-229ENST00000641891 CHIC2Q9UKJ5 165 aa24.56■■□□□ 1.52
PHGDH-229ENST00000641891 MIA2Q96PC5 1412 aa24.54■■□□□ 1.52
PHGDH-229ENST00000641891 RRP7BPQ9NSQ0 103 aa24.54■■□□□ 1.52
PHGDH-229ENST00000641891 PLB1Q6P1J6 1458 aa24.53■■□□□ 1.52
PHGDH-229ENST00000641891 GCC2Q8IWJ2 1684 aa24.51■■□□□ 1.51
PHGDH-229ENST00000641891 JPH4Q96JJ6 628 aa24.5■■□□□ 1.51
PHGDH-229ENST00000641891 KDM6BO15054 1643 aa24.48■■□□□ 1.51
PHGDH-229ENST00000641891 CARMIL2Q6F5E8 1435 aa24.46■■□□□ 1.51
PHGDH-229ENST00000641891 PRG4Q92954 1404 aaPredicted RBP24.46■■□□□ 1.51
PHGDH-229ENST00000641891 TIMELESSQ9UNS1 1208 aa24.45■■□□□ 1.5
PHGDH-229ENST00000641891 CDK11AQ9UQ88 783 aaPredicted RBP24.43■■□□□ 1.5
PHGDH-229ENST00000641891 AKNAQ7Z591 1439 aa24.43■■□□□ 1.5
PHGDH-229ENST00000641891 ZNF644Q9H582 1327 aaPredicted RBP24.42■■□□□ 1.5
PHGDH-229ENST00000641891 PPP1R15AO75807 674 aaPredicted RBP24.42■■□□□ 1.5
PHGDH-229ENST00000641891 TROQ12816 1431 aaPredicted RBP24.41■■□□□ 1.5
PHGDH-229ENST00000641891 DAPK1P53355 1430 aa24.4■■□□□ 1.5
PHGDH-229ENST00000641891 TONSLQ96HA7 1378 aa24.38■■□□□ 1.49
PHGDH-229ENST00000641891 DNMT1P26358 1616 aaKnown RBP24.38■■□□□ 1.49
PHGDH-229ENST00000641891 KIF14Q15058 1648 aa24.38■■□□□ 1.49
PHGDH-229ENST00000641891 DENND4BO75064 1496 aaPredicted RBP24.37■■□□□ 1.49
PHGDH-229ENST00000641891 ABCC5O15440 1437 aa24.37■■□□□ 1.49
PHGDH-229ENST00000641891 TRIM52Q96A61 297 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms